RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 RAB11AP62491 216 aa14.43□□□□□ -0.1
SPIDR-227ENST00000541342 H1FOOQ8IZA3 346 aaPredicted RBP14.43□□□□□ -0.1
SPIDR-227ENST00000541342 SSX3Q99909 188 aa14.43□□□□□ -0.1
SPIDR-227ENST00000541342 GPR61Q9BZJ8 451 aa14.43□□□□□ -0.1
SPIDR-227ENST00000541342 PRDM13Q9H4Q3 707 aa14.43□□□□□ -0.1
SPIDR-227ENST00000541342 TREM2Q9NZC2 230 aa14.43□□□□□ -0.1
SPIDR-227ENST00000541342 CISD2Q8N5K1 135 aaKnown RBP14.42□□□□□ -0.1
SPIDR-227ENST00000541342 ZNF383Q8NA42 475 aa14.42□□□□□ -0.1
SPIDR-227ENST00000541342 SLC25A15Q9Y619 301 aa14.42□□□□□ -0.1
SPIDR-227ENST00000541342 A0A1B0GU03 582 aa14.42□□□□□ -0.1
SPIDR-227ENST00000541342 IQCF6A8MYZ5 107 aa14.42□□□□□ -0.1
SPIDR-227ENST00000541342 HS3ST1O14792 307 aa14.42□□□□□ -0.1
SPIDR-227ENST00000541342 NDUFS6O75380 124 aaKnown RBP14.42□□□□□ -0.1
SPIDR-227ENST00000541342 CTXN2P0C2S0 81 aa14.42□□□□□ -0.1
SPIDR-227ENST00000541342 BCL2P10415 239 aa14.42□□□□□ -0.1
SPIDR-227ENST00000541342 ZNF880Q6PDB4 577 aa14.42□□□□□ -0.1
SPIDR-227ENST00000541342 CA5BP1Q8WTZ4 195 aa14.42□□□□□ -0.1
SPIDR-227ENST00000541342 FRZBQ92765 325 aa14.42□□□□□ -0.1
SPIDR-227ENST00000541342 OR1A1Q9P1Q5 309 aa14.42□□□□□ -0.1
SPIDR-227ENST00000541342 OR14J1Q9UGF5 321 aa14.42□□□□□ -0.1
SPIDR-227ENST00000541342 PTPRQQ9UMZ3 2332 aa14.42□□□□□ -0.1
SPIDR-227ENST00000541342 ZFP92A6NM28 416 aa14.41□□□□□ -0.1
SPIDR-227ENST00000541342 DFFBO76075 338 aa14.41□□□□□ -0.1
SPIDR-227ENST00000541342 FGF8P55075 233 aaPredicted RBP14.41□□□□□ -0.1
SPIDR-227ENST00000541342 PDZD11Q5EBL8 140 aa14.41□□□□□ -0.1
SPIDR-227ENST00000541342 OR10D4PQ8NGN7 298 aa14.41□□□□□ -0.1
SPIDR-227ENST00000541342 RDH5Q92781 318 aa14.41□□□□□ -0.1
SPIDR-227ENST00000541342 CISD1Q9NZ45 108 aaKnown RBP14.41□□□□□ -0.1
SPIDR-227ENST00000541342 ERRFI1Q9UJM3 462 aaPredicted RBP14.41□□□□□ -0.1
SPIDR-227ENST00000541342 TRBV6-6A0A0A6YYG2 114 aa14.41□□□□□ -0.1
SPIDR-227ENST00000541342 SLC25A6P12236 298 aa14.41□□□□□ -0.1
SPIDR-227ENST00000541342 CEACAM8P31997 349 aaPredicted RBP14.41□□□□□ -0.1
SPIDR-227ENST00000541342 GTF3AQ92664 365 aaKnown RBP14.41□□□□□ -0.1
SPIDR-227ENST00000541342 PKIBQ9C010 78 aa14.41□□□□□ -0.1
SPIDR-227ENST00000541342 ZZEF1O43149 2961 aa14.41□□□□□ -0.1
SPIDR-227ENST00000541342 SEC14L6B5MCN3 397 aa14.41□□□□□ -0.1
SPIDR-227ENST00000541342 IGKV1-5P01602 117 aa14.41□□□□□ -0.1
SPIDR-227ENST00000541342 TRGC1P0CF51 173 aa14.41□□□□□ -0.1
SPIDR-227ENST00000541342 RND2P52198 227 aa14.41□□□□□ -0.1
SPIDR-227ENST00000541342 ZNF525Q8N782 197 aa14.41□□□□□ -0.1
SPIDR-227ENST00000541342 OBP2BQ9NPH6 170 aa14.41□□□□□ -0.1
SPIDR-227ENST00000541342 CACNG5Q9UF02 275 aa14.41□□□□□ -0.1
SPIDR-227ENST00000541342 MAP1BP46821 2468 aaKnown RBP14.4□□□□□ -0.1
SPIDR-227ENST00000541342 IGHV2OR16-5A0A0B4J2B6 119 aa14.4□□□□□ -0.1
SPIDR-227ENST00000541342 S100A2P29034 98 aa14.4□□□□□ -0.1
SPIDR-227ENST00000541342 LCN15Q6UWW0 184 aa14.4□□□□□ -0.1
SPIDR-227ENST00000541342 RCC1LQ96I51 464 aaKnown RBP14.4□□□□□ -0.1
SPIDR-227ENST00000541342 RAB40CQ96S21 281 aa14.4□□□□□ -0.1
SPIDR-227ENST00000541342 CABLES2Q9BTV7 478 aa14.4□□□□□ -0.1
SPIDR-227ENST00000541342 RTL8AQ9BWD3 113 aa14.4□□□□□ -0.1
SPIDR-227ENST00000541342 HEATR1Q9H583 2144 aaKnown RBP14.4□□□□□ -0.1
SPIDR-227ENST00000541342 RP1L1Q8IWN7 2480 aaPredicted RBP14.4□□□□□ -0.1
SPIDR-227ENST00000541342 TRAV39A0A0B4J263 110 aa14.4□□□□□ -0.1
SPIDR-227ENST00000541342 IGHV3-64DA0A0J9YX35 117 aa14.4□□□□□ -0.1
SPIDR-227ENST00000541342 METTL15P1P0C7V9 234 aa14.4□□□□□ -0.1
SPIDR-227ENST00000541342 IAPPP10997 89 aa14.4□□□□□ -0.1
SPIDR-227ENST00000541342 OR13D1Q8NGV5 346 aa14.4□□□□□ -0.1
SPIDR-227ENST00000541342 OR10J5Q8NHC4 309 aa14.4□□□□□ -0.1
SPIDR-227ENST00000541342 S100PBPQ96BU1 408 aa14.4□□□□□ -0.1
SPIDR-227ENST00000541342 FZR1Q9UM11 496 aa14.4□□□□□ -0.1
SPIDR-227ENST00000541342 ZGRF1Q86YA3 2104 aa14.4□□□□□ -0.1
SPIDR-227ENST00000541342 SPTBN4Q9H254 2564 aa14.4□□□□□ -0.1
SPIDR-227ENST00000541342 B4DEV8 164 aa14.4□□□□□ -0.11
SPIDR-227ENST00000541342 GATCO43716 136 aaKnown RBP14.4□□□□□ -0.11
SPIDR-227ENST00000541342 TESK1Q15569 626 aa14.4□□□□□ -0.11
SPIDR-227ENST00000541342 ZNF787Q6DD87 383 aa14.4□□□□□ -0.11
SPIDR-227ENST00000541342 SCCPDHQ8NBX0 429 aa14.4□□□□□ -0.11
SPIDR-227ENST00000541342 MBD3L1Q8WWY6 194 aa14.4□□□□□ -0.11
SPIDR-227ENST00000541342 FAM210BQ96KR6 192 aa14.4□□□□□ -0.11
SPIDR-227ENST00000541342 J3QT63 122 aa14.39□□□□□ -0.11
SPIDR-227ENST00000541342 IFNA5P01569 189 aa14.39□□□□□ -0.11
SPIDR-227ENST00000541342 SERPINE2P07093 398 aa14.39□□□□□ -0.11
SPIDR-227ENST00000541342 SELEP16581 610 aa14.39□□□□□ -0.11
SPIDR-227ENST00000541342 DOLPP1Q86YN1 238 aa14.39□□□□□ -0.11
SPIDR-227ENST00000541342 TMEM242Q9NWH2 141 aa14.39□□□□□ -0.11
SPIDR-227ENST00000541342 PRR30Q53SZ7 412 aaPredicted RBP14.39□□□□□ -0.11
SPIDR-227ENST00000541342 SFXN3Q9BWM7 321 aa14.39□□□□□ -0.11
SPIDR-227ENST00000541342 LRP5LA4QPB2 252 aa14.38□□□□□ -0.11
SPIDR-227ENST00000541342 MLNRO43193 412 aa14.38□□□□□ -0.11
SPIDR-227ENST00000541342 WNT2P09544 360 aa14.38□□□□□ -0.11
SPIDR-227ENST00000541342 ZNF585BQ52M93 769 aa14.38□□□□□ -0.11
SPIDR-227ENST00000541342 FAM58AQ8N1B3 248 aa14.38□□□□□ -0.11
SPIDR-227ENST00000541342 IL1F10Q8WWZ1 152 aa14.38□□□□□ -0.11
SPIDR-227ENST00000541342 SDF2L1Q9HCN8 221 aa14.38□□□□□ -0.11
SPIDR-227ENST00000541342 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.38□□□□□ -0.11
SPIDR-227ENST00000541342 SYNGR2O43760 224 aa14.38□□□□□ -0.11
SPIDR-227ENST00000541342 CYB5R3P00387 301 aaPredicted RBP14.38□□□□□ -0.11
SPIDR-227ENST00000541342 FAM87AP0C7U9 286 aa14.38□□□□□ -0.11
SPIDR-227ENST00000541342 SLC25A24Q6NUK1 477 aa14.38□□□□□ -0.11
SPIDR-227ENST00000541342 PFDN5Q99471 154 aa14.38□□□□□ -0.11
SPIDR-227ENST00000541342 RIMS4Q9H426 269 aaPredicted RBP14.38□□□□□ -0.11
SPIDR-227ENST00000541342 PPP1R2P9O14990 202 aa14.38□□□□□ -0.11
SPIDR-227ENST00000541342 FAM169BQ8N8A8 192 aa14.38□□□□□ -0.11
SPIDR-227ENST00000541342 SMG1Q96Q15 3661 aaKnown RBP14.37□□□□□ -0.11
SPIDR-227ENST00000541342 IGF2RP11717 2491 aa14.37□□□□□ -0.11
SPIDR-227ENST00000541342 HIST1H1BP16401 226 aaKnown RBP14.37□□□□□ -0.11
SPIDR-227ENST00000541342 GPX4P36969 197 aaPredicted RBP14.37□□□□□ -0.11
SPIDR-227ENST00000541342 NKX6-1P78426 367 aaPredicted RBP14.37□□□□□ -0.11
SPIDR-227ENST00000541342 C4orf17Q53FE4 359 aa14.37□□□□□ -0.11
SPIDR-227ENST00000541342 ALKBH2Q6NS38 261 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms