RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 PRAMEF6Q5VXH4 476 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 ZNF66Q6ZN08 573 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 BHLHA15Q7RTS1 189 aaPredicted RBP5.48□□□□□ -1.53
PTPRO-208ENST00000542557 REC114Q7Z4M0 266 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 ZNF561Q8N587 486 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 SFT2D1Q8WV19 159 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 ZDHHC16Q969W1 377 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 PINX1Q96BK5 328 aaKnown RBP5.48□□□□□ -1.53
PTPRO-208ENST00000542557 STARD4Q96DR4 205 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 TAAR6Q96RI8 345 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 WDR61Q9GZS3 305 aaKnown RBP5.48□□□□□ -1.53
PTPRO-208ENST00000542557 PRDM13Q9H4Q3 707 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 TIMM9Q9Y5J7 89 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 IGHV3-64DA0A0J9YX35 117 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 A0A0U1RQK1 487 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 ZNF320A2RRD8 509 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 WISP2O76076 250 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 CLDN14O95500 239 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 GABRA2P47869 451 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 COL10A1Q03692 680 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 AESQ08117 197 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 PMS2P11Q13670 270 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 C3orf36Q3SXR2 165 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 ZNF600Q6ZNG1 722 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 BEND4Q6ZU67 534 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 CENPVQ7Z7K6 275 aaPredicted RBP5.48□□□□□ -1.53
PTPRO-208ENST00000542557 MOGAT3Q86VF5 341 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 OR52L2PQ8NGH6 319 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 YPEL4Q96NS1 127 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 C20orf24Q9BUV8 137 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 SLC25A15Q9Y619 301 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 CELSR3Q9NYQ7 3312 aa5.48□□□□□ -1.53
PTPRO-208ENST00000542557 LRRC30A6NM36 301 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 H3BQ15 152 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 RAB29O14966 203 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 ADH4P08319 380 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 RAB5AP20339 215 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 CFHR2P36980 270 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 RPS23P62266 143 aaKnown RBP5.47□□□□□ -1.53
PTPRO-208ENST00000542557 RPL30P62888 115 aaKnown RBP5.47□□□□□ -1.53
PTPRO-208ENST00000542557 HAGHQ16775 308 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 ATP6V1FQ16864 119 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 IGFL3Q6UXB1 125 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 SLC35E3Q7Z769 313 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 ZNF610Q8N9Z0 462 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 MRGPRDQ8TDS7 321 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 HSD17B10Q99714 261 aaKnown RBP5.47□□□□□ -1.53
PTPRO-208ENST00000542557 RSG1Q9BU20 258 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 MRPL37Q9BZE1 423 aaKnown RBP5.47□□□□□ -1.53
PTPRO-208ENST00000542557 RBKSQ9H477 322 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 ESRP2Q9H6T0 727 aaKnown RBP5.47□□□□□ -1.53
PTPRO-208ENST00000542557 RPRMQ9NS64 109 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 CISD1Q9NZ45 108 aaKnown RBP5.47□□□□□ -1.53
PTPRO-208ENST00000542557 ODAMA1E959 279 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 SRRM5B3KS81 715 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 C15orf65H3BRN8 121 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 RAMP3O60896 148 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 S1PR2O95136 353 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 BCL2P10415 239 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 FABP6P51161 128 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 SLC38A11Q08AI6 406 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 DEFB109BQ30KR1 87 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 TMEM41BQ5BJD5 291 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 SPANXN5Q5MJ07 72 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 ZNF787Q6DD87 383 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 C1QL4Q86Z23 238 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 ZADH2Q8N4Q0 377 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 CYB561D1Q8N8Q1 229 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 OR13A1Q8NGR1 328 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 C2CD4CQ8TF44 421 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 LRRC29Q8WV35 223 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 TAF15Q92804 592 aaKnown RBP eCLIP5.47□□□□□ -1.53
PTPRO-208ENST00000542557 ISOC2Q96AB3 205 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 CIB3Q96Q77 187 aaPredicted RBP5.47□□□□□ -1.53
PTPRO-208ENST00000542557 OPN3Q9H1Y3 402 aaPredicted RBP5.47□□□□□ -1.53
PTPRO-208ENST00000542557 MSL2Q9HCI7 577 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.47□□□□□ -1.53
PTPRO-208ENST00000542557 PUS1Q9Y606 427 aaKnown RBP eCLIP5.47□□□□□ -1.53
PTPRO-208ENST00000542557 OTOGLQ3ZCN5 2332 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 CHD3Q12873 2000 aaKnown RBP5.47□□□□□ -1.53
PTPRO-208ENST00000542557 A0A1W2PPE2 198 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 A8MXE2 369 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 SPINT2O43291 252 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 ZNF737O75373 536 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 NDUFS6O75380 124 aaKnown RBP5.47□□□□□ -1.53
PTPRO-208ENST00000542557 LY86O95711 162 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 CLDN1O95832 211 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 SSTR5P35346 364 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 GLIPR1P48060 266 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 BRWD1-AS2P59051 145 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 ZNF726P1Q15940 193 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 CR1LQ2VPA4 569 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 SEM1Q6ZVN7 128 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 ZNF429Q86V71 674 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 ZFP82Q8N141 532 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 ZNF808Q8N4W9 903 aaPredicted RBP5.47□□□□□ -1.53
PTPRO-208ENST00000542557 CD177Q8N6Q3 437 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 TCTEX1D2Q8WW35 142 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 EDARADDQ8WWZ3 215 aa5.47□□□□□ -1.53
PTPRO-208ENST00000542557 RAB39BQ96DA2 213 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms