RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 PPIAL4FP0DN26 164 aa12.24□□□□□ -0.45
TRPM1-203ENST00000542188 VSIG10L2P0DP72 767 aa12.24□□□□□ -0.45
TRPM1-203ENST00000542188 ZNF79Q15937 498 aa12.24□□□□□ -0.45
TRPM1-203ENST00000542188 CITED2Q99967 270 aaPredicted RBP12.24□□□□□ -0.45
TRPM1-203ENST00000542188 PPIAL4AQ9Y536 164 aa12.24□□□□□ -0.45
TRPM1-203ENST00000542188 C9orf172C9J069 976 aa12.24□□□□□ -0.45
TRPM1-203ENST00000542188 FAM106AQ4KMX7 169 aa12.24□□□□□ -0.45
TRPM1-203ENST00000542188 MIC13Q5XKP0 118 aa12.24□□□□□ -0.45
TRPM1-203ENST00000542188 GRIFINA4D1Z8 144 aa12.24□□□□□ -0.45
TRPM1-203ENST00000542188 VENTXO95231 258 aa12.24□□□□□ -0.45
TRPM1-203ENST00000542188 KCNS1Q96KK3 526 aa12.24□□□□□ -0.45
TRPM1-203ENST00000542188 ZNF142P52746 1687 aaPredicted RBP12.24□□□□□ -0.45
TRPM1-203ENST00000542188 CA7P43166 264 aa12.24□□□□□ -0.45
TRPM1-203ENST00000542188 RPL8P62917 257 aaKnown RBP12.24□□□□□ -0.45
TRPM1-203ENST00000542188 FOXC1Q12948 553 aa12.24□□□□□ -0.45
TRPM1-203ENST00000542188 SAPCD1Q5SSQ6 148 aa12.24□□□□□ -0.45
TRPM1-203ENST00000542188 FSCN3Q9NQT6 498 aa12.24□□□□□ -0.45
TRPM1-203ENST00000542188 RND3P61587 244 aa12.23□□□□□ -0.45
TRPM1-203ENST00000542188 KIAA0040Q15053 153 aa12.23□□□□□ -0.45
TRPM1-203ENST00000542188 AMER3Q8N944 861 aa12.23□□□□□ -0.45
TRPM1-203ENST00000542188 RPS11P62280 158 aaKnown RBP eCLIP12.23□□□□□ -0.45
TRPM1-203ENST00000542188 C4AP0C0L4 1744 aa12.23□□□□□ -0.45
TRPM1-203ENST00000542188 C4BP0C0L5 1744 aa12.23□□□□□ -0.45
TRPM1-203ENST00000542188 ISG15P05161 165 aa12.23□□□□□ -0.45
TRPM1-203ENST00000542188 RPL31P62899 125 aaKnown RBP12.23□□□□□ -0.45
TRPM1-203ENST00000542188 TBL2Q9Y4P3 447 aaKnown RBP12.23□□□□□ -0.45
TRPM1-203ENST00000542188 REG1BP48304 166 aa12.23□□□□□ -0.45
TRPM1-203ENST00000542188 KIAA1644Q3SXP7 199 aa12.23□□□□□ -0.45
TRPM1-203ENST00000542188 KIR3DL3Q8N743 410 aa12.23□□□□□ -0.45
TRPM1-203ENST00000542188 MARVELD3Q96A59 401 aa12.23□□□□□ -0.45
TRPM1-203ENST00000542188 DUX5Q96PT3 197 aa12.23□□□□□ -0.45
TRPM1-203ENST00000542188 A0A1B0GW15 77 aa12.23□□□□□ -0.45
TRPM1-203ENST00000542188 DCAF12L2Q5VW00 463 aa12.23□□□□□ -0.45
TRPM1-203ENST00000542188 OR51G1Q8NGK1 321 aa12.23□□□□□ -0.45
TRPM1-203ENST00000542188 SCGB3A1Q96QR1 104 aa12.23□□□□□ -0.45
TRPM1-203ENST00000542188 CXCL16Q9H2A7 254 aa12.23□□□□□ -0.45
TRPM1-203ENST00000542188 MGST3O14880 152 aa12.22□□□□□ -0.45
TRPM1-203ENST00000542188 CRYBB3P26998 211 aa12.22□□□□□ -0.45
TRPM1-203ENST00000542188 FAM74A4Q5TZK3 123 aa12.22□□□□□ -0.45
TRPM1-203ENST00000542188 TP53I13Q8NBR0 393 aaPredicted RBP12.22□□□□□ -0.45
TRPM1-203ENST00000542188 CADM4Q8NFZ8 388 aa12.22□□□□□ -0.45
TRPM1-203ENST00000542188 YAE1D1Q9NRH1 226 aa12.22□□□□□ -0.45
TRPM1-203ENST00000542188 TMEM106BQ9NUM4 274 aa12.22□□□□□ -0.45
TRPM1-203ENST00000542188 AGFG2O95081 481 aa12.22□□□□□ -0.45
TRPM1-203ENST00000542188 ZNF205O95201 554 aa12.22□□□□□ -0.45
TRPM1-203ENST00000542188 GGTLC2Q14390 218 aa12.22□□□□□ -0.45
TRPM1-203ENST00000542188 FAM159AQ6UWV7 190 aa12.22□□□□□ -0.45
TRPM1-203ENST00000542188 TNFRSF18Q9Y5U5 241 aa12.22□□□□□ -0.45
TRPM1-203ENST00000542188 TIAM2Q8IVF5 1701 aa12.22□□□□□ -0.45
TRPM1-203ENST00000542188 MICAL3Q7RTP6 2002 aa12.22□□□□□ -0.45
TRPM1-203ENST00000542188 TNFSF14O43557 240 aa12.22□□□□□ -0.45
TRPM1-203ENST00000542188 PRSS23O95084 383 aa12.22□□□□□ -0.45
TRPM1-203ENST00000542188 hCG_38984A0A1B0GV85 526 aa12.21□□□□□ -0.45
TRPM1-203ENST00000542188 FSTP19883 344 aa12.21□□□□□ -0.45
TRPM1-203ENST00000542188 PAX2Q02962 417 aa12.21□□□□□ -0.45
TRPM1-203ENST00000542188 ELOVL5Q9NYP7 299 aa12.21□□□□□ -0.45
TRPM1-203ENST00000542188 A0A1W2PP11 408 aa12.21□□□□□ -0.45
TRPM1-203ENST00000542188 PTP4A3O75365 173 aa12.21□□□□□ -0.45
TRPM1-203ENST00000542188 EFNB2P52799 333 aa12.21□□□□□ -0.45
TRPM1-203ENST00000542188 FAM71F2Q6NXP2 309 aa12.21□□□□□ -0.45
TRPM1-203ENST00000542188 CFAP161Q6P656 301 aa12.21□□□□□ -0.45
TRPM1-203ENST00000542188 ST6GALNAC2Q9UJ37 374 aa12.21□□□□□ -0.45
TRPM1-203ENST00000542188 LRRC37A3O60309 1634 aa12.21□□□□□ -0.45
TRPM1-203ENST00000542188 TRAV9-1A0A075B6T8 112 aa12.21□□□□□ -0.45
TRPM1-203ENST00000542188 PF4V1P10720 104 aa12.21□□□□□ -0.45
TRPM1-203ENST00000542188 PRSS12P56730 875 aa12.21□□□□□ -0.45
TRPM1-203ENST00000542188 SELENOHQ8IZQ5 122 aaKnown RBP12.21□□□□□ -0.45
TRPM1-203ENST00000542188 DMRTA2Q96SC8 542 aa12.21□□□□□ -0.45
TRPM1-203ENST00000542188 N4BP2Q86UW6 1770 aaPredicted RBP12.21□□□□□ -0.45
TRPM1-203ENST00000542188 FAM90A10PA6NDY2 464 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 FAM90A18PA6NE21 464 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 FAM90A16PA6NEW6 464 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 FAM90A20PA6NIJ5 464 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 FAM90A8PA6NJQ4 464 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 FAM90A7PA6NKC0 464 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 FAM90A22PA8MWA6 464 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 FAM90A12PA8MX19 464 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 FAM90A5PA8MXJ8 464 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 FAM90A23PA8MXZ1 464 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 BGLAPP02818 100 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 FAM90A15PP0C7V4 464 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 FAM90A13PP0C7W8 464 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 FAM90A14PP0C7W9 464 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 FAM90A24PP0C7X0 464 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 DANCRP0C864 163 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 RND2P52198 227 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 SOX8P57073 446 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 ATP5G2Q06055 141 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 OR4X2Q8NGF9 303 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 WDYHV1Q96HA8 205 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 A0A1W2PPE3 182 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 APOMO95445 188 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 PLAUP00749 431 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 TMEM196Q5HYL7 178 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 C14orf144Q96I85 54 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 TLNRD1Q9H1K6 362 aa12.21□□□□□ -0.46
TRPM1-203ENST00000542188 PSMB11A5LHX3 300 aa12.2□□□□□ -0.46
TRPM1-203ENST00000542188 LDLRAD4O15165 306 aa12.2□□□□□ -0.46
TRPM1-203ENST00000542188 SYNGR3O43761 229 aa12.2□□□□□ -0.46
TRPM1-203ENST00000542188 FGF12P61328 243 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms