RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, human

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-229	ENST00000543393	RPL22L1	Q6P5R6	122 aa	Known RBP	13.75	□□□□□ -0.21
RAP1B-229	ENST00000543393	TSNAX	Q99598	290 aa	Known RBP	13.75	□□□□□ -0.21
RAP1B-229	ENST00000543393	OVOL2	Q9BRP0	275 aa		13.75	□□□□□ -0.21
RAP1B-229	ENST00000543393	TINAGL1	Q9GZM7	467 aa	Predicted RBP	13.75	□□□□□ -0.21
RAP1B-229	ENST00000543393	AMBN	Q9NP70	447 aa		13.75	□□□□□ -0.21
RAP1B-229	ENST00000543393	LRRC42	Q9Y546	428 aa		13.75	□□□□□ -0.21
RAP1B-229	ENST00000543393	SAC3D1	A6NKF1	404 aa		13.74	□□□□□ -0.21
RAP1B-229	ENST00000543393	AIRE	O43918	545 aa		13.74	□□□□□ -0.21
RAP1B-229	ENST00000543393	SPDEF	O95238	335 aa		13.74	□□□□□ -0.21
RAP1B-229	ENST00000543393	IGKV1-16	P04430	117 aa		13.74	□□□□□ -0.21
RAP1B-229	ENST00000543393	FCGR1A	P12314	374 aa		13.74	□□□□□ -0.21
RAP1B-229	ENST00000543393	CPE	P16870	476 aa		13.74	□□□□□ -0.21
RAP1B-229	ENST00000543393	RPS16	P62249	146 aa	Known RBP	13.74	□□□□□ -0.21
RAP1B-229	ENST00000543393	C6orf141	Q5SZD1	244 aa		13.74	□□□□□ -0.21
RAP1B-229	ENST00000543393	AWAT2	Q6E213	333 aa		13.74	□□□□□ -0.21
RAP1B-229	ENST00000543393	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.74	□□□□□ -0.21
RAP1B-229	ENST00000543393	JAGN1	Q8N5M9	183 aa		13.74	□□□□□ -0.21
RAP1B-229	ENST00000543393	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.74	□□□□□ -0.21
RAP1B-229	ENST00000543393	OR13C5	Q8NGS8	318 aa		13.74	□□□□□ -0.21
RAP1B-229	ENST00000543393	SNAPC3	Q92966	411 aa		13.74	□□□□□ -0.21
RAP1B-229	ENST00000543393	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	13.74	□□□□□ -0.21
RAP1B-229	ENST00000543393		Q96M66	194 aa		13.74	□□□□□ -0.21
RAP1B-229	ENST00000543393	OR14A2	Q96R54	314 aa		13.74	□□□□□ -0.21
RAP1B-229	ENST00000543393	ABRACL	Q9P1F3	81 aa		13.74	□□□□□ -0.21
RAP1B-229	ENST00000543393	HECTD4	Q9Y4D8	3996 aa		13.74	□□□□□ -0.21
RAP1B-229	ENST00000543393	TRAV8-7	A0A075B6U6	113 aa		13.73	□□□□□ -0.21
RAP1B-229	ENST00000543393		H3BNX3	289 aa		13.73	□□□□□ -0.21
RAP1B-229	ENST00000543393	PDCD6	O75340	191 aa		13.73	□□□□□ -0.21
RAP1B-229	ENST00000543393	GABRB1	P18505	474 aa		13.73	□□□□□ -0.21
RAP1B-229	ENST00000543393	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
RAP1B-229	ENST00000543393	GUCA2B	Q16661	112 aa		13.73	□□□□□ -0.21
RAP1B-229	ENST00000543393	CCDC58	Q4VC31	144 aa		13.73	□□□□□ -0.21
RAP1B-229	ENST00000543393	OR52I1	Q8NGK6	324 aa		13.73	□□□□□ -0.21
RAP1B-229	ENST00000543393	DYNLRB2	Q8TF09	96 aa		13.73	□□□□□ -0.21
RAP1B-229	ENST00000543393	GATAD1	Q8WUU5	269 aa		13.73	□□□□□ -0.21
RAP1B-229	ENST00000543393	CENPN	Q96H22	339 aa	Predicted RBP	13.73	□□□□□ -0.21
RAP1B-229	ENST00000543393	USMG5	Q96IX5	58 aa		13.73	□□□□□ -0.21
RAP1B-229	ENST00000543393	TMEM68	Q96MH6	324 aa		13.73	□□□□□ -0.21
RAP1B-229	ENST00000543393	AGMAT	Q9BSE5	352 aa		13.73	□□□□□ -0.21
RAP1B-229	ENST00000543393		A0A0B4J203	849 aa		13.72	□□□□□ -0.21
RAP1B-229	ENST00000543393		A0A0J9YWU9	116 aa		13.72	□□□□□ -0.21
RAP1B-229	ENST00000543393	RBMXL2	O75526	392 aa	Known RBP	13.72	□□□□□ -0.21
RAP1B-229	ENST00000543393	CRTAP	O75718	401 aa	Predicted RBP	13.72	□□□□□ -0.21
RAP1B-229	ENST00000543393	LGALS7	P47929	136 aa		13.72	□□□□□ -0.21
RAP1B-229	ENST00000543393	LINC00205	P59089	165 aa		13.72	□□□□□ -0.21
RAP1B-229	ENST00000543393	DEFB114	Q30KQ6	69 aa		13.72	□□□□□ -0.21
RAP1B-229	ENST00000543393	ZIK1	Q3SY52	487 aa	Predicted RBP	13.72	□□□□□ -0.21
RAP1B-229	ENST00000543393	COA4	Q9NYJ1	87 aa		13.72	□□□□□ -0.21
RAP1B-229	ENST00000543393	CKLF	Q9UBR5	152 aa		13.72	□□□□□ -0.21
RAP1B-229	ENST00000543393	PROP1	O75360	226 aa		13.71	□□□□□ -0.21
RAP1B-229	ENST00000543393	LIMS3	P0CW19	117 aa		13.71	□□□□□ -0.21
RAP1B-229	ENST00000543393	LIMS4	P0CW20	117 aa		13.71	□□□□□ -0.21
RAP1B-229	ENST00000543393	PJVK	Q0ZLH3	352 aa		13.71	□□□□□ -0.21
RAP1B-229	ENST00000543393	TRBV5-5	A0A0J9YX44	114 aa		13.7	□□□□□ -0.22
RAP1B-229	ENST00000543393	BMPR1B	O00238	502 aa		13.7	□□□□□ -0.22
RAP1B-229	ENST00000543393	ATP8B1	O43520	1251 aa		13.7	□□□□□ -0.22
RAP1B-229	ENST00000543393	ALPL	P05186	524 aa		13.7	□□□□□ -0.22
RAP1B-229	ENST00000543393	PDPN	Q86YL7	162 aa		13.7	□□□□□ -0.22
RAP1B-229	ENST00000543393	ZNF383	Q8NA42	475 aa		13.7	□□□□□ -0.22
RAP1B-229	ENST00000543393	FAM46B	Q96A09	425 aa		13.7	□□□□□ -0.22
RAP1B-229	ENST00000543393	KCTD12	Q96CX2	325 aa	Known RBP	13.7	□□□□□ -0.22
RAP1B-229	ENST00000543393	WDR89	Q96FK6	387 aa	Predicted RBP	13.7	□□□□□ -0.22
RAP1B-229	ENST00000543393	SULT4A1	Q9BR01	284 aa		13.7	□□□□□ -0.22
RAP1B-229	ENST00000543393	GGTLC1	Q9BX51	225 aa		13.7	□□□□□ -0.22
RAP1B-229	ENST00000543393	ZC4H2	Q9NQZ6	224 aa		13.7	□□□□□ -0.22
RAP1B-229	ENST00000543393	KLK5	Q9Y337	293 aa	Predicted RBP	13.7	□□□□□ -0.22
RAP1B-229	ENST00000543393	ORC6	Q9Y5N6	252 aa		13.7	□□□□□ -0.22
RAP1B-229	ENST00000543393	ITGB1BP1	O14713	200 aa		13.69	□□□□□ -0.22
RAP1B-229	ENST00000543393	APELA	P0DMC3	54 aa		13.69	□□□□□ -0.22
RAP1B-229	ENST00000543393	EDN2	P20800	178 aa		13.69	□□□□□ -0.22
RAP1B-229	ENST00000543393	KIR2DS2	P43631	304 aa		13.69	□□□□□ -0.22
RAP1B-229	ENST00000543393	OR2G6	Q5TZ20	316 aa		13.69	□□□□□ -0.22
RAP1B-229	ENST00000543393	SVOP	Q8N4V2	548 aa		13.69	□□□□□ -0.22
RAP1B-229	ENST00000543393	SMIM19	Q96E16	107 aa		13.69	□□□□□ -0.22
RAP1B-229	ENST00000543393		Q96MT0	163 aa		13.69	□□□□□ -0.22
RAP1B-229	ENST00000543393	MRPS18A	Q9NVS2	196 aa	Known RBP	13.69	□□□□□ -0.22
RAP1B-229	ENST00000543393		A0A1W2PPK0	400 aa		13.68	□□□□□ -0.22
RAP1B-229	ENST00000543393	OGG1	O15527	345 aa		13.68	□□□□□ -0.22
RAP1B-229	ENST00000543393	IGLV2-23	P01705	113 aa		13.68	□□□□□ -0.22
RAP1B-229	ENST00000543393	CAPG	P40121	348 aa		13.68	□□□□□ -0.22
RAP1B-229	ENST00000543393	TNFRSF9	Q07011	255 aa		13.68	□□□□□ -0.22
RAP1B-229	ENST00000543393		Q499Y3	187 aa		13.68	□□□□□ -0.22
RAP1B-229	ENST00000543393	SLC16A13	Q7RTY0	426 aa		13.68	□□□□□ -0.22
RAP1B-229	ENST00000543393	LYG2	Q86SG7	212 aa		13.68	□□□□□ -0.22
RAP1B-229	ENST00000543393	FAAP24	Q9BTP7	215 aa		13.68	□□□□□ -0.22
RAP1B-229	ENST00000543393	C11orf54	Q9H0W9	315 aa	Predicted RBP	13.68	□□□□□ -0.22
RAP1B-229	ENST00000543393	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.67	□□□□□ -0.22
RAP1B-229	ENST00000543393	EI24	O14681	340 aa		13.67	□□□□□ -0.22
RAP1B-229	ENST00000543393	NDUFB8	O95169	186 aa		13.67	□□□□□ -0.22
RAP1B-229	ENST00000543393	APOA2	P02652	100 aa		13.67	□□□□□ -0.22
RAP1B-229	ENST00000543393	CRYGB	P07316	175 aa		13.67	□□□□□ -0.22
RAP1B-229	ENST00000543393	FOLR2	P14207	255 aa		13.67	□□□□□ -0.22
RAP1B-229	ENST00000543393	CEACAM6	P40199	344 aa		13.67	□□□□□ -0.22
RAP1B-229	ENST00000543393	ETV1	P50549	477 aa		13.67	□□□□□ -0.22
RAP1B-229	ENST00000543393	LGALS9C	Q6DKI2	356 aa		13.67	□□□□□ -0.22
RAP1B-229	ENST00000543393	C6orf201	Q7Z4U5	140 aa		13.67	□□□□□ -0.22
RAP1B-229	ENST00000543393	WFDC3	Q8IUB2	231 aa		13.67	□□□□□ -0.22
RAP1B-229	ENST00000543393	CDH26	Q8IXH8	852 aa		13.67	□□□□□ -0.22
RAP1B-229	ENST00000543393	RHOXF1	Q8NHV9	184 aa		13.67	□□□□□ -0.22
RAP1B-229	ENST00000543393	SETD6	Q8TBK2	473 aa		13.67	□□□□□ -0.22

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