RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 SLC22A5O76082 557 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 OR8U9P0C7N5 309 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 GNG10P50151 68 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 DYNLT3P51808 116 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 RAG2P55895 527 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 BRWD1-AS2P59051 145 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 DHODHQ02127 395 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 DIAPH2-AS1Q14236 149 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 TPTE2P1Q5T6R2 138 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 C16orf87Q6PH81 154 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 ZNF818PQ6ZRF7 136 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 LHFPL4Q7Z7J7 247 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 SLC38A6Q8IZM9 456 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 ZBTB34Q8NCN2 500 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 OR8U1Q8NH10 309 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 MARCH1Q8TCQ1 289 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 CHPT1Q8WUD6 406 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 RTN4IP1Q8WWV3 396 aaPredicted RBP8.52□□□□□ -1.05
VPS33A-204ENST00000540669 LHX4Q969G2 390 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 ABHD14BQ96IU4 210 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 AKR1E2Q96JD6 320 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 SLC2A9Q9NRM0 540 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 FAM212BQ9NTI7 297 aaPredicted RBP8.52□□□□□ -1.05
VPS33A-204ENST00000540669 PIPOXQ9P0Z9 390 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 COPZ2Q9P299 210 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 SCP2D1Q9UJQ7 156 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 AMMECR1Q9Y4X0 333 aaPredicted RBP8.52□□□□□ -1.05
VPS33A-204ENST00000540669 FAM90A9PA6NNJ1 464 aa8.51□□□□□ -1.05
VPS33A-204ENST00000540669 CENPXA8MT69 81 aa8.51□□□□□ -1.05
VPS33A-204ENST00000540669 HSD17B6O14756 317 aa8.51□□□□□ -1.05
VPS33A-204ENST00000540669 RAB29O14966 203 aa8.51□□□□□ -1.05
VPS33A-204ENST00000540669 TXNL1O43396 289 aa8.51□□□□□ -1.05
VPS33A-204ENST00000540669 IGHV3-7P01780 117 aa8.51□□□□□ -1.05
VPS33A-204ENST00000540669 TCRBP04435 133 aa8.51□□□□□ -1.05
VPS33A-204ENST00000540669 IFNA6P05013 189 aa8.51□□□□□ -1.05
VPS33A-204ENST00000540669 FAM157CP0CG43 387 aa8.51□□□□□ -1.05
VPS33A-204ENST00000540669 HTR1DP28221 377 aa8.51□□□□□ -1.05
VPS33A-204ENST00000540669 DUTP33316 252 aaKnown RBP8.51□□□□□ -1.05
VPS33A-204ENST00000540669 DEFA1P59665 94 aa8.51□□□□□ -1.05
VPS33A-204ENST00000540669 DEFA3P59666 94 aa8.51□□□□□ -1.05
VPS33A-204ENST00000540669 HERV-K104P61576 105 aa8.51□□□□□ -1.05
VPS33A-204ENST00000540669 SUPT4H1P63272 117 aaKnown RBP8.51□□□□□ -1.05
VPS33A-204ENST00000540669 AANATQ16613 207 aa8.51□□□□□ -1.05
VPS33A-204ENST00000540669 FAM120AOSQ5T036 256 aa8.51□□□□□ -1.05
VPS33A-204ENST00000540669 FAHD2BQ6P2I3 314 aaPredicted RBP8.51□□□□□ -1.05
VPS33A-204ENST00000540669 OR5AN1Q8NGI8 311 aa8.51□□□□□ -1.05
VPS33A-204ENST00000540669 C17orf50Q8WW18 174 aa8.51□□□□□ -1.05
VPS33A-204ENST00000540669 CREB3L1Q96BA8 519 aa8.51□□□□□ -1.05
VPS33A-204ENST00000540669 FAHD2AQ96GK7 314 aa8.51□□□□□ -1.05
VPS33A-204ENST00000540669 NABP2Q9BQ15 211 aa8.51□□□□□ -1.05
VPS33A-204ENST00000540669 MARVELD1Q9BSK0 173 aa8.51□□□□□ -1.05
VPS33A-204ENST00000540669 ALX4Q9H161 411 aaPredicted RBP8.51□□□□□ -1.05
VPS33A-204ENST00000540669 C20orf85Q9H1P6 137 aa8.51□□□□□ -1.05
VPS33A-204ENST00000540669 CCL28Q9NRJ3 127 aa8.51□□□□□ -1.05
VPS33A-204ENST00000540669 MCUBQ9NWR8 336 aa8.51□□□□□ -1.05
VPS33A-204ENST00000540669 DPM3Q9P2X0 92 aa8.51□□□□□ -1.05
VPS33A-204ENST00000540669 A0A0B4J293 547 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 CRYM-AS1A6NIL9 109 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 LINC00473A8K010 186 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 GPR31O00270 319 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 RBFOX2O43251 390 aaKnown RBP eCLIP8.5□□□□□ -1.05
VPS33A-204ENST00000540669 ARG1P05089 322 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 CT45A6P0DMU7 189 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 CT45A5P0DMU8 189 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 CT45A7P0DMV0 189 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 SPNP16150 400 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 INPP1P49441 399 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 PRRX1P54821 245 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 FXYD4P59646 89 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 UBE2MP61081 183 aaKnown RBP8.5□□□□□ -1.05
VPS33A-204ENST00000540669 TSPAN5P62079 268 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 RPL30P62888 115 aaKnown RBP8.5□□□□□ -1.05
VPS33A-204ENST00000540669 BAMBIQ13145 260 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 EBI3Q14213 229 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 SCGB2B2Q4G0G5 96 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 RPL39P5Q59GN2 51 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 GPR157Q5UAW9 335 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 RUSC1-AS1Q66K80 236 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 MZT2BQ6NZ67 158 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 ZNF66Q6ZN08 573 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 OR8H3Q8N146 312 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 ZNF383Q8NA42 475 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 POC5Q8NA72 575 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 SECTM1Q8WVN6 248 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 TOMM40LQ969M1 308 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 GALNT14Q96FL9 552 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 MRPL20Q9BYC9 149 aaKnown RBP8.5□□□□□ -1.05
VPS33A-204ENST00000540669 SLC5A7Q9GZV3 580 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 MEGF9Q9H1U4 602 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 DPAGT1Q9H3H5 408 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 NUP50Q9UKX7 468 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 NUBP2Q9Y5Y2 271 aa8.5□□□□□ -1.05
VPS33A-204ENST00000540669 IGHV1-3A0A0C4DH29 117 aa8.49□□□□□ -1.05
VPS33A-204ENST00000540669 A0A0U1RQK1 487 aa8.49□□□□□ -1.05
VPS33A-204ENST00000540669 LINC00854A0A1B0GVQ3 168 aa8.49□□□□□ -1.05
VPS33A-204ENST00000540669 C7orf66A4D0T2 115 aa8.49□□□□□ -1.05
VPS33A-204ENST00000540669 LEUTXA8MZ59 168 aa8.49□□□□□ -1.05
VPS33A-204ENST00000540669 PGLYRP1O75594 196 aaPredicted RBP8.49□□□□□ -1.05
VPS33A-204ENST00000540669 IL3RAP26951 378 aa8.49□□□□□ -1.05
VPS33A-204ENST00000540669 GPR12P47775 334 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms