RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 TMEM74BQ9NUR3 256 aa5.26□□□□□ -1.57
PTPRD-214ENST00000540109 F11RQ9Y624 299 aaKnown RBP5.26□□□□□ -1.57
PTPRD-214ENST00000540109 OR2T8A6NH00 312 aa5.26□□□□□ -1.57
PTPRD-214ENST00000540109 OR4C46A6NHA9 309 aa5.26□□□□□ -1.57
PTPRD-214ENST00000540109 SPINT2O43291 252 aa5.26□□□□□ -1.57
PTPRD-214ENST00000540109 ZFAND5O76080 213 aa5.26□□□□□ -1.57
PTPRD-214ENST00000540109 PLAURQ03405 335 aa5.26□□□□□ -1.57
PTPRD-214ENST00000540109 FHL1Q13642 323 aa5.26□□□□□ -1.57
PTPRD-214ENST00000540109 PMS2CLQ68D20 193 aa5.26□□□□□ -1.57
PTPRD-214ENST00000540109 OR5D13Q8NGL4 314 aa5.26□□□□□ -1.57
PTPRD-214ENST00000540109 OR4C3Q8NH37 302 aa5.26□□□□□ -1.57
PTPRD-214ENST00000540109 OR6C1Q96RD1 312 aa5.26□□□□□ -1.57
PTPRD-214ENST00000540109 CST9LQ9H4G1 147 aa5.26□□□□□ -1.57
PTPRD-214ENST00000540109 PRDM13Q9H4Q3 707 aa5.26□□□□□ -1.57
PTPRD-214ENST00000540109 HIF1ANQ9NWT6 349 aa5.26□□□□□ -1.57
PTPRD-214ENST00000540109 KLRF1Q9NZS2 232 aa5.26□□□□□ -1.57
PTPRD-214ENST00000540109 JKAMPQ9P055 326 aa5.26□□□□□ -1.57
PTPRD-214ENST00000540109 SNRNP200O75643 2136 aaKnown RBP5.26□□□□□ -1.57
PTPRD-214ENST00000540109 IGKV1D-42A0A075B6H8 117 aa5.26□□□□□ -1.57
PTPRD-214ENST00000540109 IGSF23A1L1A6 192 aa5.26□□□□□ -1.57
PTPRD-214ENST00000540109 DPRXA6NFQ7 191 aa5.26□□□□□ -1.57
PTPRD-214ENST00000540109 ATP6V0CP27449 155 aa5.26□□□□□ -1.57
PTPRD-214ENST00000540109 MAS1LP35410 378 aa5.26□□□□□ -1.57
PTPRD-214ENST00000540109 SLC25A53Q5H9E4 307 aa5.26□□□□□ -1.57
PTPRD-214ENST00000540109 TMEM211Q6ICI0 200 aa5.26□□□□□ -1.57
PTPRD-214ENST00000540109 H2BFWTQ7Z2G1 175 aa5.26□□□□□ -1.57
PTPRD-214ENST00000540109 SH3BGRL3Q9H299 93 aa5.26□□□□□ -1.57
PTPRD-214ENST00000540109 F5P12259 2224 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 TMED7-TICAM2A0A0A6YYA0 188 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 ZFPL1O95159 310 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 CDKN1BP46527 198 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 KIAA1644Q3SXP7 199 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 C6orf201Q7Z4U5 140 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 HOGA1Q86XE5 327 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 OR8A1Q8NGG7 326 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 OR4X1Q8NH49 305 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 RNF138Q8WVD3 245 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 EGLN1Q9GZT9 426 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 MRPL18Q9H0U6 180 aaKnown RBP5.25□□□□□ -1.57
PTPRD-214ENST00000540109 SSUH2Q9Y2M2 353 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 LOC107984156A0A0G2JMH3 177 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 A0A1B0GWB2 263 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 ODAMA1E959 279 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 C11orf94C9JXX5 98 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 OR2J3O76001 311 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 DXOO77932 396 aaKnown RBP5.25□□□□□ -1.57
PTPRD-214ENST00000540109 CXorf1O96002 111 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 APCSP02743 223 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 RUNX1Q01196 453 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 C1orf140Q5VVS0 124 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 ARL17AQ8IVW1 177 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 DMBX1Q8NFW5 382 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 PRSS3P2Q8NHM4 247 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 MRPL30Q8TCC3 161 aaKnown RBP5.25□□□□□ -1.57
PTPRD-214ENST00000540109 PGLYRP3Q96LB9 341 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 NAA38Q9BRA0 125 aaKnown RBP5.25□□□□□ -1.57
PTPRD-214ENST00000540109 ALKBH4Q9NXW9 302 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 A0A1B0GTI1 187 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 NKX6-3A6NJ46 265 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 ESDP10768 282 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 RAET1LQ5VY80 246 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 ACSM6Q6P461 480 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 UNQ6494/PRO21346Q6UXR6 183 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 HEPN1Q6WQI6 88 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 TCF23Q7RTU1 214 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 ANKRD37Q7Z713 158 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 ADOQ96SZ5 270 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 SLC25A2Q9BXI2 301 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 FOXQ1Q9C009 403 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 HILPDAQ9Y5L2 63 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 HTTP42858 3142 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 CDC14CA4D256 554 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 PAGE4O60829 102 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 CD5P06127 495 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 CXCL1P09341 107 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 ZNF883P0CG24 379 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 FUT6P51993 359 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 RPL18Q07020 188 aaKnown RBP5.25□□□□□ -1.57
PTPRD-214ENST00000540109 IZUMO4Q1ZYL8 232 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 TSPO2Q5TGU0 170 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 H1FNTQ75WM6 255 aaPredicted RBP5.25□□□□□ -1.57
PTPRD-214ENST00000540109 NEU1Q99519 415 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 TMEM38BQ9NVV0 291 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 SIRT4Q9Y6E7 314 aaPredicted RBP5.25□□□□□ -1.57
PTPRD-214ENST00000540109 CHST1O43916 411 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 FAM87AP0C7U9 286 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 SLC38A11Q08AI6 406 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 OR2T6Q8NHC8 308 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 TSPAN32Q96QS1 320 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 TIMP4Q99727 224 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 KLHDC3Q9BQ90 382 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 SH2D2AQ9NP31 389 aa5.25□□□□□ -1.57
PTPRD-214ENST00000540109 IGHV1-69-2A0A0G2JMI3 117 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 TRBV5-5A0A0J9YX44 114 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 SCRG1O75711 98 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 EFNB2P52799 333 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 TMEM30BQ3MIR4 351 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 ZNF841Q6ZN19 808 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 OR5AS1Q8N127 324 aa5.24□□□□□ -1.57
PTPRD-214ENST00000540109 SLC25A45Q8N413 288 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms