RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 PLSCR4Q9NRQ2 329 aa9.64□□□□□ -0.87
C11orf54-214ENST00000540113 CADP27708 2225 aa9.64□□□□□ -0.87
C11orf54-214ENST00000540113 IGHV3OR15-7A0A075B7D8 119 aa9.63□□□□□ -0.87
C11orf54-214ENST00000540113 IGHV1-18A0A0C4DH31 117 aa9.63□□□□□ -0.87
C11orf54-214ENST00000540113 ACAA1P09110 424 aaPredicted RBP9.63□□□□□ -0.87
C11orf54-214ENST00000540113 NQO2P16083 231 aa9.63□□□□□ -0.87
C11orf54-214ENST00000540113 EGR1P18146 543 aa9.63□□□□□ -0.87
C11orf54-214ENST00000540113 RAB11AP62491 216 aa9.63□□□□□ -0.87
C11orf54-214ENST00000540113 ZNF506Q5JVG8 444 aa9.63□□□□□ -0.87
C11orf54-214ENST00000540113 ZNF787Q6DD87 383 aa9.63□□□□□ -0.87
C11orf54-214ENST00000540113 SLC16A13Q7RTY0 426 aa9.63□□□□□ -0.87
C11orf54-214ENST00000540113 RPRMLQ8N4K4 120 aa9.63□□□□□ -0.87
C11orf54-214ENST00000540113 CD177Q8N6Q3 437 aa9.63□□□□□ -0.87
C11orf54-214ENST00000540113 FAM234AQ9H0X4 552 aa9.63□□□□□ -0.87
C11orf54-214ENST00000540113 DUSP13Q9UII6 198 aa9.63□□□□□ -0.87
C11orf54-214ENST00000540113 ODAMA1E959 279 aa9.63□□□□□ -0.87
C11orf54-214ENST00000540113 TMEM210A6NLX4 147 aa9.63□□□□□ -0.87
C11orf54-214ENST00000540113 LINC00473A8K010 186 aa9.63□□□□□ -0.87
C11orf54-214ENST00000540113 C1QTNF9BB2RNN3 333 aa9.63□□□□□ -0.87
C11orf54-214ENST00000540113 IGLV1-44P01699 117 aa9.63□□□□□ -0.87
C11orf54-214ENST00000540113 PAX6P26367 422 aa9.63□□□□□ -0.87
C11orf54-214ENST00000540113 FABP9Q0Z7S8 132 aa9.63□□□□□ -0.87
C11orf54-214ENST00000540113 FIP1L1Q6UN15 594 aaKnown RBP9.63□□□□□ -0.87
C11orf54-214ENST00000540113 ZNF561Q8N587 486 aa9.63□□□□□ -0.87
C11orf54-214ENST00000540113 OR2Z1Q8NG97 314 aa9.63□□□□□ -0.87
C11orf54-214ENST00000540113 LRRC29Q8WV35 223 aa9.63□□□□□ -0.87
C11orf54-214ENST00000540113 TUBA4BQ9H853 241 aa9.63□□□□□ -0.87
C11orf54-214ENST00000540113 ZNF71Q9NQZ8 489 aaPredicted RBP9.63□□□□□ -0.87
C11orf54-214ENST00000540113 PSG11Q9UQ72 335 aa9.63□□□□□ -0.87
C11orf54-214ENST00000540113 ICE1Q9Y2F5 2266 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 IGHV2OR16-5A0A0B4J2B6 119 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.62□□□□□ -0.87
C11orf54-214ENST00000540113 LOC102723971A0A1B0GUV8 181 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 OOEPA6NGQ2 149 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 C5orf52A6NGY3 159 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 ZG16O60844 167 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 IGKV1D-33P01593 117 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 IGKV1-33P01594 117 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 CXCL1P09341 107 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 DEFA4P12838 97 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 RAB2AP61019 212 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 TNFRSF9Q07011 255 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 SLC38A11Q08AI6 406 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 LRRC75BQ2VPJ9 315 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 Q3ZCU0 254 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 RNF212Q495C1 297 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 IQCF2Q8IXL9 164 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 NINJ1Q92982 152 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 RCC1LQ96I51 464 aaKnown RBP9.62□□□□□ -0.87
C11orf54-214ENST00000540113 BTBD17A6NE02 478 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 AHRRA9YTQ3 701 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 RBMXL2O75526 392 aaKnown RBP9.62□□□□□ -0.87
C11orf54-214ENST00000540113 KITLGP21583 273 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 GCH1P30793 250 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 RPS10P46783 165 aaKnown RBP9.62□□□□□ -0.87
C11orf54-214ENST00000540113 MEOX2P50222 304 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 ZNF83P51522 516 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 UTF1Q5T230 341 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 SLC35E4Q6ICL7 350 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 VHLLQ6RSH7 139 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 MUCL1Q96DR8 90 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 WDR61Q9GZS3 305 aaKnown RBP9.62□□□□□ -0.87
C11orf54-214ENST00000540113 TMPRSS5Q9H3S3 457 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 AKAP13Q12802 2813 aa9.62□□□□□ -0.87
C11orf54-214ENST00000540113 TGIF2-C20orf24A0A0A6YYL0 155 aa9.61□□□□□ -0.87
C11orf54-214ENST00000540113 HSPB1P04792 205 aaKnown RBP9.61□□□□□ -0.87
C11orf54-214ENST00000540113 WNT2P09544 360 aa9.61□□□□□ -0.87
C11orf54-214ENST00000540113 NCMAPQ5T1S8 102 aa9.61□□□□□ -0.87
C11orf54-214ENST00000540113 ZADH2Q8N4Q0 377 aa9.61□□□□□ -0.87
C11orf54-214ENST00000540113 KDF1Q8NAX2 398 aaPredicted RBP9.61□□□□□ -0.87
C11orf54-214ENST00000540113 NANPQ8TBE9 248 aa9.61□□□□□ -0.87
C11orf54-214ENST00000540113 Q8WTZ3 238 aa9.61□□□□□ -0.87
C11orf54-214ENST00000540113 YPEL4Q96NS1 127 aa9.61□□□□□ -0.87
C11orf54-214ENST00000540113 PROCRQ9UNN8 238 aa9.61□□□□□ -0.87
C11orf54-214ENST00000540113 MBD3L4A6NDZ8 208 aaPredicted RBP9.61□□□□□ -0.87
C11orf54-214ENST00000540113 MBD3L3A6NE82 208 aaPredicted RBP9.61□□□□□ -0.87
C11orf54-214ENST00000540113 MBD3L5A6NJ08 208 aaPredicted RBP9.61□□□□□ -0.87
C11orf54-214ENST00000540113 K7EM74 188 aa9.61□□□□□ -0.87
C11orf54-214ENST00000540113 HBE1P02100 147 aa9.61□□□□□ -0.87
C11orf54-214ENST00000540113 ERVFRD-1P60508 538 aa9.61□□□□□ -0.87
C11orf54-214ENST00000540113 HBG1P69891 147 aa9.61□□□□□ -0.87
C11orf54-214ENST00000540113 HBG2P69892 147 aa9.61□□□□□ -0.87
C11orf54-214ENST00000540113 EIF4EBP1Q13541 118 aaPredicted RBP9.61□□□□□ -0.87
C11orf54-214ENST00000540113 ZNF718Q3SXZ3 478 aa9.61□□□□□ -0.87
C11orf54-214ENST00000540113 FAM201AQ5SY85 155 aa9.61□□□□□ -0.87
C11orf54-214ENST00000540113 BHLHA15Q7RTS1 189 aaPredicted RBP9.61□□□□□ -0.87
C11orf54-214ENST00000540113 SSX9Q7RTT3 188 aa9.61□□□□□ -0.87
C11orf54-214ENST00000540113 MBD3L2Q8NHZ7 208 aaPredicted RBP9.61□□□□□ -0.87
C11orf54-214ENST00000540113 TAF15Q92804 592 aaKnown RBP eCLIP9.61□□□□□ -0.87
C11orf54-214ENST00000540113 TVP23CQ96ET8 276 aa9.61□□□□□ -0.87
C11orf54-214ENST00000540113 NIPSNAP3BQ9BS92 247 aa9.61□□□□□ -0.87
C11orf54-214ENST00000540113 LRRC30A6NM36 301 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 RNF212BA8MTL3 300 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 CEBPZOSA8MTT3 80 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 CD200P41217 278 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 TFF3Q07654 80 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 FAM90A2PQ658T7 463 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 ACSM6Q6P461 480 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 IGFL3Q6UXB1 125 aa9.6□□□□□ -0.87
C11orf54-214ENST00000540113 HEPN1Q6WQI6 88 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms