RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 RNF150Q9ULK6 438 aa10.9□□□□□ -0.66
SNHG1-213ENST00000540725 ANKRD65E5RJM6 399 aa10.9□□□□□ -0.67
SNHG1-213ENST00000540725 SOCS1O15524 211 aa10.9□□□□□ -0.67
SNHG1-213ENST00000540725 HSPA12AO43301 675 aa10.9□□□□□ -0.67
SNHG1-213ENST00000540725 IGHV3-11P01762 117 aa10.9□□□□□ -0.67
SNHG1-213ENST00000540725 UCHL1P09936 223 aa10.9□□□□□ -0.67
SNHG1-213ENST00000540725 CD37P11049 281 aa10.9□□□□□ -0.67
SNHG1-213ENST00000540725 CEACAM6P40199 344 aa10.9□□□□□ -0.67
SNHG1-213ENST00000540725 HLA-DRB3P79483 266 aa10.9□□□□□ -0.67
SNHG1-213ENST00000540725 ACTBL2Q562R1 376 aa10.9□□□□□ -0.67
SNHG1-213ENST00000540725 OGFRL1Q5TC84 451 aaPredicted RBP10.9□□□□□ -0.67
SNHG1-213ENST00000540725 RNLSQ5VYX0 342 aa10.9□□□□□ -0.67
SNHG1-213ENST00000540725 OVCH2Q7RTZ1 564 aa10.9□□□□□ -0.67
SNHG1-213ENST00000540725 OR6Q1Q8NGQ2 317 aa10.9□□□□□ -0.67
SNHG1-213ENST00000540725 EDARADDQ8WWZ3 215 aa10.9□□□□□ -0.67
SNHG1-213ENST00000540725 RCHY1Q96PM5 261 aa10.9□□□□□ -0.67
SNHG1-213ENST00000540725 CLCC1Q96S66 551 aa10.9□□□□□ -0.67
SNHG1-213ENST00000540725 RNF5Q99942 180 aa10.9□□□□□ -0.67
SNHG1-213ENST00000540725 C11orf54Q9H0W9 315 aaPredicted RBP10.9□□□□□ -0.67
SNHG1-213ENST00000540725 LPAR5Q9H1C0 372 aa10.9□□□□□ -0.67
SNHG1-213ENST00000540725 METTL1Q9UBP6 276 aaKnown RBP10.9□□□□□ -0.67
SNHG1-213ENST00000540725 AK3Q9UIJ7 227 aa10.9□□□□□ -0.67
SNHG1-213ENST00000540725 LSM2Q9Y333 95 aaKnown RBP10.9□□□□□ -0.67
SNHG1-213ENST00000540725 CASQ2O14958 399 aaPredicted RBP10.89□□□□□ -0.67
SNHG1-213ENST00000540725 OR8U9P0C7N5 309 aa10.89□□□□□ -0.67
SNHG1-213ENST00000540725 FRMD6-AS1P0C7T7 363 aa10.89□□□□□ -0.67
SNHG1-213ENST00000540725 GP9P14770 177 aa10.89□□□□□ -0.67
SNHG1-213ENST00000540725 ZBTB25P24278 435 aa10.89□□□□□ -0.67
SNHG1-213ENST00000540725 TPPP2P59282 170 aa10.89□□□□□ -0.67
SNHG1-213ENST00000540725 PITPNAQ00169 270 aa10.89□□□□□ -0.67
SNHG1-213ENST00000540725 PSG5Q15238 335 aa10.89□□□□□ -0.67
SNHG1-213ENST00000540725 P2RY14Q15391 338 aa10.89□□□□□ -0.67
SNHG1-213ENST00000540725 SPHARQ15513 63 aa10.89□□□□□ -0.67
SNHG1-213ENST00000540725 AKIRIN2Q53H80 203 aa10.89□□□□□ -0.67
SNHG1-213ENST00000540725 ZNF562Q6V9R5 426 aa10.89□□□□□ -0.67
SNHG1-213ENST00000540725 DRAXINQ8NBI3 349 aaPredicted RBP10.89□□□□□ -0.67
SNHG1-213ENST00000540725 LFNGQ8NES3 379 aa10.89□□□□□ -0.67
SNHG1-213ENST00000540725 MUC7Q8TAX7 377 aa10.89□□□□□ -0.67
SNHG1-213ENST00000540725 FLYWCH2Q96CP2 140 aaKnown RBP10.89□□□□□ -0.67
SNHG1-213ENST00000540725 MS4A10Q96PG2 267 aa10.89□□□□□ -0.67
SNHG1-213ENST00000540725 URM1Q9BTM9 101 aaKnown RBP10.89□□□□□ -0.67
SNHG1-213ENST00000540725 MGAT4AQ9UM21 535 aa10.89□□□□□ -0.67
SNHG1-213ENST00000540725 PTGES3LE9PB15 166 aa10.88□□□□□ -0.67
SNHG1-213ENST00000540725 PROP1O75360 226 aa10.88□□□□□ -0.67
SNHG1-213ENST00000540725 SPDEFO95238 335 aa10.88□□□□□ -0.67
SNHG1-213ENST00000540725 CA2P00918 260 aa10.88□□□□□ -0.67
SNHG1-213ENST00000540725 HSPB1P04792 205 aaKnown RBP10.88□□□□□ -0.67
SNHG1-213ENST00000540725 SNRPBP14678 240 aaKnown RBP10.88□□□□□ -0.67
SNHG1-213ENST00000540725 CPEP16870 476 aa10.88□□□□□ -0.67
SNHG1-213ENST00000540725 CD40LGP29965 261 aa10.88□□□□□ -0.67
SNHG1-213ENST00000540725 MED22Q15528 200 aa10.88□□□□□ -0.67
SNHG1-213ENST00000540725 FAM89BQ8N5H3 189 aa10.88□□□□□ -0.67
SNHG1-213ENST00000540725 RHOVQ96L33 236 aa10.88□□□□□ -0.67
SNHG1-213ENST00000540725 OR4C12Q96R67 309 aa10.88□□□□□ -0.67
SNHG1-213ENST00000540725 TSNAXQ99598 290 aaKnown RBP10.88□□□□□ -0.67
SNHG1-213ENST00000540725 PLGRKTQ9HBL7 147 aa10.88□□□□□ -0.67
SNHG1-213ENST00000540725 Q9N2K0 584 aa10.88□□□□□ -0.67
SNHG1-213ENST00000540725 C12orf4Q9NQ89 552 aa10.88□□□□□ -0.67
SNHG1-213ENST00000540725 TRIM64CA6NLI5 447 aa10.87□□□□□ -0.67
SNHG1-213ENST00000540725 FOXI3A8MTJ6 420 aaPredicted RBP10.87□□□□□ -0.67
SNHG1-213ENST00000540725 SLC17A2O00624 439 aa10.87□□□□□ -0.67
SNHG1-213ENST00000540725 TRGV3P03979 118 aa10.87□□□□□ -0.67
SNHG1-213ENST00000540725 IGKV1-16P04430 117 aa10.87□□□□□ -0.67
SNHG1-213ENST00000540725 TFAP2AP05549 437 aa10.87□□□□□ -0.67
SNHG1-213ENST00000540725 SCTP09683 121 aa10.87□□□□□ -0.67
SNHG1-213ENST00000540725 ARSBP15848 533 aa10.87□□□□□ -0.67
SNHG1-213ENST00000540725 RPS16P62249 146 aaKnown RBP10.87□□□□□ -0.67
SNHG1-213ENST00000540725 LIPKQ5VXJ0 399 aa10.87□□□□□ -0.67
SNHG1-213ENST00000540725 ZNF383Q8NA42 475 aa10.87□□□□□ -0.67
SNHG1-213ENST00000540725 UFD1Q92890 307 aa10.87□□□□□ -0.67
SNHG1-213ENST00000540725 TMEM203Q969S6 136 aa10.87□□□□□ -0.67
SNHG1-213ENST00000540725 PTX4Q96A99 478 aa10.87□□□□□ -0.67
SNHG1-213ENST00000540725 GFI1Q99684 422 aa10.87□□□□□ -0.67
SNHG1-213ENST00000540725 VCXQ9H320 206 aa10.87□□□□□ -0.67
SNHG1-213ENST00000540725 SLA2Q9H6Q3 261 aa10.87□□□□□ -0.67
SNHG1-213ENST00000540725 ZNF221Q9UK13 617 aa10.87□□□□□ -0.67
SNHG1-213ENST00000540725 HSF4Q9ULV5 492 aa10.87□□□□□ -0.67
SNHG1-213ENST00000540725 RYR2Q92736 4967 aa10.87□□□□□ -0.67
SNHG1-213ENST00000540725 IGKV1-6A0A0C4DH72 117 aa10.86□□□□□ -0.67
SNHG1-213ENST00000540725 ARPC1BO15143 372 aaKnown RBP10.86□□□□□ -0.67
SNHG1-213ENST00000540725 SLC25A17O43808 307 aa10.86□□□□□ -0.67
SNHG1-213ENST00000540725 APOA2P02652 100 aa10.86□□□□□ -0.67
SNHG1-213ENST00000540725 VEGFCP49767 419 aa10.86□□□□□ -0.67
SNHG1-213ENST00000540725 TMEM50BP56557 158 aa10.86□□□□□ -0.67
SNHG1-213ENST00000540725 LINC00205P59089 165 aa10.86□□□□□ -0.67
SNHG1-213ENST00000540725 IRF3Q14653 427 aa10.86□□□□□ -0.67
SNHG1-213ENST00000540725 SRSF7Q16629 238 aaKnown RBP eCLIP10.86□□□□□ -0.67
SNHG1-213ENST00000540725 CASC10Q5T4H9 136 aa10.86□□□□□ -0.67
SNHG1-213ENST00000540725 PDPNQ86YL7 162 aa10.86□□□□□ -0.67
SNHG1-213ENST00000540725 GRPEL2Q8TAA5 225 aa10.86□□□□□ -0.67
SNHG1-213ENST00000540725 ARHGAP5-AS1Q96IT6 56 aa10.86□□□□□ -0.67
SNHG1-213ENST00000540725 CMSS1Q9BQ75 279 aaKnown RBP10.86□□□□□ -0.67
SNHG1-213ENST00000540725 SCN3BQ9NY72 215 aa10.86□□□□□ -0.67
SNHG1-213ENST00000540725 SACSQ9NZJ4 4579 aa10.86□□□□□ -0.67
SNHG1-213ENST00000540725 FXYD3Q14802 87 aa10.85□□□□□ -0.67
SNHG1-213ENST00000540725 RAB11BQ15907 218 aa10.85□□□□□ -0.67
SNHG1-213ENST00000540725 TMEM91Q6ZNR0 172 aa10.85□□□□□ -0.67
SNHG1-213ENST00000540725 HAPLN4Q86UW8 402 aa10.85□□□□□ -0.67
SNHG1-213ENST00000540725 POC5Q8NA72 575 aa10.85□□□□□ -0.67
SNHG1-213ENST00000540725 ELOVL1Q9BW60 279 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms