RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 CX3CL1P78423 397 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 NDPQ00604 133 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 LIPEQ05469 1076 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 MICAQ29983 383 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 DEFB114Q30KQ6 69 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 RSBN1Q5VWQ0 802 aaPredicted RBP3.01□□□□□ -1.93
SNHG1-220ENST00000544550 PVRIGQ6DKI7 326 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 ZNF343Q6P1L6 599 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 Q6P435 159 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 ZNF562Q6V9R5 426 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 SAXO1Q8IYX7 474 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 ZNF645Q8N7E2 425 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 OR8D4Q8NGM9 314 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 THRSPQ92748 146 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 RPL36ALQ969Q0 106 aaKnown RBP3.01□□□□□ -1.93
SNHG1-220ENST00000544550 TMEM68Q96MH6 324 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 RDH12Q96NR8 316 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 KCTD14Q9BQ13 255 aaPredicted RBP3.01□□□□□ -1.93
SNHG1-220ENST00000544550 MED20Q9H944 212 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 INTS9Q9NV88 658 aaKnown RBP3.01□□□□□ -1.93
SNHG1-220ENST00000544550 ARMC1Q9NVT9 282 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 IKZF2Q9UKS7 526 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 KLHDC2Q9Y2U9 406 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 R4GMQ9 66 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 HERC1Q15751 4861 aa3.01□□□□□ -1.93
SNHG1-220ENST00000544550 DYNC1H1Q14204 4646 aaKnown RBP3.01□□□□□ -1.93
SNHG1-220ENST00000544550 UBR4Q5T4S7 5183 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 TMEM30CPA0ZSE6 113 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 M0R2N4 97 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 SLC22A1O15245 554 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 SPINT2O43291 252 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 ORC5O43913 435 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 SRSF10O75494 262 aaKnown RBP3□□□□□ -1.93
SNHG1-220ENST00000544550 RBBP9O75884 186 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 CCNB2O95067 398 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 HMGN1P05114 100 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 FABP3P05413 133 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 SCTP09683 121 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 CTRB1P17538 263 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 VHLP40337 213 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 LGALS7P47929 136 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 VSNL1P62760 191 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 MRGPRG-AS1Q2M3A8 158 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 PXDC1Q5TGL8 231 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 ZNF57Q68EA5 555 aaPredicted RBP3□□□□□ -1.93
SNHG1-220ENST00000544550 CTRB2Q6GPI1 263 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 FAM71F2Q6NXP2 309 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 UTS2BQ765I0 119 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 SLC38A6Q8IZM9 456 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 PARP16Q8N5Y8 322 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 NANOGP1Q8N7R0 232 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 LFNGQ8NES3 379 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 OR9Q2Q8NGE9 314 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 UBALD1Q8TB05 177 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 CNIH3Q8TBE1 160 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 GHSRQ92847 366 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 ARL11Q969Q4 196 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 CPNE2Q96FN4 548 aaPredicted RBP3□□□□□ -1.93
SNHG1-220ENST00000544550 CMTM3Q96MX0 182 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 OPALINQ96PE5 141 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 RNF5Q99942 180 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 RARRES2Q99969 163 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 HOPXQ9BPY8 73 aaPredicted RBP3□□□□□ -1.93
SNHG1-220ENST00000544550 BTBD10Q9BSF8 475 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 FAM103A1Q9BTL3 118 aaKnown RBP3□□□□□ -1.93
SNHG1-220ENST00000544550 TEX12Q9BXU0 123 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 C6orf62Q9GZU0 229 aaPredicted RBP3□□□□□ -1.93
SNHG1-220ENST00000544550 HRH4Q9H3N8 390 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 CMTM6Q9NX76 183 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 GNG12Q9UBI6 72 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 ENOPH1Q9UHY7 261 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 FAT2Q9NYQ8 4349 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 SORL1Q92673 2214 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 DNAH2Q9P225 4427 aa3□□□□□ -1.93
SNHG1-220ENST00000544550 IGHV4-4A0A075B6R2 117 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 TRAV10A0A0B4J240 114 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 TRAV24A0A0B4J272 114 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 TRAV25A0A0B4J276 109 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 IGKV1-12A0A0C4DH73 117 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 A0A0G2JND7 137 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 IGLV5-39A0A0G2JS06 123 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 OR5H14A6NHG9 310 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 C2orf70A6NJV1 201 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 H3BN98 237 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 C15orf65H3BRN8 121 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 LGALS9O00182 355 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 TNFRSF11BO00300 401 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 SOX14O95416 240 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 IFNA10P01566 189 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 IGKV1D-12P01611 117 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 AMBPP02760 352 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 SEMG1P04279 462 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 UBCP0CG48 685 aaKnown RBP2.99□□□□□ -1.93
SNHG1-220ENST00000544550 FOLR2P14207 255 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 NCK1P16333 377 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 ATF1P18846 271 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 EPHA2P29317 976 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 MC5RP33032 325 aa2.99□□□□□ -1.93
SNHG1-220ENST00000544550 MAGOHP61326 146 aaKnown RBP2.99□□□□□ -1.93
SNHG1-220ENST00000544550 KLF9Q13886 244 aaPredicted RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms