RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 RPS4XP62701 263 aaKnown RBP10.77□□□□□ -0.69
DDX55-206ENST00000539934 MAP1LC3CQ9BXW4 147 aa10.77□□□□□ -0.69
DDX55-206ENST00000539934 DEFB126Q9BYW3 111 aa10.77□□□□□ -0.69
DDX55-206ENST00000539934 CYTL1Q9NRR1 136 aa10.77□□□□□ -0.69
DDX55-206ENST00000539934 TMEM106BQ9NUM4 274 aa10.77□□□□□ -0.69
DDX55-206ENST00000539934 B5MCH6 92 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 SPRY1O43609 319 aaPredicted RBP10.76□□□□□ -0.69
DDX55-206ENST00000539934 FOXH1O75593 365 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 HLA-DPB1P04440 258 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 VSIG10L2P0DP72 767 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 MDH2P40926 338 aaKnown RBP10.76□□□□□ -0.69
DDX55-206ENST00000539934 HINT1P49773 126 aaPredicted RBP10.76□□□□□ -0.69
DDX55-206ENST00000539934 GNG4P50150 75 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 ALG10Q5BKT4 473 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 LY6G6FQ5SQ64 297 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 SPATA31B1PQ5VZV4 182 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 CST9LP1Q5W188 147 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 ZNF788Q6ZQV5 615 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 ZNF775Q96BV0 537 aaPredicted RBP10.76□□□□□ -0.69
DDX55-206ENST00000539934 NDFIP1Q9BT67 221 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 RERGLQ9H628 205 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 KLRF1Q9NZS2 232 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 LOC101059948A0A1B0GTJ6 334 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 DAPL1A0PJW8 107 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 TMEM189A5PLL7 270 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 OOEPA6NGQ2 149 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 ZNF878C9JN71 531 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 H3BML4 177 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 J3QRE1 110 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 TRAF3IP2O43734 574 aaPredicted RBP10.76□□□□□ -0.69
DDX55-206ENST00000539934 HYPMO75409 117 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 NRASP01111 189 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 SEC61GP60059 68 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 LTBQ06643 244 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 DCAF12Q5T6F0 453 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 ERASQ7Z444 233 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 KLHDC1Q8N7A1 406 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 PSMF1Q92530 271 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 DNAJA3Q96EY1 480 aa10.76□□□□□ -0.69
DDX55-206ENST00000539934 NEIL1Q96FI4 390 aaPredicted RBP10.76□□□□□ -0.69
DDX55-206ENST00000539934 GPX7Q96SL4 187 aaPredicted RBP10.76□□□□□ -0.69
DDX55-206ENST00000539934 TNRC6AQ8NDV7 1962 aaKnown RBP10.75□□□□□ -0.69
DDX55-206ENST00000539934 TMED7-TICAM2A0A0A6YYA0 188 aa10.75□□□□□ -0.69
DDX55-206ENST00000539934 ASAH2BP0C7U1 165 aa10.75□□□□□ -0.69
DDX55-206ENST00000539934 SNRPBP14678 240 aaKnown RBP10.75□□□□□ -0.69
DDX55-206ENST00000539934 CTXN1P60606 82 aa10.75□□□□□ -0.69
DDX55-206ENST00000539934 ARG2P78540 354 aa10.75□□□□□ -0.69
DDX55-206ENST00000539934 PCOLCEQ15113 449 aa10.75□□□□□ -0.69
DDX55-206ENST00000539934 HIST3H3Q16695 136 aa10.75□□□□□ -0.69
DDX55-206ENST00000539934 ACOT6Q3I5F7 207 aaPredicted RBP10.75□□□□□ -0.69
DDX55-206ENST00000539934 MUC20Q8N307 709 aaPredicted RBP10.75□□□□□ -0.69
DDX55-206ENST00000539934 TMEM99Q8N816 258 aa10.75□□□□□ -0.69
DDX55-206ENST00000539934 OR5D13Q8NGL4 314 aa10.75□□□□□ -0.69
DDX55-206ENST00000539934 TMEM170AQ8WVE7 144 aa10.75□□□□□ -0.69
DDX55-206ENST00000539934 NMNAT3Q96T66 252 aa10.75□□□□□ -0.69
DDX55-206ENST00000539934 TMED7Q9Y3B3 224 aa10.75□□□□□ -0.69
DDX55-206ENST00000539934 TRAV36DV7A0A075B6V5 113 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 LOC102723996A0A087X1L8 192 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 ATP6V0CP27449 155 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 TSPOP30536 169 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 OR3A4PP47883 348 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 TP53I3Q53FA7 332 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 SOHLH1Q5JUK2 328 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 ZNF322Q6U7Q0 402 aaPredicted RBP10.74□□□□□ -0.69
DDX55-206ENST00000539934 ZNF485Q8NCK3 441 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 ZMYND19Q96E35 227 aaPredicted RBP10.74□□□□□ -0.69
DDX55-206ENST00000539934 Q96M85 177 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 SLC25A21Q9BQT8 299 aaPredicted RBP10.74□□□□□ -0.69
DDX55-206ENST00000539934 LIPGQ9Y5X9 500 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 CPAMD8Q8IZJ3 1885 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 TACC2O95359 2948 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 IGHV1-45A0A0A0MS14 117 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 ZNF727A8MUV8 499 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 C21orf140B9A014 251 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.74□□□□□ -0.69
DDX55-206ENST00000539934 ST8SIA3O43173 380 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 ZNF207O43670 478 aaKnown RBP10.74□□□□□ -0.69
DDX55-206ENST00000539934 RAMP1O60894 148 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 KLF7O75840 302 aaPredicted RBP10.74□□□□□ -0.69
DDX55-206ENST00000539934 TRAPPC6AO75865 159 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 STK17BO94768 372 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 CLDN1O95832 211 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 CELP19835 753 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 FOLR3P41439 243 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 ZNF83P51522 516 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 MEF2BQ02080 365 aaPredicted RBP10.74□□□□□ -0.69
DDX55-206ENST00000539934 RPL18Q07020 188 aaKnown RBP10.74□□□□□ -0.69
DDX55-206ENST00000539934 LEG1Q6P5S2 330 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 C19orf35Q6ZS72 473 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 TGIF2LYQ8IUE0 185 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 OR51I2Q9H344 312 aa10.74□□□□□ -0.69
DDX55-206ENST00000539934 BGLAPP02818 100 aa10.73□□□□□ -0.69
DDX55-206ENST00000539934 WNT2P09544 360 aa10.73□□□□□ -0.69
DDX55-206ENST00000539934 NPBWR2P48146 333 aa10.73□□□□□ -0.69
DDX55-206ENST00000539934 HIST1H1AQ02539 215 aaPredicted RBP10.73□□□□□ -0.69
DDX55-206ENST00000539934 RNASEKQ6P5S7 137 aaKnown RBP10.73□□□□□ -0.69
DDX55-206ENST00000539934 RBPMS2Q6ZRY4 209 aaKnown RBP10.73□□□□□ -0.69
DDX55-206ENST00000539934 DEFB125Q8N687 156 aa10.73□□□□□ -0.69
DDX55-206ENST00000539934 LRRC75AQ8NAA5 344 aa10.73□□□□□ -0.69
DDX55-206ENST00000539934 OR10G4Q8NGN3 311 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms