RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 LAX1Q8IWV1 398 aa12.52□□□□□ -0.41
RPAIN-206ENST00000539417 C5orf56Q8N8D9 126 aa12.52□□□□□ -0.41
RPAIN-206ENST00000539417 BCL7BQ9BQE9 202 aa12.52□□□□□ -0.41
RPAIN-206ENST00000539417 GINS4Q9BRT9 223 aa12.52□□□□□ -0.41
RPAIN-206ENST00000539417 PRSS22Q9GZN4 317 aa12.52□□□□□ -0.41
RPAIN-206ENST00000539417 OR2D2Q9H210 308 aa12.52□□□□□ -0.41
RPAIN-206ENST00000539417 MOB4Q9Y3A3 225 aa12.52□□□□□ -0.41
RPAIN-206ENST00000539417 A0A1B0GUS0 222 aa12.51□□□□□ -0.41
RPAIN-206ENST00000539417 LINC01548A6NM66 108 aa12.51□□□□□ -0.41
RPAIN-206ENST00000539417 FAM25AB3EWG3 89 aa12.51□□□□□ -0.41
RPAIN-206ENST00000539417 FAM25CB3EWG5 89 aa12.51□□□□□ -0.41
RPAIN-206ENST00000539417 FAM25GB3EWG6 89 aa12.51□□□□□ -0.41
RPAIN-206ENST00000539417 DIRAS3O95661 229 aa12.51□□□□□ -0.41
RPAIN-206ENST00000539417 MOSP00540 346 aa12.51□□□□□ -0.41
RPAIN-206ENST00000539417 LPLP06858 475 aa12.51□□□□□ -0.41
RPAIN-206ENST00000539417 GPR12P47775 334 aa12.51□□□□□ -0.41
RPAIN-206ENST00000539417 MZT2AQ6P582 158 aa12.51□□□□□ -0.41
RPAIN-206ENST00000539417 Q8N9W7 124 aa12.51□□□□□ -0.41
RPAIN-206ENST00000539417 ZNF383Q8NA42 475 aa12.51□□□□□ -0.41
RPAIN-206ENST00000539417 OR2T10Q8NGZ9 312 aa12.51□□□□□ -0.41
RPAIN-206ENST00000539417 OR2T6Q8NHC8 308 aa12.51□□□□□ -0.41
RPAIN-206ENST00000539417 AP3S1Q92572 193 aa12.51□□□□□ -0.41
RPAIN-206ENST00000539417 SLIRPQ9GZT3 109 aaKnown RBP12.51□□□□□ -0.41
RPAIN-206ENST00000539417 SDHAF2Q9NX18 166 aa12.51□□□□□ -0.41
RPAIN-206ENST00000539417 CCDC59Q9P031 241 aaKnown RBP12.51□□□□□ -0.41
RPAIN-206ENST00000539417 ANAPC10Q9UM13 185 aa12.51□□□□□ -0.41
RPAIN-206ENST00000539417 H0YJW9 148 aa12.5□□□□□ -0.41
RPAIN-206ENST00000539417 RNASE12Q5GAN4 147 aaKnown RBP12.5□□□□□ -0.41
RPAIN-206ENST00000539417 FAM71F2Q6NXP2 309 aa12.5□□□□□ -0.41
RPAIN-206ENST00000539417 KLHDC1Q8N7A1 406 aa12.5□□□□□ -0.41
RPAIN-206ENST00000539417 S1PR3Q99500 378 aa12.5□□□□□ -0.41
RPAIN-206ENST00000539417 EXTL2Q9UBQ6 330 aa12.5□□□□□ -0.41
RPAIN-206ENST00000539417 NCBP2LA6PVI3 153 aaKnown RBP12.49□□□□□ -0.41
RPAIN-206ENST00000539417 M0R1X1 148 aa12.49□□□□□ -0.41
RPAIN-206ENST00000539417 TUSC2O75896 110 aa12.49□□□□□ -0.41
RPAIN-206ENST00000539417 IGLV2-14P01704 120 aa12.49□□□□□ -0.41
RPAIN-206ENST00000539417 VSIG10L2P0DP72 767 aa12.49□□□□□ -0.41
RPAIN-206ENST00000539417 PRSS3P35030 304 aa12.49□□□□□ -0.41
RPAIN-206ENST00000539417 SOX6P35712 828 aa12.49□□□□□ -0.41
RPAIN-206ENST00000539417 C9orf152Q5JTZ5 239 aa12.49□□□□□ -0.41
RPAIN-206ENST00000539417 C10orf99Q6UWK7 81 aa12.49□□□□□ -0.41
RPAIN-206ENST00000539417 LYSMD2Q8IV50 215 aa12.49□□□□□ -0.41
RPAIN-206ENST00000539417 C11orf44Q8N8P7 122 aa12.49□□□□□ -0.41
RPAIN-206ENST00000539417 GPX8Q8TED1 209 aa12.49□□□□□ -0.41
RPAIN-206ENST00000539417 ABHD1Q96SE0 405 aa12.49□□□□□ -0.41
RPAIN-206ENST00000539417 CITED1Q99966 193 aa12.49□□□□□ -0.41
RPAIN-206ENST00000539417 ZNF221Q9UK13 617 aa12.49□□□□□ -0.41
RPAIN-206ENST00000539417 CCDC160A6NGH7 325 aa12.48□□□□□ -0.41
RPAIN-206ENST00000539417 NOL3O60936 208 aaKnown RBP12.48□□□□□ -0.41
RPAIN-206ENST00000539417 ARPC4P59998 168 aa12.48□□□□□ -0.41
RPAIN-206ENST00000539417 ACTBP60709 375 aa12.48□□□□□ -0.41
RPAIN-206ENST00000539417 OR5AN1Q8NGI8 311 aa12.48□□□□□ -0.41
RPAIN-206ENST00000539417 WIPF2Q8TF74 440 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-206ENST00000539417 AKR1E2Q96JD6 320 aa12.48□□□□□ -0.41
RPAIN-206ENST00000539417 WNT10AQ9GZT5 417 aa12.48□□□□□ -0.41
RPAIN-206ENST00000539417 IFT46Q9NQC8 304 aa12.48□□□□□ -0.41
RPAIN-206ENST00000539417 OR2W1Q9Y3N9 320 aa12.48□□□□□ -0.41
RPAIN-206ENST00000539417 RGS5O15539 181 aa12.47□□□□□ -0.41
RPAIN-206ENST00000539417 FGF16O43320 207 aa12.47□□□□□ -0.41
RPAIN-206ENST00000539417 PMP2P02689 132 aa12.47□□□□□ -0.41
RPAIN-206ENST00000539417 IGKV1-16P04430 117 aa12.47□□□□□ -0.41
RPAIN-206ENST00000539417 CTXN2P0C2S0 81 aa12.47□□□□□ -0.41
RPAIN-206ENST00000539417 NAT1P18440 290 aa12.47□□□□□ -0.41
RPAIN-206ENST00000539417 AADACP22760 399 aa12.47□□□□□ -0.41
RPAIN-206ENST00000539417 FCGR2CP31995 323 aa12.47□□□□□ -0.41
RPAIN-206ENST00000539417 VDAC2P45880 294 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-206ENST00000539417 CBX5P45973 191 aa12.47□□□□□ -0.41
RPAIN-206ENST00000539417 RFX2P48378 723 aa12.47□□□□□ -0.41
RPAIN-206ENST00000539417 SHISA2Q6UWI4 295 aa12.47□□□□□ -0.41
RPAIN-206ENST00000539417 FAM71E2Q8N5Q1 922 aa12.47□□□□□ -0.41
RPAIN-206ENST00000539417 OR5AP2Q8NGF4 316 aa12.47□□□□□ -0.41
RPAIN-206ENST00000539417 GPHA2Q96T91 129 aa12.47□□□□□ -0.41
RPAIN-206ENST00000539417 HSPB9Q9BQS6 159 aa12.47□□□□□ -0.41
RPAIN-206ENST00000539417 DCUN1D5Q9BTE7 237 aa12.47□□□□□ -0.41
RPAIN-206ENST00000539417 GHITMQ9H3K2 345 aa12.47□□□□□ -0.41
RPAIN-206ENST00000539417 PTTG2Q9NZH5 202 aa12.47□□□□□ -0.41
RPAIN-206ENST00000539417 LINC00527Q9UJ94 153 aa12.47□□□□□ -0.41
RPAIN-206ENST00000539417 GAB2Q9UQC2 676 aa12.47□□□□□ -0.41
RPAIN-206ENST00000539417 RBM7Q9Y580 266 aaKnown RBP12.47□□□□□ -0.41
RPAIN-206ENST00000539417 VWFP04275 2813 aa12.47□□□□□ -0.41
RPAIN-206ENST00000539417 LINC00473A8K010 186 aa12.46□□□□□ -0.41
RPAIN-206ENST00000539417 ZNF701M0R085 212 aaPredicted RBP12.46□□□□□ -0.41
RPAIN-206ENST00000539417 OR5H8P0DN80 308 aa12.46□□□□□ -0.41
RPAIN-206ENST00000539417 CDK10Q15131 360 aa12.46□□□□□ -0.41
RPAIN-206ENST00000539417 ARSJQ5FYB0 599 aaPredicted RBP12.46□□□□□ -0.41
RPAIN-206ENST00000539417 OR52I2Q8NH67 350 aa12.46□□□□□ -0.41
RPAIN-206ENST00000539417 NOL4LQ96MY1 436 aaPredicted RBP12.46□□□□□ -0.41
RPAIN-206ENST00000539417 NXF2Q9GZY0 626 aaKnown RBP12.46□□□□□ -0.41
RPAIN-206ENST00000539417 RSL24D1Q9UHA3 163 aaKnown RBP12.46□□□□□ -0.41
RPAIN-206ENST00000539417 PKD1L1Q8TDX9 2849 aa12.46□□□□□ -0.41
RPAIN-206ENST00000539417 M0QZK8 103 aa12.46□□□□□ -0.42
RPAIN-206ENST00000539417 PEX14O75381 377 aa12.46□□□□□ -0.42
RPAIN-206ENST00000539417 CD28P10747 220 aa12.46□□□□□ -0.42
RPAIN-206ENST00000539417 HLA-DMAP28067 261 aa12.46□□□□□ -0.42
RPAIN-206ENST00000539417 LUMP51884 338 aaPredicted RBP12.46□□□□□ -0.42
RPAIN-206ENST00000539417 RPL30P62888 115 aaKnown RBP12.46□□□□□ -0.42
RPAIN-206ENST00000539417 MMDQ15546 238 aa12.46□□□□□ -0.42
RPAIN-206ENST00000539417 ZNF660Q6AZW8 331 aaPredicted RBP12.46□□□□□ -0.42
RPAIN-206ENST00000539417 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.46□□□□□ -0.42
RPAIN-206ENST00000539417 C6orf62Q9GZU0 229 aaPredicted RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms