RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 ATP5G3P48201 142 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 CYB561P49447 251 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 TGFBR3Q03167 851 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 FFAR4Q5NUL3 377 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 TCEAL6Q6IPX3 200 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 Q6ZS49 121 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 POM121L2Q96KW2 1035 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 DCTN5Q9BTE1 182 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 PCED1AQ9H1Q7 454 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 OR2D2Q9H210 308 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 ZNF391Q9UJN7 358 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 FZR1Q9UM11 496 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 HCFC1P51610 2035 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 PPP5D1E7EU14 171 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 PSPNO60542 156 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 MPLP40238 635 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 NUBP1P53384 320 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 FAM78BQ5VT40 261 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 Q6P435 159 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 OR10G4Q8NGN3 311 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 OR10G9Q8NGN4 311 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 OR10G7Q8NGN6 311 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 KCNE4Q8WWG9 221 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 RAB24Q969Q5 203 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 APOBEC3DQ96AK3 386 aaPredicted RBP8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 NAT8Q9UHE5 227 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 GRIFINA4D1Z8 144 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 ANKRD30BLA7E2S9 258 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 C17orf98A8MV24 154 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 A8MWP6 167 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 B4DEV8 164 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 GYPAP02724 150 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 FRMD6-AS1P0C7T7 363 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 C1QTNF9P0C862 333 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 HBG1P69891 147 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 HBG2P69892 147 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 PNRC1Q12796 327 aaPredicted RBP8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 IL11RAQ14626 422 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 JOSD1Q15040 202 aaPredicted RBP8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 RNPS1Q15287 305 aaKnown RBP8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 TEX38Q6PEX7 206 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 MCEMP1Q8IX19 187 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 MRPL41Q8IXM3 137 aaKnown RBP8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 ABHD14BQ96IU4 210 aa8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 TNRC6AQ8NDV7 1962 aaKnown RBP8.72□□□□□ -1.01
CDC42SE1-207ENST00000540998 HEATR1Q9H583 2144 aaKnown RBP8.71□□□□□ -1.01
CDC42SE1-207ENST00000540998 ODAMA1E959 279 aa8.71□□□□□ -1.01
CDC42SE1-207ENST00000540998 KBTBD11O94819 623 aa8.71□□□□□ -1.01
CDC42SE1-207ENST00000540998 OR3A1P47881 315 aa8.71□□□□□ -1.01
CDC42SE1-207ENST00000540998 LHX2P50458 406 aa8.71□□□□□ -1.01
CDC42SE1-207ENST00000540998 BRWD1-AS2P59051 145 aa8.71□□□□□ -1.01
CDC42SE1-207ENST00000540998 TNFRSF9Q07011 255 aa8.71□□□□□ -1.01
CDC42SE1-207ENST00000540998 AESQ08117 197 aa8.71□□□□□ -1.01
CDC42SE1-207ENST00000540998 SRD5A3Q9H8P0 318 aa8.71□□□□□ -1.01
CDC42SE1-207ENST00000540998 PATZ1Q9HBE1 687 aaKnown RBP8.71□□□□□ -1.01
CDC42SE1-207ENST00000540998 CSMD1Q96PZ7 3565 aa8.71□□□□□ -1.01
CDC42SE1-207ENST00000540998 DUXBA0A1W2PPF3 345 aa8.71□□□□□ -1.02
CDC42SE1-207ENST00000540998 IFNA10P01566 189 aa8.71□□□□□ -1.02
CDC42SE1-207ENST00000540998 S100GP29377 79 aa8.71□□□□□ -1.02
CDC42SE1-207ENST00000540998 THBS3P49746 956 aa8.71□□□□□ -1.02
CDC42SE1-207ENST00000540998 ASPHD1Q5U4P2 390 aa8.71□□□□□ -1.02
CDC42SE1-207ENST00000540998 CST9LP1Q5W188 147 aa8.71□□□□□ -1.02
CDC42SE1-207ENST00000540998 CYP2G1PQ6ZSU1 146 aa8.71□□□□□ -1.02
CDC42SE1-207ENST00000540998 VKORC1L1Q8N0U8 176 aa8.71□□□□□ -1.02
CDC42SE1-207ENST00000540998 OR2J1Q9GZK6 312 aa8.71□□□□□ -1.02
CDC42SE1-207ENST00000540998 CTXN2P0C2S0 81 aa8.71□□□□□ -1.02
CDC42SE1-207ENST00000540998 EDDM3BP56851 147 aa8.71□□□□□ -1.02
CDC42SE1-207ENST00000540998 CLDN18P56856 261 aa8.71□□□□□ -1.02
CDC42SE1-207ENST00000540998 DPPA3Q6W0C5 159 aa8.71□□□□□ -1.02
CDC42SE1-207ENST00000540998 Q6ZR03 302 aa8.71□□□□□ -1.02
CDC42SE1-207ENST00000540998 MDP1Q86V88 176 aa8.71□□□□□ -1.02
CDC42SE1-207ENST00000540998 SCCPDHQ8NBX0 429 aa8.71□□□□□ -1.02
CDC42SE1-207ENST00000540998 OR5A2Q8NGI9 324 aa8.71□□□□□ -1.02
CDC42SE1-207ENST00000540998 CT55Q8WUE5 264 aa8.71□□□□□ -1.02
CDC42SE1-207ENST00000540998 IL22RA2Q969J5 263 aa8.71□□□□□ -1.02
CDC42SE1-207ENST00000540998 DDA1Q9BW61 102 aa8.71□□□□□ -1.02
CDC42SE1-207ENST00000540998 NXPH2O95156 264 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 GNG3P63215 75 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 TDRG1Q3Y452 100 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 SNIP1Q8TAD8 396 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 OR5B12Q96R08 314 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 IMMP2LQ96T52 175 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 OR51I2Q9H344 312 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 METRNQ9UJH8 293 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 EP300Q09472 2414 aaPredicted RBP8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 CNOT1A5YKK6 2376 aaKnown RBP8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 FAM90A10PA6NDY2 464 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 FAM90A18PA6NE21 464 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 FAM90A16PA6NEW6 464 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 FAM90A20PA6NIJ5 464 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 FAM90A8PA6NJQ4 464 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 FAM90A7PA6NKC0 464 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 FAM90A22PA8MWA6 464 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 FAM90A12PA8MX19 464 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 FAM90A5PA8MXJ8 464 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 FAM90A23PA8MXZ1 464 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 NEURL1O76050 574 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 FAM90A15PP0C7V4 464 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 FAM90A13PP0C7W8 464 aa8.7□□□□□ -1.02
CDC42SE1-207ENST00000540998 FAM90A14PP0C7W9 464 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms