RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 FXYD6Q9H0Q3 95 aa5.44□□□□□ -1.54
CLTCL1-206ENST00000540896 ALX4Q9H161 411 aaPredicted RBP5.44□□□□□ -1.54
CLTCL1-206ENST00000540896 OR2D2Q9H210 308 aa5.44□□□□□ -1.54
CLTCL1-206ENST00000540896 TMEM133Q9H2Q1 129 aa5.44□□□□□ -1.54
CLTCL1-206ENST00000540896 C5orf66Q9H5L9 145 aa5.44□□□□□ -1.54
CLTCL1-206ENST00000540896 HEXA-AS1Q9H8Q6 139 aa5.44□□□□□ -1.54
CLTCL1-206ENST00000540896 LINC00574Q9H8X3 128 aa5.44□□□□□ -1.54
CLTCL1-206ENST00000540896 KCNIP3Q9Y2W7 256 aa5.44□□□□□ -1.54
CLTCL1-206ENST00000540896 ALG5Q9Y673 324 aa5.44□□□□□ -1.54
CLTCL1-206ENST00000540896 C2CD3Q4AC94 2353 aa5.44□□□□□ -1.54
CLTCL1-206ENST00000540896 SETD2Q9BYW2 2564 aaPredicted RBP5.44□□□□□ -1.54
CLTCL1-206ENST00000540896 TANC2Q9HCD6 1990 aa5.44□□□□□ -1.54
CLTCL1-206ENST00000540896 F8P00451 2351 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 A0A0A6YYJ9 748 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 IGHV2-70DA0A0C4DH43 119 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 RNF212BA8MTL3 300 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 B4DSR2 109 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 FAM157AC9JC47 383 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 MPPED1O15442 326 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 TNFSF12O43508 249 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 TOX4O94842 621 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 IFNA2P01563 188 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 HLA-AP01891 365 aaKnown RBP5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 RBP4P02753 201 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 VSIG10L2P0DP72 767 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 ANXA3P12429 323 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 COX7A1P24310 79 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 ZNF134P52741 427 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 UBE2MP61081 183 aaKnown RBP5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 DHRS2Q13268 280 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 CT45A1Q5HYN5 189 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 FAHD2BQ6P2I3 314 aaPredicted RBP5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 GLDNQ6ZMI3 551 aaPredicted RBP5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 ZNF818PQ6ZRF7 136 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 C1orf122Q6ZSJ8 110 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 REC114Q7Z4M0 266 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 LYG2Q86SG7 212 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 TBC1D26Q86UD7 250 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 DRAM1Q8N682 238 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 ZNF645Q8N7E2 425 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 ZBTB34Q8NCN2 500 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 OR52B4Q8NGK2 314 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 OR9G1Q8NH87 305 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 CT45A3Q8NHU0 189 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 ZNF431Q8TF32 576 aaPredicted RBP5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 CASTOR1Q8WTX7 329 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 RTN4IP1Q8WWV3 396 aaPredicted RBP5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 FAHD2AQ96GK7 314 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 S1PR3Q99500 378 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 PHB2Q99623 299 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 SEC22CQ9BRL7 303 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 PCGF1Q9BSM1 259 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 ABHD14AQ9BUJ0 271 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 CLEC7AQ9BXN2 247 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 REG4Q9BYZ8 158 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 MED28Q9H204 178 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 OR51J1Q9H342 316 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 GHITMQ9H3K2 345 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 METTL8Q9H825 291 aaKnown RBP5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 MMP26Q9NRE1 261 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 SLC2A9Q9NRM0 540 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 KPTNQ9Y664 436 aa5.43□□□□□ -1.54
CLTCL1-206ENST00000540896 FLNAP21333 2647 aaKnown RBP5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 C3orf85A0A1B0GTC6 90 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 C9orf170A2RU37 121 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 CRYM-AS1A6NIL9 109 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 SNRPGP15A8MWD9 76 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 A8MXK9 166 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 J3QR06 171 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 M0R1X1 148 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 ITGB1BP1O14713 200 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 RAB29O14966 203 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 SLC31A2O15432 143 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 PFDN1O60925 122 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 PGLYRP1O75594 196 aaPredicted RBP5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 MSMBP08118 114 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 PRTN3P24158 256 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 IL3RAP26951 378 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 CD34P28906 385 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 BCAP31P51572 246 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 MECP2P51608 486 aaKnown RBP5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 LGALS4P56470 323 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 PRB3Q04118 309 aaPredicted RBP5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 LOXL1Q08397 574 aaPredicted RBP5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 CATR1Q13166 79 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 PPP1R1AQ13522 171 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 SLC9A3R2Q15599 337 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 MSMO1Q15800 293 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 SP6Q3SY56 376 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 Q3ZCU0 254 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 LY6G6FQ5SQ64 297 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 UTF1Q5T230 341 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 SPNS3Q6ZMD2 512 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 SLC25A48Q6ZT89 311 aaKnown RBP5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 KCTD9Q7L273 389 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 VMO1Q7Z5L0 202 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 LURAP1LQ8IV03 231 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 PDZD9Q8IXQ8 264 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 PNKDQ8N490 385 aa5.42□□□□□ -1.54
CLTCL1-206ENST00000540896 C12orf45Q8N5I9 185 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms