RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 SUPT4H1P63272 117 aaKnown RBP8.69□□□□□ -1.02
LEMD3-202ENST00000539442 PAX8Q06710 450 aa8.69□□□□□ -1.02
LEMD3-202ENST00000539442 CATR1Q13166 79 aa8.69□□□□□ -1.02
LEMD3-202ENST00000539442 CBX3Q13185 183 aa8.69□□□□□ -1.02
LEMD3-202ENST00000539442 HLA-DRB5Q30154 266 aa8.69□□□□□ -1.02
LEMD3-202ENST00000539442 UTF1Q5T230 341 aa8.69□□□□□ -1.02
LEMD3-202ENST00000539442 VMO1Q7Z5L0 202 aa8.69□□□□□ -1.02
LEMD3-202ENST00000539442 TBC1D26Q86UD7 250 aa8.69□□□□□ -1.02
LEMD3-202ENST00000539442 LYG1Q8N1E2 194 aa8.69□□□□□ -1.02
LEMD3-202ENST00000539442 TCTEX1D1Q8N7M0 179 aa8.69□□□□□ -1.02
LEMD3-202ENST00000539442 OR11H6Q8NGC7 330 aa8.69□□□□□ -1.02
LEMD3-202ENST00000539442 TMEM186Q96B77 213 aa8.69□□□□□ -1.02
LEMD3-202ENST00000539442 ABHD14BQ96IU4 210 aa8.69□□□□□ -1.02
LEMD3-202ENST00000539442 S1PR3Q99500 378 aa8.69□□□□□ -1.02
LEMD3-202ENST00000539442 HSD17B10Q99714 261 aaKnown RBP8.69□□□□□ -1.02
LEMD3-202ENST00000539442 LPAR2Q9HBW0 351 aa8.69□□□□□ -1.02
LEMD3-202ENST00000539442 SDHAF2Q9NX18 166 aa8.69□□□□□ -1.02
LEMD3-202ENST00000539442 SHPKQ9UHJ6 478 aa8.69□□□□□ -1.02
LEMD3-202ENST00000539442 RNF150Q9ULK6 438 aa8.69□□□□□ -1.02
LEMD3-202ENST00000539442 AMMECR1Q9Y4X0 333 aaPredicted RBP8.69□□□□□ -1.02
LEMD3-202ENST00000539442 HECTD1Q9ULT8 2610 aa8.69□□□□□ -1.02
LEMD3-202ENST00000539442 SAA2-SAA4A0A096LPE2 208 aa8.68□□□□□ -1.02
LEMD3-202ENST00000539442 PIGBOS1A0A0B4J2F0 54 aa8.68□□□□□ -1.02
LEMD3-202ENST00000539442 C3orf85A0A1B0GTC6 90 aa8.68□□□□□ -1.02
LEMD3-202ENST00000539442 A0A1W2PPE3 182 aa8.68□□□□□ -1.02
LEMD3-202ENST00000539442 H0Y980 276 aa8.68□□□□□ -1.02
LEMD3-202ENST00000539442 IFNA2P01563 188 aa8.68□□□□□ -1.02
LEMD3-202ENST00000539442 IGLV1-47P01700 117 aa8.68□□□□□ -1.02
LEMD3-202ENST00000539442 TRAPPC2P0DI81 140 aa8.68□□□□□ -1.02
LEMD3-202ENST00000539442 TRAPPC2BP0DI82 140 aa8.68□□□□□ -1.02
LEMD3-202ENST00000539442 SAA2P0DJI9 122 aaPredicted RBP8.68□□□□□ -1.02
LEMD3-202ENST00000539442 F2RP25116 425 aa8.68□□□□□ -1.02
LEMD3-202ENST00000539442 GZMKP49863 264 aa8.68□□□□□ -1.02
LEMD3-202ENST00000539442 BCAP31P51572 246 aa8.68□□□□□ -1.02
LEMD3-202ENST00000539442 SRPXP78539 464 aa8.68□□□□□ -1.02
LEMD3-202ENST00000539442 EIF4EBP1Q13541 118 aaPredicted RBP8.68□□□□□ -1.02
LEMD3-202ENST00000539442 DCAF12L2Q5VW00 463 aa8.68□□□□□ -1.02
LEMD3-202ENST00000539442 ODF3L1Q8IXM7 274 aa8.68□□□□□ -1.02
LEMD3-202ENST00000539442 CADM3Q8N126 398 aa8.68□□□□□ -1.02
LEMD3-202ENST00000539442 OR52B4Q8NGK2 314 aa8.68□□□□□ -1.02
LEMD3-202ENST00000539442 OR10X1Q8NGY0 326 aa8.68□□□□□ -1.02
LEMD3-202ENST00000539442 COQ8AQ8NI60 647 aa8.68□□□□□ -1.02
LEMD3-202ENST00000539442 CHAC2Q8WUX2 184 aa8.68□□□□□ -1.02
LEMD3-202ENST00000539442 MITD1Q8WV92 249 aa8.68□□□□□ -1.02
LEMD3-202ENST00000539442 C5orf30Q96GV9 206 aa8.68□□□□□ -1.02
LEMD3-202ENST00000539442 PHB2Q99623 299 aa8.68□□□□□ -1.02
LEMD3-202ENST00000539442 ZNF251Q9BRH9 671 aa8.68□□□□□ -1.02
LEMD3-202ENST00000539442 SIRT7Q9NRC8 400 aa8.68□□□□□ -1.02
LEMD3-202ENST00000539442 FAM212BQ9NTI7 297 aaPredicted RBP8.68□□□□□ -1.02
LEMD3-202ENST00000539442 LIN7CQ9NUP9 197 aaKnown RBP8.68□□□□□ -1.02
LEMD3-202ENST00000539442 ODF3BA8MYP8 253 aa8.67□□□□□ -1.02
LEMD3-202ENST00000539442 M0R1X1 148 aa8.67□□□□□ -1.02
LEMD3-202ENST00000539442 TNFSF12O43508 249 aa8.67□□□□□ -1.02
LEMD3-202ENST00000539442 SSNA1O43805 119 aa8.67□□□□□ -1.02
LEMD3-202ENST00000539442 OR5AC1P0C628 307 aa8.67□□□□□ -1.02
LEMD3-202ENST00000539442 HOXB4P17483 251 aaPredicted RBP8.67□□□□□ -1.02
LEMD3-202ENST00000539442 COX7A1P24310 79 aa8.67□□□□□ -1.02
LEMD3-202ENST00000539442 DUTP33316 252 aaKnown RBP8.67□□□□□ -1.02
LEMD3-202ENST00000539442 RRAS2P62070 204 aaPredicted RBP8.67□□□□□ -1.02
LEMD3-202ENST00000539442 SLC9A3R2Q15599 337 aa8.67□□□□□ -1.02
LEMD3-202ENST00000539442 TMEM249Q2WGJ8 235 aa8.67□□□□□ -1.02
LEMD3-202ENST00000539442 RPL39P5Q59GN2 51 aa8.67□□□□□ -1.02
LEMD3-202ENST00000539442 HCP5Q6MZN7 132 aa8.67□□□□□ -1.02
LEMD3-202ENST00000539442 ZNF833PQ6ZTB9 187 aa8.67□□□□□ -1.02
LEMD3-202ENST00000539442 PNKDQ8N490 385 aa8.67□□□□□ -1.02
LEMD3-202ENST00000539442 C12orf45Q8N5I9 185 aaPredicted RBP8.67□□□□□ -1.02
LEMD3-202ENST00000539442 LRTM2Q8N967 370 aa8.67□□□□□ -1.02
LEMD3-202ENST00000539442 WFDC11Q8NEX6 87 aa8.67□□□□□ -1.02
LEMD3-202ENST00000539442 CASTOR1Q8WTX7 329 aa8.67□□□□□ -1.02
LEMD3-202ENST00000539442 ADTRPQ96IZ2 230 aa8.67□□□□□ -1.02
LEMD3-202ENST00000539442 TBX15Q96SF7 602 aa8.67□□□□□ -1.02
LEMD3-202ENST00000539442 PCGF1Q9BSM1 259 aa8.67□□□□□ -1.02
LEMD3-202ENST00000539442 MED28Q9H204 178 aa8.67□□□□□ -1.02
LEMD3-202ENST00000539442 RNASEK-C17orf49H0YIS7 233 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 BUB1B-PAK6H3BSN5 160 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 J3QLI3 93 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 TXNL1O43396 289 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 PROP1O75360 226 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 IGHV4-31P0DP07 118 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 UCP1P25874 307 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 HTR1DP28221 377 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 KIR2DS2P43631 304 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 THBS3P49746 956 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 UBE2E1P51965 193 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 TMEM187Q14656 261 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 MINOS1Q5TGZ0 78 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 LGI3Q8N145 548 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 OR4P4Q8NGL7 312 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 OR51H1Q8NH63 302 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 CD300LFQ8TDQ1 290 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 TCTEX1D2Q8WW35 142 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 IL22RA2Q969J5 263 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 ST6GALNAC6Q969X2 333 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 MSI2Q96DH6 328 aaKnown RBP8.66□□□□□ -1.02
LEMD3-202ENST00000539442 TP53RKQ96S44 253 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 TMEM222Q9H0R3 208 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 HIF1ANQ9NWT6 349 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 ZNRD1Q9P1U0 126 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 PRELID3BQ9Y3B1 194 aa8.66□□□□□ -1.02
LEMD3-202ENST00000539442 AUP1Q9Y679 476 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms