RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 ELOVL1Q9BW60 279 aa11.88□□□□□ -0.51
UBE3B-211ENST00000539843 METTL1Q9UBP6 276 aaKnown RBP11.88□□□□□ -0.51
UBE3B-211ENST00000539843 AK3Q9UIJ7 227 aa11.88□□□□□ -0.51
UBE3B-211ENST00000539843 HSF4Q9ULV5 492 aa11.88□□□□□ -0.51
UBE3B-211ENST00000539843 SLC17A2O00624 439 aa11.87□□□□□ -0.51
UBE3B-211ENST00000539843 TFAP2AP05549 437 aa11.87□□□□□ -0.51
UBE3B-211ENST00000539843 SERPINB10P48595 397 aa11.87□□□□□ -0.51
UBE3B-211ENST00000539843 TPPP2P59282 170 aa11.87□□□□□ -0.51
UBE3B-211ENST00000539843 RPS16P62249 146 aaKnown RBP11.87□□□□□ -0.51
UBE3B-211ENST00000539843 P2RY14Q15391 338 aa11.87□□□□□ -0.51
UBE3B-211ENST00000539843 AKIRIN2Q53H80 203 aa11.87□□□□□ -0.51
UBE3B-211ENST00000539843 CD200R1LQ6Q8B3 271 aa11.87□□□□□ -0.51
UBE3B-211ENST00000539843 PDPNQ86YL7 162 aa11.87□□□□□ -0.51
UBE3B-211ENST00000539843 TMEM203Q969S6 136 aa11.87□□□□□ -0.51
UBE3B-211ENST00000539843 RBMXL1Q96E39 390 aaKnown RBP11.87□□□□□ -0.51
UBE3B-211ENST00000539843 ASCL2Q99929 193 aa11.87□□□□□ -0.51
UBE3B-211ENST00000539843 TOLLIPQ9H0E2 274 aa11.87□□□□□ -0.51
UBE3B-211ENST00000539843 LPAR5Q9H1C0 372 aa11.87□□□□□ -0.51
UBE3B-211ENST00000539843 C3orf84H3BNL1 204 aa11.86□□□□□ -0.51
UBE3B-211ENST00000539843 HSPB1P04792 205 aaKnown RBP11.86□□□□□ -0.51
UBE3B-211ENST00000539843 NDPQ00604 133 aa11.86□□□□□ -0.51
UBE3B-211ENST00000539843 KIAA0141Q14154 515 aaPredicted RBP11.86□□□□□ -0.51
UBE3B-211ENST00000539843 ZNF562Q6V9R5 426 aa11.86□□□□□ -0.51
UBE3B-211ENST00000539843 C5orf24Q7Z6I8 188 aa11.86□□□□□ -0.51
UBE3B-211ENST00000539843 ARPC1AQ92747 370 aa11.86□□□□□ -0.51
UBE3B-211ENST00000539843 CLCC1Q96S66 551 aa11.86□□□□□ -0.51
UBE3B-211ENST00000539843 CENPOQ9BU64 300 aa11.86□□□□□ -0.51
UBE3B-211ENST00000539843 CCDC90BQ9GZT6 254 aa11.86□□□□□ -0.51
UBE3B-211ENST00000539843 C11orf54Q9H0W9 315 aaPredicted RBP11.86□□□□□ -0.51
UBE3B-211ENST00000539843 KCNK15Q9H427 330 aa11.86□□□□□ -0.51
UBE3B-211ENST00000539843 ZNF355PQ9NSJ1 428 aa11.86□□□□□ -0.51
UBE3B-211ENST00000539843 OR1A1Q9P1Q5 309 aa11.86□□□□□ -0.51
UBE3B-211ENST00000539843 C13orf42A0A1B0GVH6 325 aa11.85□□□□□ -0.51
UBE3B-211ENST00000539843 SOCS1O15524 211 aa11.85□□□□□ -0.51
UBE3B-211ENST00000539843 RGS10O43665 173 aa11.85□□□□□ -0.51
UBE3B-211ENST00000539843 CNIH1O95406 144 aa11.85□□□□□ -0.51
UBE3B-211ENST00000539843 CA2P00918 260 aa11.85□□□□□ -0.51
UBE3B-211ENST00000539843 CD3GP09693 182 aa11.85□□□□□ -0.51
UBE3B-211ENST00000539843 GADD45AP24522 165 aa11.85□□□□□ -0.51
UBE3B-211ENST00000539843 VEGFCP49767 419 aa11.85□□□□□ -0.51
UBE3B-211ENST00000539843 SLURP1P55000 103 aa11.85□□□□□ -0.51
UBE3B-211ENST00000539843 QRFPP83859 136 aa11.85□□□□□ -0.51
UBE3B-211ENST00000539843 ASPHD1Q5U4P2 390 aa11.85□□□□□ -0.51
UBE3B-211ENST00000539843 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.85□□□□□ -0.51
UBE3B-211ENST00000539843 LFNGQ8NES3 379 aa11.85□□□□□ -0.51
UBE3B-211ENST00000539843 DLX4Q92988 240 aaPredicted RBP11.85□□□□□ -0.51
UBE3B-211ENST00000539843 PTX4Q96A99 478 aa11.85□□□□□ -0.51
UBE3B-211ENST00000539843 ZMAT4Q9H898 229 aa11.85□□□□□ -0.51
UBE3B-211ENST00000539843 Q9N2K0 584 aa11.85□□□□□ -0.51
UBE3B-211ENST00000539843 LSM2Q9Y333 95 aaKnown RBP11.85□□□□□ -0.51
UBE3B-211ENST00000539843 AK6Q9Y3D8 172 aaKnown RBP11.85□□□□□ -0.51
UBE3B-211ENST00000539843 NUBP2Q9Y5Y2 271 aa11.85□□□□□ -0.51
UBE3B-211ENST00000539843 A0A0G2JLM5 398 aa11.84□□□□□ -0.51
UBE3B-211ENST00000539843 TRDCB7Z8K6 153 aa11.84□□□□□ -0.51
UBE3B-211ENST00000539843 H3BUA1 57 aa11.84□□□□□ -0.51
UBE3B-211ENST00000539843 PDCD5O14737 125 aa11.84□□□□□ -0.51
UBE3B-211ENST00000539843 IGHV3-11P01762 117 aa11.84□□□□□ -0.51
UBE3B-211ENST00000539843 TRGV3P03979 118 aa11.84□□□□□ -0.51
UBE3B-211ENST00000539843 GP9P14770 177 aa11.84□□□□□ -0.51
UBE3B-211ENST00000539843 ZP3P21754 424 aa11.84□□□□□ -0.51
UBE3B-211ENST00000539843 CALRP27797 417 aaKnown RBP11.84□□□□□ -0.51
UBE3B-211ENST00000539843 TAGLNQ01995 201 aaKnown RBP11.84□□□□□ -0.51
UBE3B-211ENST00000539843 MLLT11Q13015 90 aaPredicted RBP11.84□□□□□ -0.51
UBE3B-211ENST00000539843 PSG5Q15238 335 aa11.84□□□□□ -0.51
UBE3B-211ENST00000539843 FAM89BQ8N5H3 189 aa11.84□□□□□ -0.51
UBE3B-211ENST00000539843 OR4A4PQ8NGN8 299 aa11.84□□□□□ -0.51
UBE3B-211ENST00000539843 GRPEL2Q8TAA5 225 aa11.84□□□□□ -0.51
UBE3B-211ENST00000539843 ARHGAP5-AS1Q96IT6 56 aa11.84□□□□□ -0.51
UBE3B-211ENST00000539843 TMEM68Q96MH6 324 aa11.84□□□□□ -0.51
UBE3B-211ENST00000539843 MS4A10Q96PG2 267 aa11.84□□□□□ -0.51
UBE3B-211ENST00000539843 AGMATQ9BSE5 352 aa11.84□□□□□ -0.51
UBE3B-211ENST00000539843 HDHD3Q9BSH5 251 aaPredicted RBP11.84□□□□□ -0.51
UBE3B-211ENST00000539843 FAM103A1Q9BTL3 118 aaKnown RBP11.84□□□□□ -0.51
UBE3B-211ENST00000539843 ALX4Q9H161 411 aaPredicted RBP11.84□□□□□ -0.51
UBE3B-211ENST00000539843 VCX3BQ9H321 246 aa11.84□□□□□ -0.51
UBE3B-211ENST00000539843 ACOT13Q9NPJ3 140 aa11.84□□□□□ -0.51
UBE3B-211ENST00000539843 SLC35D1Q9NTN3 355 aa11.84□□□□□ -0.51
UBE3B-211ENST00000539843 RDH8Q9NYR8 311 aa11.84□□□□□ -0.51
UBE3B-211ENST00000539843 FBXO7Q9Y3I1 522 aa11.84□□□□□ -0.51
UBE3B-211ENST00000539843 RBM7Q9Y580 266 aaKnown RBP11.84□□□□□ -0.51
UBE3B-211ENST00000539843 IGHV4OR15-8A0A075B7B6 117 aa11.83□□□□□ -0.52
UBE3B-211ENST00000539843 A0A087WW49 117 aa11.83□□□□□ -0.52
UBE3B-211ENST00000539843 A0A0A6YYD4 124 aa11.83□□□□□ -0.52
UBE3B-211ENST00000539843 M0R1X1 148 aa11.83□□□□□ -0.52
UBE3B-211ENST00000539843 DENRO43583 198 aaKnown RBP11.83□□□□□ -0.52
UBE3B-211ENST00000539843 SOX15O60248 233 aa11.83□□□□□ -0.52
UBE3B-211ENST00000539843 SCTP09683 121 aa11.83□□□□□ -0.52
UBE3B-211ENST00000539843 LGALS7P47929 136 aa11.83□□□□□ -0.52
UBE3B-211ENST00000539843 TPBGQ13641 420 aa11.83□□□□□ -0.52
UBE3B-211ENST00000539843 FXYD3Q14802 87 aa11.83□□□□□ -0.52
UBE3B-211ENST00000539843 RTL8BQ17RB0 113 aa11.83□□□□□ -0.52
UBE3B-211ENST00000539843 MOGAT2Q3SYC2 334 aa11.83□□□□□ -0.52
UBE3B-211ENST00000539843 C19orf54Q5BKX5 351 aa11.83□□□□□ -0.52
UBE3B-211ENST00000539843 ACSM6Q6P461 480 aa11.83□□□□□ -0.52
UBE3B-211ENST00000539843 ANKRD13BQ86YJ7 626 aa11.83□□□□□ -0.52
UBE3B-211ENST00000539843 POC5Q8NA72 575 aa11.83□□□□□ -0.52
UBE3B-211ENST00000539843 DRAXINQ8NBI3 349 aaPredicted RBP11.83□□□□□ -0.52
UBE3B-211ENST00000539843 OR10J5Q8NHC4 309 aa11.83□□□□□ -0.52
UBE3B-211ENST00000539843 CASTOR1Q8WTX7 329 aa11.83□□□□□ -0.52
UBE3B-211ENST00000539843 FAM3DQ96BQ1 224 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms