RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 FGF23Q9GZV9 251 aaPredicted RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 NXF2Q9GZY0 626 aaKnown RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 SLC22A4Q9H015 551 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 CXCL16Q9H2A7 254 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 ARV1Q9H2C2 271 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 SND1-IT1Q9HBX3 110 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 RGS18Q9NS28 235 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 COA4Q9NYJ1 87 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 MARCOQ9UEW3 520 aaPredicted RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 FIS1Q9Y3D6 152 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 FAM215AQ9Y5M1 114 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 CPAMD8Q8IZJ3 1885 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 KDM6AO15550 1401 aaPredicted RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 WRNQ14191 1432 aaPredicted RBP eCLIP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 DOCK2Q92608 1830 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 ARFGEF1Q9Y6D6 1849 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 PDE4DIPQ5VU43 2346 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 MYH11P35749 1972 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 EML6Q6ZMW3 1958 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 SMIM9A6NGZ8 99 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 F5H5P2 479 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 CXCR6O00574 342 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 MAGEB4O15481 346 aaPredicted RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 CHST10O43529 356 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF324O75467 553 aaPredicted RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 DHRS3O75911 302 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 MT-CO2P00403 227 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 CD5P06127 495 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 PFN1P07737 140 aaKnown RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 CALM1P0DP23 149 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 CALM2P0DP24 149 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 CALM3P0DP25 149 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 HIST1H1EP10412 219 aaKnown RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF708P17019 499 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 SRIP30626 198 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 KRTAP12-2P59991 146 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 HIST1H4AP62805 103 aaKnown RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 SARNPP82979 210 aaKnown RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 TMEM236Q5W0B7 351 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 PRSS54Q6PEW0 395 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 IGFL1Q6UW32 110 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 OAFQ86UD1 273 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 Q8N7P7 452 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 CMTM2Q8TAZ6 248 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 FAM3DQ96BQ1 224 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 SCGB3A2Q96PL1 93 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 OR7D2Q96RA2 312 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 HOPXQ9BPY8 73 aaPredicted RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 TMEM109Q9BVC6 243 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 TSSK6Q9BXA6 273 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 DHX35Q9H5Z1 703 aaKnown RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 C8orf17Q9NRJ1 99 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF355PQ9NSJ1 428 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 DMAC2Q9NW81 257 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 STOML2Q9UJZ1 356 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF222Q9UK12 451 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 OR52A1Q9UKL2 312 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 CELA1Q9UNI1 258 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 FMN1Q68DA7 1419 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 PRG4Q92954 1404 aaPredicted RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 TRAPPC8Q9Y2L5 1435 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 HELZ2Q9BYK8 2649 aaKnown RBP0.6□□□□□ -2.31
HIF1A-204ENST00000539097 ABCA2Q9BZC7 2435 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 ARFGEF2Q9Y6D5 1785 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 MEIKINA0A087WXM9 373 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 TRBV6-6A0A0A6YYG2 114 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 IGHV2-26A0A0B4J1V2 119 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 LEUTXA8MZ59 168 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 LINC00587B1AMM8 73 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 TGOLN2O43493 480 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 BCHEP06276 602 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 INAFM2P0DMQ5 153 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 PSG2P11465 335 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 IFI30P13284 250 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 CTSEP14091 401 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 CSRP1P21291 193 aaKnown RBP0.6□□□□□ -2.31
HIF1A-204ENST00000539097 IDH3GP51553 393 aaPredicted RBP0.6□□□□□ -2.31
HIF1A-204ENST00000539097 PSMD7P51665 324 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF133P52736 654 aaPredicted RBP0.6□□□□□ -2.31
HIF1A-204ENST00000539097 PSPHP78330 225 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 FMODQ06828 376 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 FUT5Q11128 374 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 KRTAP13-2Q52LG2 175 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 TTC32Q5I0X7 151 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 NANOGP8Q6NSW7 305 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 MED27Q6P2C8 311 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 Q6ZRU5 148 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 LRRC28Q86X40 367 aaPredicted RBP0.6□□□□□ -2.31
HIF1A-204ENST00000539097 CALHM3Q86XJ0 350 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 OR51D1Q8NGF3 324 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 OR2D3Q8NGH3 330 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 CD200R1Q8TD46 325 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 GEMIN6Q8WXD5 167 aaKnown RBP0.6□□□□□ -2.31
HIF1A-204ENST00000539097 C11orf40Q8WZ69 217 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 CPNE2Q96FN4 548 aaPredicted RBP0.6□□□□□ -2.31
HIF1A-204ENST00000539097 CENPNQ96H22 339 aaPredicted RBP0.6□□□□□ -2.31
HIF1A-204ENST00000539097 KCNS1Q96KK3 526 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 SUCNR1Q9BXA5 334 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 NKX6-2Q9C056 277 aaPredicted RBP0.6□□□□□ -2.31
HIF1A-204ENST00000539097 C20orf27Q9GZN8 174 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms