RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 MPPED1O15442 326 aa7.48□□□□□ -1.21
RTN4IP1-204ENST00000539449 SSNA1O43805 119 aa7.48□□□□□ -1.21
RTN4IP1-204ENST00000539449 HLA-AP01891 365 aaKnown RBP7.48□□□□□ -1.21
RTN4IP1-204ENST00000539449 OR5AC1P0C628 307 aa7.48□□□□□ -1.21
RTN4IP1-204ENST00000539449 IGHV1-8P0DP01 117 aa7.48□□□□□ -1.21
RTN4IP1-204ENST00000539449 TMEM187Q14656 261 aa7.48□□□□□ -1.21
RTN4IP1-204ENST00000539449 ABCA11PQ4W5N1 156 aa7.48□□□□□ -1.21
RTN4IP1-204ENST00000539449 RPL39P5Q59GN2 51 aa7.48□□□□□ -1.21
RTN4IP1-204ENST00000539449 CD276Q5ZPR3 534 aa7.48□□□□□ -1.21
RTN4IP1-204ENST00000539449 HCP5Q6MZN7 132 aa7.48□□□□□ -1.21
RTN4IP1-204ENST00000539449 LPCAT3Q6P1A2 487 aa7.48□□□□□ -1.21
RTN4IP1-204ENST00000539449 FAHD2BQ6P2I3 314 aaPredicted RBP7.48□□□□□ -1.21
RTN4IP1-204ENST00000539449 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.48□□□□□ -1.215e-6■■■■□ 22.8
RTN4IP1-204ENST00000539449 BVESQ8NE79 360 aa7.48□□□□□ -1.21
RTN4IP1-204ENST00000539449 OR2AK2Q8NG84 335 aa7.48□□□□□ -1.21
RTN4IP1-204ENST00000539449 OR10A7Q8NGE5 316 aa7.48□□□□□ -1.21
RTN4IP1-204ENST00000539449 LHFPL5Q8TAF8 219 aa7.48□□□□□ -1.21
RTN4IP1-204ENST00000539449 FAHD2AQ96GK7 314 aa7.48□□□□□ -1.21
RTN4IP1-204ENST00000539449 ZNF251Q9BRH9 671 aa7.48□□□□□ -1.21
RTN4IP1-204ENST00000539449 LPAR2Q9HBW0 351 aa7.48□□□□□ -1.21
RTN4IP1-204ENST00000539449 SDHAF2Q9NX18 166 aa7.48□□□□□ -1.21
RTN4IP1-204ENST00000539449 ONECUT1Q9UBC0 465 aa7.48□□□□□ -1.21
RTN4IP1-204ENST00000539449 MGAT4CQ9UBM8 478 aa7.48□□□□□ -1.21
RTN4IP1-204ENST00000539449 LINC00473A8K010 186 aa7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 A8MXK9 166 aa7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 ITGB1BP1O14713 200 aa7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 CREBL2O60519 120 aaPredicted RBP7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 DUS4LO95620 317 aaKnown RBP7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 LIPFP07098 398 aa7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 CD34P28906 385 aa7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 BRWD1-AS2P59051 145 aa7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 CD83Q01151 205 aa7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 KRTAP1-1Q07627 177 aa7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 KLRD1Q13241 179 aa7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 DIAPH2-AS1Q14236 149 aa7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 Q3ZCU0 254 aa7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 LY6G6FQ5SQ64 297 aa7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 DCAF12L2Q5VW00 463 aa7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 SLC25A48Q6ZT89 311 aaKnown RBP7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 KCTD9Q7L273 389 aa7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 SGPP2Q8IWX5 399 aa7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 LRRC75A-AS1Q8N1F1 130 aa7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 ZNF645Q8N7E2 425 aa7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 GLYATL2Q8WU03 294 aa7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 MITD1Q8WV92 249 aa7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 ZNF486Q96H40 463 aaPredicted RBP7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 FYTTD1Q96QD9 318 aaKnown RBP7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 ABHD14AQ9BUJ0 271 aa7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 RANGRFQ9HD47 186 aaPredicted RBP7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 PIPOXQ9P0Z9 390 aa7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 SESN1Q9Y6P5 492 aa7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 WNK2Q9Y3S1 2297 aa7.47□□□□□ -1.21
RTN4IP1-204ENST00000539449 MGAM2Q2M2H8 2515 aa7.46□□□□□ -1.21
RTN4IP1-204ENST00000539449 A0A087X0M5 115 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 SAA2-SAA4A0A096LPE2 208 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 IGHV2-70DA0A0C4DH43 119 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 C3orf85A0A1B0GTC6 90 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 A0A1B0GX30 115 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 DBX1A6NMT0 343 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 MPTX1A8MV57 137 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 SMLR1H3BR10 107 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 J3QR06 171 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 GOSR2O14653 212 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 PFDN1O60925 122 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 ADAP1O75689 374 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 CCNKO75909 580 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 RGS11O94810 467 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 IGKV1-39P01597 117 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 IGKV1D-39P04432 117 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 TRAPPC2P0DI81 140 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 TRAPPC2BP0DI82 140 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 SAA2P0DJI9 122 aaPredicted RBP7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 COX7A1P24310 79 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 GPR12P47775 334 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 DSCR9P59020 149 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 ZNF585BQ52M93 769 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 OR2B11Q5JQS5 317 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 LDLRAD2Q5SZI1 272 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 NCR3LG1Q68D85 454 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 PRSS57Q6UWY2 283 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 LYG1Q8N1E2 194 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 ABHD12Q8N2K0 398 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 PNKDQ8N490 385 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 CCDC71LQ8N9Z2 235 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 DRAXINQ8NBI3 349 aaPredicted RBP7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 MAPK1IP1LQ8NDC0 245 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 OR51H1Q8NH63 302 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 ZNF596Q8TC21 504 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 EDARADDQ8WWZ3 215 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 TNFRSF14Q92956 283 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 RAB39BQ96DA2 213 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 MSI2Q96DH6 328 aaKnown RBP7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 GALNT14Q96FL9 552 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 AKR1E2Q96JD6 320 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 DMRTB1Q96MA1 342 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 C19orf24Q9BVV8 132 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 CHIAQ9BZP6 476 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 SIRPDQ9H106 197 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 TMEM133Q9H2Q1 129 aa7.46□□□□□ -1.22
RTN4IP1-204ENST00000539449 RAB9BQ9NP90 201 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms