RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 HLA-DQA2P01906 255 aa5.72□□□□□ -1.49
NECAP1-208ENST00000545807 SERPINA7P05543 415 aa5.72□□□□□ -1.49
NECAP1-208ENST00000545807 FAM87AP0C7U9 286 aa5.72□□□□□ -1.49
NECAP1-208ENST00000545807 ZNF43P17038 809 aa5.72□□□□□ -1.49
NECAP1-208ENST00000545807 PIGPP57054 158 aa5.72□□□□□ -1.49
NECAP1-208ENST00000545807 LCN2P80188 198 aa5.72□□□□□ -1.49
NECAP1-208ENST00000545807 PCOLCEQ15113 449 aa5.72□□□□□ -1.49
NECAP1-208ENST00000545807 ANKRD55Q3KP44 614 aa5.72□□□□□ -1.49
NECAP1-208ENST00000545807 STAC2Q6ZMT1 411 aa5.72□□□□□ -1.49
NECAP1-208ENST00000545807 C16orf82Q7Z2V1 217 aa5.72□□□□□ -1.49
NECAP1-208ENST00000545807 RFLNBQ8N5W9 214 aa5.72□□□□□ -1.49
NECAP1-208ENST00000545807 SUMF1Q8NBK3 374 aa5.72□□□□□ -1.49
NECAP1-208ENST00000545807 GALMQ96C23 342 aa5.72□□□□□ -1.49
NECAP1-208ENST00000545807 MBD6Q96DN6 1003 aa5.72□□□□□ -1.49
NECAP1-208ENST00000545807 RBMXL1Q96E39 390 aaKnown RBP5.72□□□□□ -1.49
NECAP1-208ENST00000545807 DERL1Q9BUN8 251 aa5.72□□□□□ -1.49
NECAP1-208ENST00000545807 PLA2G3Q9NZ20 509 aa5.72□□□□□ -1.49
NECAP1-208ENST00000545807 HHLA2Q9UM44 414 aa5.72□□□□□ -1.49
NECAP1-208ENST00000545807 PXMP4Q9Y6I8 212 aa5.72□□□□□ -1.49
NECAP1-208ENST00000545807 COL6A6A6NMZ7 2263 aa5.71□□□□□ -1.49
NECAP1-208ENST00000545807 ICE1Q9Y2F5 2266 aa5.71□□□□□ -1.49
NECAP1-208ENST00000545807 PRR14LQ5THK1 2151 aa5.71□□□□□ -1.49
NECAP1-208ENST00000545807 ADAMTS20P59510 1910 aa5.71□□□□□ -1.49
NECAP1-208ENST00000545807 TRAV8-7A0A075B6U6 113 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 GAGE12HA6NDE8 117 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 NPIPB7O75200 414 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 DEDDO75618 318 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 RAD51DO75771 328 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 NDUFB2O95178 105 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 CNIH1O95406 144 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 CCL3P10147 92 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 PGCP20142 388 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 SLC6A6P31641 620 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 DNASE1L1P49184 302 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 ZNF585BQ52M93 769 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 CDCP2Q5VXM1 449 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 RPS19BP1Q86WX3 136 aaKnown RBP5.71□□□□□ -1.5
NECAP1-208ENST00000545807 SLC25A40Q8TBP6 338 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 EMC6Q9BV81 110 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 SH3BGRL3Q9H299 93 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 MRPL16Q9NX20 251 aaKnown RBP5.71□□□□□ -1.5
NECAP1-208ENST00000545807 RNF114Q9Y508 228 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 FREM1Q5H8C1 2179 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 ZFHX4Q86UP3 3567 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 SPTAN1Q13813 2472 aaKnown RBP5.71□□□□□ -1.5
NECAP1-208ENST00000545807 SFT2D2O95562 160 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 CYB5AP00167 134 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 DBHP09172 617 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 COX6A1P12074 109 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 HLA-DOBP13765 273 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 SRP14P37108 136 aaKnown RBP5.71□□□□□ -1.5
NECAP1-208ENST00000545807 CDKN2AP42771 156 aaKnown RBP5.71□□□□□ -1.5
NECAP1-208ENST00000545807 GALR1P47211 349 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 EFNB2P52799 333 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 RPL18Q07020 188 aaKnown RBP5.71□□□□□ -1.5
NECAP1-208ENST00000545807 EIF2B1Q14232 305 aaKnown RBP5.71□□□□□ -1.5
NECAP1-208ENST00000545807 ZNF266Q14584 549 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 ALG10Q5BKT4 473 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 BVES-AS1Q5T3Y7 98 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 ABHD17BQ5VST6 288 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 FNDC7Q5VTL7 733 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 PLXDC2Q6UX71 529 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 FOXI2Q6ZQN5 318 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 SLC16A9Q7RTY1 509 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 GPR82Q96P67 336 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 AGMATQ9BSE5 352 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 NPFFR1Q9GZQ6 430 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 MTCH1Q9NZJ7 389 aa5.71□□□□□ -1.5
NECAP1-208ENST00000545807 MRM2Q9UI43 246 aaKnown RBP5.71□□□□□ -1.5
NECAP1-208ENST00000545807 UBE2J1Q9Y385 318 aaPredicted RBP5.71□□□□□ -1.5
NECAP1-208ENST00000545807 IGHV1-45A0A0A0MS14 117 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 TRBV2A0A0J9YWF9 115 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 CEACAM18A8MTB9 384 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 SNAI2O43623 268 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 TACSTD2P09758 323 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 SRD5A2P31213 254 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 GAGE5Q13069 117 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 GAGE6Q13070 117 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 ZNF74Q16587 644 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 KIAA1644Q3SXP7 199 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 C5orf47Q569G3 176 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 CARD17Q5XLA6 110 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 GTF2H5Q6ZYL4 71 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 DOLPP1Q86YN1 238 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 SMIM20Q8N5G0 67 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 ZNF441Q8N8Z8 693 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 RNF128Q8TEB7 428 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 TM2D1Q9BX74 207 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 MED29Q9NX70 200 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 ZNF391Q9UJN7 358 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 ERG28Q9UKR5 140 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 POLEQ07864 2286 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.7□□□□□ -1.5
NECAP1-208ENST00000545807 IGHV3-15A0A0B4J1V0 119 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 LOC101059948A0A1B0GTJ6 334 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 TCF15Q12870 199 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 MSMO1Q15800 293 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 PCK2Q16822 640 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 TMEM128Q5BJH2 165 aa5.7□□□□□ -1.5
NECAP1-208ENST00000545807 PPP1R32Q7Z5V6 425 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms