RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 NPCDR1Q9BY65 106 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 UBE2ZQ9H832 354 aaPredicted RBP11.99□□□□□ -0.49
SRP54-202ENST00000546080 AURKAIP1Q9NWT8 199 aaPredicted RBP11.99□□□□□ -0.49
SRP54-202ENST00000546080 CLN8Q9UBY8 286 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 HSPB7Q9UBY9 170 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 GOLT1BQ9Y3E0 138 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 A0A096LPE4 126 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 A0A0G2JMM0 328 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 A0A1W2PPB8 328 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 A0A1W2PPZ6 126 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 A0A1W2PRS3 328 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 KIR3DP1A8MWS1 328 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 C3orf80F5H4A9 247 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 PDE6DO43924 150 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 CRYAAP02489 173 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 EGR1P18146 543 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 CDC34P49427 236 aaPredicted RBP11.99□□□□□ -0.49
SRP54-202ENST00000546080 NRN1LQ496H8 165 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 TOMM20LQ6UXN7 152 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 NUFIP2Q7Z417 695 aaKnown RBP11.99□□□□□ -0.49
SRP54-202ENST00000546080 DRAM1Q8N682 238 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 UBALD1Q8TB05 177 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 OCIAD1Q9NX40 245 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 TRAPPC2LQ9UL33 140 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 A6NNC1 897 aa11.98□□□□□ -0.49
SRP54-202ENST00000546080 C17orf112F2Z3M2 114 aa11.98□□□□□ -0.49
SRP54-202ENST00000546080 TMPRSS2O15393 492 aa11.98□□□□□ -0.49
SRP54-202ENST00000546080 P04436 131 aa11.98□□□□□ -0.49
SRP54-202ENST00000546080 UMODP07911 640 aa11.98□□□□□ -0.49
SRP54-202ENST00000546080 ADMP35318 185 aa11.98□□□□□ -0.49
SRP54-202ENST00000546080 UBE2NP61088 152 aaKnown RBP11.98□□□□□ -0.49
SRP54-202ENST00000546080 ARF1P84077 181 aaKnown RBP11.98□□□□□ -0.49
SRP54-202ENST00000546080 MSMO1Q15800 293 aa11.98□□□□□ -0.49
SRP54-202ENST00000546080 OR5P3Q8WZ94 311 aa11.98□□□□□ -0.49
SRP54-202ENST00000546080 PARD6AQ9NPB6 346 aa11.98□□□□□ -0.49
SRP54-202ENST00000546080 EYSQ5T1H1 3165 aa11.98□□□□□ -0.49
SRP54-202ENST00000546080 ANKRD30BLA7E2S9 258 aa11.98□□□□□ -0.49
SRP54-202ENST00000546080 TRAPPC6AO75865 159 aa11.98□□□□□ -0.49
SRP54-202ENST00000546080 C1QTNF9P0C862 333 aa11.98□□□□□ -0.49
SRP54-202ENST00000546080 DEFA4P12838 97 aa11.98□□□□□ -0.49
SRP54-202ENST00000546080 MLF1P58340 268 aa11.98□□□□□ -0.49
SRP54-202ENST00000546080 GNB1P62873 340 aa11.98□□□□□ -0.49
SRP54-202ENST00000546080 FOXL1Q12952 345 aa11.98□□□□□ -0.49
SRP54-202ENST00000546080 WIPI1Q5MNZ9 446 aaPredicted RBP11.98□□□□□ -0.49
SRP54-202ENST00000546080 TMEM106BQ9NUM4 274 aa11.98□□□□□ -0.49
SRP54-202ENST00000546080 ELOVL5Q9NYP7 299 aa11.98□□□□□ -0.49
SRP54-202ENST00000546080 MDFIC2A0A1B0GVS7 189 aa11.97□□□□□ -0.49
SRP54-202ENST00000546080 PMS2P5A8MQ11 134 aa11.97□□□□□ -0.49
SRP54-202ENST00000546080 MRPL33O75394 65 aaKnown RBP11.97□□□□□ -0.49
SRP54-202ENST00000546080 G6PCP35575 357 aa11.97□□□□□ -0.49
SRP54-202ENST00000546080 SOX8P57073 446 aa11.97□□□□□ -0.49
SRP54-202ENST00000546080 TPPP2P59282 170 aa11.97□□□□□ -0.49
SRP54-202ENST00000546080 UBE2G2P60604 165 aa11.97□□□□□ -0.49
SRP54-202ENST00000546080 RPS16P62249 146 aaKnown RBP11.97□□□□□ -0.49
SRP54-202ENST00000546080 GNG3P63215 75 aa11.97□□□□□ -0.49
SRP54-202ENST00000546080 GAGE1Q13065 139 aa11.97□□□□□ -0.49
SRP54-202ENST00000546080 TCF23Q7RTU1 214 aa11.97□□□□□ -0.49
SRP54-202ENST00000546080 SGMS2Q8NHU3 365 aa11.97□□□□□ -0.49
SRP54-202ENST00000546080 PRDM6Q9NQX0 595 aa11.97□□□□□ -0.49
SRP54-202ENST00000546080 GRIFINA4D1Z8 144 aa11.96□□□□□ -0.49
SRP54-202ENST00000546080 GDF9O60383 454 aa11.96□□□□□ -0.49
SRP54-202ENST00000546080 NDUFB4O95168 129 aa11.96□□□□□ -0.49
SRP54-202ENST00000546080 KRASP01116 189 aa11.96□□□□□ -0.49
SRP54-202ENST00000546080 SERPINA7P05543 415 aa11.96□□□□□ -0.49
SRP54-202ENST00000546080 RFPL3SP0C7P2 107 aa11.96□□□□□ -0.49
SRP54-202ENST00000546080 BMP5P22003 454 aa11.96□□□□□ -0.49
SRP54-202ENST00000546080 ATP5G3P48201 142 aa11.96□□□□□ -0.49
SRP54-202ENST00000546080 RAB30Q15771 203 aa11.96□□□□□ -0.49
SRP54-202ENST00000546080 LRP11Q86VZ4 500 aa11.96□□□□□ -0.49
SRP54-202ENST00000546080 OR1L1Q8NH94 360 aa11.96□□□□□ -0.49
SRP54-202ENST00000546080 DTD1Q8TEA8 209 aa11.96□□□□□ -0.49
SRP54-202ENST00000546080 SFRP2Q96HF1 295 aa11.96□□□□□ -0.49
SRP54-202ENST00000546080 MIEN1Q9BRT3 115 aa11.96□□□□□ -0.49
SRP54-202ENST00000546080 KCNIP2Q9NS61 270 aa11.96□□□□□ -0.49
SRP54-202ENST00000546080 ODAMA1E959 279 aa11.96□□□□□ -0.5
SRP54-202ENST00000546080 OR5B21A6NL26 309 aa11.96□□□□□ -0.5
SRP54-202ENST00000546080 LRRC30A6NM36 301 aa11.96□□□□□ -0.5
SRP54-202ENST00000546080 F6UZH7 168 aa11.96□□□□□ -0.5
SRP54-202ENST00000546080 SIRPB1O00241 398 aa11.96□□□□□ -0.5
SRP54-202ENST00000546080 TNFSF13O75888 250 aa11.96□□□□□ -0.5
SRP54-202ENST00000546080 NGFP01138 241 aa11.96□□□□□ -0.5
SRP54-202ENST00000546080 CRYABP02511 175 aaKnown RBP11.96□□□□□ -0.5
SRP54-202ENST00000546080 NPSP0C0P6 89 aa11.96□□□□□ -0.5
SRP54-202ENST00000546080 IRF2P14316 349 aa11.96□□□□□ -0.5
SRP54-202ENST00000546080 ZNF816Q0VGE8 651 aaPredicted RBP11.96□□□□□ -0.5
SRP54-202ENST00000546080 TMEM183BQ1AE95 376 aa11.96□□□□□ -0.5
SRP54-202ENST00000546080 AGBL5Q8NDL9 886 aa11.96□□□□□ -0.5
SRP54-202ENST00000546080 TMEM45BQ96B21 275 aa11.96□□□□□ -0.5
SRP54-202ENST00000546080 C20orf144Q9BQM9 153 aa11.96□□□□□ -0.5
SRP54-202ENST00000546080 DERL1Q9BUN8 251 aa11.96□□□□□ -0.5
SRP54-202ENST00000546080 PRRG4Q9BZD6 226 aa11.96□□□□□ -0.5
SRP54-202ENST00000546080 ZDHHC11Q9H8X9 412 aa11.96□□□□□ -0.5
SRP54-202ENST00000546080 RYDENQ9NUL5 291 aaKnown RBP11.96□□□□□ -0.5
SRP54-202ENST00000546080 ASCC3Q8N3C0 2202 aaKnown RBP11.96□□□□□ -0.5
SRP54-202ENST00000546080 TNRC6AQ8NDV7 1962 aaKnown RBP11.95□□□□□ -0.5
SRP54-202ENST00000546080 ZG16O60844 167 aa11.95□□□□□ -0.5
SRP54-202ENST00000546080 RAMP3O60896 148 aa11.95□□□□□ -0.5
SRP54-202ENST00000546080 RHBDL1O75783 438 aa11.95□□□□□ -0.5
SRP54-202ENST00000546080 PAFAH1B2P68402 229 aa11.95□□□□□ -0.5
SRP54-202ENST00000546080 Q6P435 159 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms