RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 PALMDQ9NP74 551 aa18.7■□□□□ 0.58
HOMER3-205ENST00000542541 CCL28Q9NRJ3 127 aa18.7■□□□□ 0.58
HOMER3-205ENST00000542541 SDHAF2Q9NX18 166 aa18.7■□□□□ 0.58
HOMER3-205ENST00000542541 ASAH1Q13510 395 aa18.69■□□□□ 0.58
HOMER3-205ENST00000542541 SLC38A6Q8IZM9 456 aa18.69■□□□□ 0.58
HOMER3-205ENST00000542541 ZFAND1Q8TCF1 268 aa18.69■□□□□ 0.58
HOMER3-205ENST00000542541 RTN4IP1Q8WWV3 396 aaPredicted RBP18.69■□□□□ 0.58
HOMER3-205ENST00000542541 AJUBAQ96IF1 538 aa18.69■□□□□ 0.58
HOMER3-205ENST00000542541 FXYD6Q9H0Q3 95 aa18.69■□□□□ 0.58
HOMER3-205ENST00000542541 NAV3Q8IVL0 2385 aa18.69■□□□□ 0.58
HOMER3-205ENST00000542541 PGAM2P15259 253 aa18.68■□□□□ 0.58
HOMER3-205ENST00000542541 S100GP29377 79 aa18.68■□□□□ 0.58
HOMER3-205ENST00000542541 RPL39P5Q59GN2 51 aa18.68■□□□□ 0.58
HOMER3-205ENST00000542541 CMTM1Q8IZ96 169 aa18.68■□□□□ 0.58
HOMER3-205ENST00000542541 BCL6BQ8N143 479 aaPredicted RBP18.68■□□□□ 0.58
HOMER3-205ENST00000542541 OR8H3Q8N146 312 aa18.68■□□□□ 0.58
HOMER3-205ENST00000542541 DRAM1Q8N682 238 aa18.68■□□□□ 0.58
HOMER3-205ENST00000542541 C17orf50Q8WW18 174 aa18.68■□□□□ 0.58
HOMER3-205ENST00000542541 C22orf15Q8WYQ4 148 aa18.68■□□□□ 0.58
HOMER3-205ENST00000542541 SLC25A21Q9BQT8 299 aaPredicted RBP18.68■□□□□ 0.58
HOMER3-205ENST00000542541 ZNF251Q9BRH9 671 aa18.68■□□□□ 0.58
HOMER3-205ENST00000542541 MEGF9Q9H1U4 602 aa18.68■□□□□ 0.58
HOMER3-205ENST00000542541 NSD1Q96L73 2696 aaPredicted RBP18.68■□□□□ 0.58
HOMER3-205ENST00000542541 GNRHRP30968 328 aa18.67■□□□□ 0.58
HOMER3-205ENST00000542541 DIAPH2-AS1Q14236 149 aa18.67■□□□□ 0.58
HOMER3-205ENST00000542541 TBC1D24Q9ULP9 559 aa18.67■□□□□ 0.58
HOMER3-205ENST00000542541 M0R1X1 148 aa18.67■□□□□ 0.58
HOMER3-205ENST00000542541 GPR31O00270 319 aa18.67■□□□□ 0.58
HOMER3-205ENST00000542541 REG1BP48304 166 aa18.67■□□□□ 0.58
HOMER3-205ENST00000542541 OR13C8Q8NGS7 320 aa18.67■□□□□ 0.58
HOMER3-205ENST00000542541 MARCH1Q8TCQ1 289 aa18.67■□□□□ 0.58
HOMER3-205ENST00000542541 ZNF486Q96H40 463 aaPredicted RBP18.67■□□□□ 0.58
HOMER3-205ENST00000542541 RSRP1Q9BUV0 290 aa18.67■□□□□ 0.58
HOMER3-205ENST00000542541 MTORP42345 2549 aa18.66■□□□□ 0.58
HOMER3-205ENST00000542541 PROP1O75360 226 aa18.66■□□□□ 0.58
HOMER3-205ENST00000542541 IGLV2-14P01704 120 aa18.66■□□□□ 0.58
HOMER3-205ENST00000542541 BRS3P32247 399 aa18.66■□□□□ 0.58
HOMER3-205ENST00000542541 DCTN2Q13561 401 aaKnown RBP18.66■□□□□ 0.58
HOMER3-205ENST00000542541 RBMS2Q15434 407 aaKnown RBP18.66■□□□□ 0.58
HOMER3-205ENST00000542541 DEFB112Q30KQ8 113 aa18.66■□□□□ 0.58
HOMER3-205ENST00000542541 ZNF818PQ6ZRF7 136 aa18.66■□□□□ 0.58
HOMER3-205ENST00000542541 DYNAPQ8N1N2 210 aa18.66■□□□□ 0.58
HOMER3-205ENST00000542541 BVESQ8NE79 360 aa18.66■□□□□ 0.58
HOMER3-205ENST00000542541 ZDHHC16Q969W1 377 aa18.66■□□□□ 0.58
HOMER3-205ENST00000542541 ADTRPQ96IZ2 230 aa18.66■□□□□ 0.58
HOMER3-205ENST00000542541 HSD17B10Q99714 261 aaKnown RBP18.66■□□□□ 0.58
HOMER3-205ENST00000542541 SOX21Q9Y651 276 aaPredicted RBP18.66■□□□□ 0.58
HOMER3-205ENST00000542541 IGHV1-3A0A0C4DH29 117 aa18.65■□□□□ 0.58
HOMER3-205ENST00000542541 CRLF1O75462 422 aa18.65■□□□□ 0.58
HOMER3-205ENST00000542541 BAMBIQ13145 260 aa18.65■□□□□ 0.58
HOMER3-205ENST00000542541 ABCA11PQ4W5N1 156 aa18.65■□□□□ 0.58
HOMER3-205ENST00000542541 MOB3BQ86TA1 216 aa18.65■□□□□ 0.58
HOMER3-205ENST00000542541 MRGPRFQ96AM1 343 aa18.65■□□□□ 0.58
HOMER3-205ENST00000542541 C14orf166Q9Y224 244 aaKnown RBP18.65■□□□□ 0.58
HOMER3-205ENST00000542541 CCR6P51684 374 aa18.64■□□□□ 0.57
HOMER3-205ENST00000542541 AANATQ16613 207 aa18.64■□□□□ 0.57
HOMER3-205ENST00000542541 RBMS3Q6XE24 437 aaKnown RBP18.64■□□□□ 0.57
HOMER3-205ENST00000542541 ZNF66Q6ZN08 573 aa18.64■□□□□ 0.57
HOMER3-205ENST00000542541 PRDM13Q9H4Q3 707 aa18.64■□□□□ 0.57
HOMER3-205ENST00000542541 GPR132Q9UNW8 380 aa18.64■□□□□ 0.57
HOMER3-205ENST00000542541 A0A1W2PPI3 338 aa18.63■□□□□ 0.57
HOMER3-205ENST00000542541 VGLL3A8MV65 326 aa18.63■□□□□ 0.57
HOMER3-205ENST00000542541 CTSDP07339 412 aaPredicted RBP18.63■□□□□ 0.57
HOMER3-205ENST00000542541 SLC6A1P30531 599 aa18.63■□□□□ 0.57
HOMER3-205ENST00000542541 BTCP35070 178 aa18.63■□□□□ 0.57
HOMER3-205ENST00000542541 THBS3P49746 956 aa18.63■□□□□ 0.57
HOMER3-205ENST00000542541 POC5Q8NA72 575 aa18.63■□□□□ 0.57
HOMER3-205ENST00000542541 MRPL20Q9BYC9 149 aaKnown RBP18.63■□□□□ 0.57
HOMER3-205ENST00000542541 DPAGT1Q9H3H5 408 aa18.63■□□□□ 0.57
HOMER3-205ENST00000542541 COPZ2Q9P299 210 aa18.63■□□□□ 0.57
HOMER3-205ENST00000542541 FAM240BA0A1B0GVZ2 78 aa18.63■□□□□ 0.57
HOMER3-205ENST00000542541 TIMM23O14925 209 aa18.63■□□□□ 0.57
HOMER3-205ENST00000542541 NDUFB6O95139 128 aa18.63■□□□□ 0.57
HOMER3-205ENST00000542541 FAM157CP0CG43 387 aa18.63■□□□□ 0.57
HOMER3-205ENST00000542541 CT45A6P0DMU7 189 aa18.63■□□□□ 0.57
HOMER3-205ENST00000542541 CT45A5P0DMU8 189 aa18.63■□□□□ 0.57
HOMER3-205ENST00000542541 CT45A7P0DMV0 189 aa18.63■□□□□ 0.57
HOMER3-205ENST00000542541 MC5RP33032 325 aa18.63■□□□□ 0.57
HOMER3-205ENST00000542541 DUTP33316 252 aaKnown RBP18.63■□□□□ 0.57
HOMER3-205ENST00000542541 DYNLT3P51808 116 aa18.63■□□□□ 0.57
HOMER3-205ENST00000542541 TAGLNQ01995 201 aaKnown RBP18.63■□□□□ 0.57
HOMER3-205ENST00000542541 ZDHHC22Q8N966 263 aa18.63■□□□□ 0.57
HOMER3-205ENST00000542541 DRAXINQ8NBI3 349 aaPredicted RBP18.63■□□□□ 0.57
HOMER3-205ENST00000542541 C5orf30Q96GV9 206 aa18.63■□□□□ 0.57
HOMER3-205ENST00000542541 NABP2Q9BQ15 211 aa18.63■□□□□ 0.57
HOMER3-205ENST00000542541 RNF212BA8MTL3 300 aa18.62■□□□□ 0.57
HOMER3-205ENST00000542541 PAX6P26367 422 aa18.62■□□□□ 0.57
HOMER3-205ENST00000542541 CATR1Q13166 79 aa18.62■□□□□ 0.57
HOMER3-205ENST00000542541 LRRC75BQ2VPJ9 315 aa18.62■□□□□ 0.57
HOMER3-205ENST00000542541 CCDC71LQ8N9Z2 235 aa18.62■□□□□ 0.57
HOMER3-205ENST00000542541 SLC2A9Q9NRM0 540 aa18.62■□□□□ 0.57
HOMER3-205ENST00000542541 PRELID3BQ9Y3B1 194 aa18.62■□□□□ 0.57
HOMER3-205ENST00000542541 TNFSF12O43508 249 aa18.61■□□□□ 0.57
HOMER3-205ENST00000542541 PGLYRP1O75594 196 aaPredicted RBP18.61■□□□□ 0.57
HOMER3-205ENST00000542541 HABP2Q14520 560 aaPredicted RBP18.61■□□□□ 0.57
HOMER3-205ENST00000542541 TUSC1Q2TAM9 212 aa18.61■□□□□ 0.57
HOMER3-205ENST00000542541 PHLDA2Q53GA4 152 aa18.61■□□□□ 0.57
HOMER3-205ENST00000542541 Q6YL49 198 aa18.61■□□□□ 0.57
HOMER3-205ENST00000542541 ENKURQ8TC29 256 aa18.61■□□□□ 0.57
HOMER3-205ENST00000542541 SSX3Q99909 188 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms