RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 IGHV1-45A0A0A0MS14 117 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 TMED7-TICAM2A0A0A6YYA0 188 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 IGHV1-69-2A0A0G2JMI3 117 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 IGHV5-10-1A0A0J9YXX1 117 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 ZFP92A6NM28 416 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 E7EQ34 232 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 H7C1C5 153 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 PI15O43692 258 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 POP7O75817 140 aaKnown RBP3.79□□□□□ -1.8
PRKDC-209ENST00000540819 ZNF432O94892 652 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 INSP01308 110 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 MAS1P04201 325 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 ADRB3P13945 408 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 CDK2P24941 298 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 GABRA3P34903 492 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 RBMXP38159 391 aaKnown RBP3.79□□□□□ -1.8
PRKDC-209ENST00000540819 CRISP3P54108 245 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 TPI1P60174 286 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 LCN6P62502 163 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 GNG5P63218 68 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 CAV1Q03135 178 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 PLPPR5Q32ZL2 321 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 RNF212Q495C1 297 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 KLHL12Q53G59 568 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 CYB5R2Q6BCY4 276 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 EBLN2Q6P2I7 272 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 MARCH3Q86UD3 253 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 ZNF329Q86UD4 541 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 CEND1Q8N111 149 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 ORMDL3Q8N138 153 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 FAM24BQ8N5W8 94 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 RNASE11Q8TAA1 199 aaKnown RBP3.79□□□□□ -1.8
PRKDC-209ENST00000540819 FRZBQ92765 325 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 EXOSC8Q96B26 276 aaKnown RBP3.79□□□□□ -1.8
PRKDC-209ENST00000540819 GPR146Q96CH1 333 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 C16orf74Q96GX8 76 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 ABHD14BQ96IU4 210 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 TSPAN32Q96QS1 320 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 PBDC1Q9BVG4 233 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 RPP21Q9H633 154 aaKnown RBP3.79□□□□□ -1.8
PRKDC-209ENST00000540819 SND1-IT1Q9HBX3 110 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 NUBP2Q9Y5Y2 271 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 KIF1BO60333 1816 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 WDR7Q9Y4E6 1490 aa3.79□□□□□ -1.8
PRKDC-209ENST00000540819 MIA2Q96PC5 1412 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 TONSLQ96HA7 1378 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 LOXHD1Q8IVV2 1947 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 SMARCA2P51531 1590 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 IGHV7-4-1A0A0J9YVY3 117 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 C4orf51C9J302 202 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.78□□□□□ -1.8
PRKDC-209ENST00000540819 AIPO00170 330 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 SRSF10O75494 262 aaKnown RBP3.78□□□□□ -1.8
PRKDC-209ENST00000540819 NDUFC2O95298 119 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 FSTL3O95633 263 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 LTAP01374 205 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 IGLV3-27P01718 113 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 LGALS1P09382 135 aaKnown RBP3.78□□□□□ -1.8
PRKDC-209ENST00000540819 ZNF688P0C7X2 276 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 IGHV1-8P0DP01 117 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 CNTFRP26992 372 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 GLRXP35754 106 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 NCALDP61601 193 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 ATP5G2Q06055 141 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 TMEM241Q24JQ0 296 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 C12orf74Q32Q52 190 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 IBA57Q5T440 356 aaKnown RBP3.78□□□□□ -1.8
PRKDC-209ENST00000540819 MORN3Q6PF18 240 aaPredicted RBP3.78□□□□□ -1.8
PRKDC-209ENST00000540819 IL34Q6ZMJ4 242 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 REEP6Q96HR9 211 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 THTPAQ9BU02 230 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 RSPO3Q9BXY4 272 aaPredicted RBP3.78□□□□□ -1.8
PRKDC-209ENST00000540819 C8orf17Q9NRJ1 99 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 SPANXCQ9NY87 97 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 RASL12Q9NYN1 266 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 JPT1Q9UK76 154 aa3.78□□□□□ -1.8
PRKDC-209ENST00000540819 HECW2Q9P2P5 1572 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 DOCK6Q96HP0 2047 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 M0R381 172 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 RGS5O15539 181 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 CRYZL1O95825 349 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 IGHV4-34P06331 123 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 C8GP07360 202 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 GIG44P09565 113 aaPredicted RBP3.77□□□□□ -1.81
PRKDC-209ENST00000540819 SEC11BP0C7V7 166 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 LINC00313P59037 77 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 RPS20P60866 119 aaKnown RBP3.77□□□□□ -1.81
PRKDC-209ENST00000540819 NDUFA5Q16718 116 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 HIGD2BQ4VC39 106 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 ZC2HC1BQ5TFG8 222 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 HES3Q5TGS1 186 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 LRP11Q86VZ4 500 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 CLVS1Q8IUQ0 354 aaPredicted RBP3.77□□□□□ -1.81
PRKDC-209ENST00000540819 OR5J2Q8NH18 312 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 RHOXF1Q8NHV9 184 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 CD200R1Q8TD46 325 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 ZNF414Q96IQ9 312 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 DERL3Q96Q80 235 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 OR2A5Q96R48 311 aa3.77□□□□□ -1.81
PRKDC-209ENST00000540819 EFCAB11Q9BUY7 163 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms