RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 Q6ZS92 163 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 CISD2Q8N5K1 135 aaKnown RBP12.25□□□□□ -0.45
CDCA3-207ENST00000538862 ZNF525Q8N782 197 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 GMPPAQ96IJ6 420 aaPredicted RBP12.25□□□□□ -0.45
CDCA3-207ENST00000538862 OR51M1Q9H341 326 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 CDH20Q9HBT6 801 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 UFSP2Q9NUQ7 469 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 SPRR3Q9UBC9 169 aa12.25□□□□□ -0.45
CDCA3-207ENST00000538862 B4DEV8 164 aa12.24□□□□□ -0.45
CDCA3-207ENST00000538862 C3orf80F5H4A9 247 aa12.24□□□□□ -0.45
CDCA3-207ENST00000538862 CEACAM6P40199 344 aa12.24□□□□□ -0.45
CDCA3-207ENST00000538862 OR2B8PP59922 312 aa12.24□□□□□ -0.45
CDCA3-207ENST00000538862 ARG2P78540 354 aa12.24□□□□□ -0.45
CDCA3-207ENST00000538862 TGFBR3Q03167 851 aa12.24□□□□□ -0.45
CDCA3-207ENST00000538862 RBMS3Q6XE24 437 aaKnown RBP12.24□□□□□ -0.45
CDCA3-207ENST00000538862 P4HA3Q7Z4N8 544 aa12.24□□□□□ -0.45
CDCA3-207ENST00000538862 ZBTB34Q8NCN2 500 aa12.24□□□□□ -0.45
CDCA3-207ENST00000538862 TCTEX1D2Q8WW35 142 aa12.24□□□□□ -0.45
CDCA3-207ENST00000538862 OR2J1Q9GZK6 312 aa12.24□□□□□ -0.45
CDCA3-207ENST00000538862 CISD1Q9NZ45 108 aaKnown RBP12.24□□□□□ -0.45
CDCA3-207ENST00000538862 TRAV39A0A0B4J263 110 aa12.23□□□□□ -0.45
CDCA3-207ENST00000538862 TMEM210A6NLX4 147 aa12.23□□□□□ -0.45
CDCA3-207ENST00000538862 IQCF6A8MYZ5 107 aa12.23□□□□□ -0.45
CDCA3-207ENST00000538862 H0YL77 283 aa12.23□□□□□ -0.45
CDCA3-207ENST00000538862 CDIPTO14735 213 aa12.23□□□□□ -0.45
CDCA3-207ENST00000538862 PPIHO43447 177 aaKnown RBP12.23□□□□□ -0.45
CDCA3-207ENST00000538862 NXPH2O95156 264 aa12.23□□□□□ -0.45
CDCA3-207ENST00000538862 CBR1P16152 277 aa12.23□□□□□ -0.45
CDCA3-207ENST00000538862 SELEP16581 610 aa12.23□□□□□ -0.45
CDCA3-207ENST00000538862 UQCRFS1P47985 274 aa12.23□□□□□ -0.45
CDCA3-207ENST00000538862 DRAM1Q8N682 238 aa12.23□□□□□ -0.45
CDCA3-207ENST00000538862 SNRNP40Q96DI7 357 aaKnown RBP12.23□□□□□ -0.45
CDCA3-207ENST00000538862 ZDHHC11Q9H8X9 412 aa12.23□□□□□ -0.45
CDCA3-207ENST00000538862 RPRMQ9NS64 109 aa12.23□□□□□ -0.45
CDCA3-207ENST00000538862 KCNS2Q9ULS6 477 aa12.23□□□□□ -0.45
CDCA3-207ENST00000538862 METTL15P1P0C7V9 234 aa12.23□□□□□ -0.45
CDCA3-207ENST00000538862 IAPPP10997 89 aa12.23□□□□□ -0.45
CDCA3-207ENST00000538862 CEBPGP53567 150 aa12.23□□□□□ -0.45
CDCA3-207ENST00000538862 UBE2NP61088 152 aaKnown RBP12.23□□□□□ -0.45
CDCA3-207ENST00000538862 ARL16Q0P5N6 197 aa12.23□□□□□ -0.45
CDCA3-207ENST00000538862 ZNF766Q5HY98 468 aa12.23□□□□□ -0.45
CDCA3-207ENST00000538862 PRR18Q8N4B5 295 aa12.23□□□□□ -0.45
CDCA3-207ENST00000538862 PINX1Q96BK5 328 aaKnown RBP12.23□□□□□ -0.45
CDCA3-207ENST00000538862 RSG1Q9BU20 258 aa12.23□□□□□ -0.45
CDCA3-207ENST00000538862 ZGRF1Q86YA3 2104 aa12.22□□□□□ -0.45
CDCA3-207ENST00000538862 LRRK2Q5S007 2527 aa12.22□□□□□ -0.45
CDCA3-207ENST00000538862 WDR1O75083 606 aa12.22□□□□□ -0.45
CDCA3-207ENST00000538862 CELA3BP08861 270 aa12.22□□□□□ -0.45
CDCA3-207ENST00000538862 FBP1P09467 338 aa12.22□□□□□ -0.45
CDCA3-207ENST00000538862 BCL2P10415 239 aa12.22□□□□□ -0.45
CDCA3-207ENST00000538862 NQO2P16083 231 aa12.22□□□□□ -0.45
CDCA3-207ENST00000538862 ZNF16P17020 682 aaPredicted RBP12.22□□□□□ -0.45
CDCA3-207ENST00000538862 RPS10P46783 165 aaKnown RBP12.22□□□□□ -0.45
CDCA3-207ENST00000538862 GLIPR1P48060 266 aa12.22□□□□□ -0.45
CDCA3-207ENST00000538862 ELOBQ15370 118 aa12.22□□□□□ -0.45
CDCA3-207ENST00000538862 HAPLN4Q86UW8 402 aa12.22□□□□□ -0.45
CDCA3-207ENST00000538862 MYPOPQ86VE0 399 aaPredicted RBP12.22□□□□□ -0.45
CDCA3-207ENST00000538862 TMEM178AQ8NBL3 297 aa12.22□□□□□ -0.45
CDCA3-207ENST00000538862 NANPQ8TBE9 248 aa12.22□□□□□ -0.45
CDCA3-207ENST00000538862 SLC25A40Q8TBP6 338 aa12.22□□□□□ -0.45
CDCA3-207ENST00000538862 HES4Q9HCC6 221 aa12.22□□□□□ -0.45
CDCA3-207ENST00000538862 KCNIP1Q9NZI2 227 aa12.22□□□□□ -0.45
CDCA3-207ENST00000538862 OR14J1Q9UGF5 321 aa12.22□□□□□ -0.45
CDCA3-207ENST00000538862 MMP24Q9Y5R2 645 aa12.22□□□□□ -0.45
CDCA3-207ENST00000538862 TMEM30CPA0ZSE6 113 aa12.21□□□□□ -0.45
CDCA3-207ENST00000538862 ZNF727A8MUV8 499 aa12.21□□□□□ -0.45
CDCA3-207ENST00000538862 HAND1O96004 215 aa12.21□□□□□ -0.45
CDCA3-207ENST00000538862 SPCS3P61009 180 aa12.21□□□□□ -0.45
CDCA3-207ENST00000538862 PNRC1Q12796 327 aaPredicted RBP12.21□□□□□ -0.45
CDCA3-207ENST00000538862 PMS2P11Q13670 270 aa12.21□□□□□ -0.45
CDCA3-207ENST00000538862 RNFT1Q5M7Z0 435 aa12.21□□□□□ -0.45
CDCA3-207ENST00000538862 ZNF787Q6DD87 383 aa12.21□□□□□ -0.45
CDCA3-207ENST00000538862 FGFRL1Q8N441 504 aa12.21□□□□□ -0.45
CDCA3-207ENST00000538862 ZNF645Q8N7E2 425 aa12.21□□□□□ -0.45
CDCA3-207ENST00000538862 P2RX4Q99571 388 aa12.21□□□□□ -0.45
CDCA3-207ENST00000538862 WDR61Q9GZS3 305 aaKnown RBP12.21□□□□□ -0.45
CDCA3-207ENST00000538862 TOLLIPQ9H0E2 274 aa12.21□□□□□ -0.45
CDCA3-207ENST00000538862 GNG13Q9P2W3 67 aa12.21□□□□□ -0.45
CDCA3-207ENST00000538862 USP9XQ93008 2570 aaPredicted RBP12.21□□□□□ -0.45
CDCA3-207ENST00000538862 DOPEY2Q9Y3R5 2298 aa12.21□□□□□ -0.45
CDCA3-207ENST00000538862 FLNBO75369 2602 aaKnown RBP12.21□□□□□ -0.45
CDCA3-207ENST00000538862 HIVEP3Q5T1R4 2406 aa12.21□□□□□ -0.45
CDCA3-207ENST00000538862 GNLYP22749 145 aa12.21□□□□□ -0.46
CDCA3-207ENST00000538862 IGHV1-2P23083 117 aa12.21□□□□□ -0.46
CDCA3-207ENST00000538862 TNFSF10P50591 281 aa12.21□□□□□ -0.46
CDCA3-207ENST00000538862 IDH3GP51553 393 aaPredicted RBP12.21□□□□□ -0.46
CDCA3-207ENST00000538862 TMEM41BQ5BJD5 291 aa12.21□□□□□ -0.46
CDCA3-207ENST00000538862 SLC16A13Q7RTY0 426 aa12.21□□□□□ -0.46
CDCA3-207ENST00000538862 GALMQ96C23 342 aa12.21□□□□□ -0.46
CDCA3-207ENST00000538862 TMPRSS5Q9H3S3 457 aa12.21□□□□□ -0.46
CDCA3-207ENST00000538862 TMEM242Q9NWH2 141 aa12.21□□□□□ -0.46
CDCA3-207ENST00000538862 TIMM9Q9Y5J7 89 aa12.21□□□□□ -0.46
CDCA3-207ENST00000538862 PSG7Q13046 419 aa12.2□□□□□ -0.46
CDCA3-207ENST00000538862 MSMO1Q15800 293 aa12.2□□□□□ -0.46
CDCA3-207ENST00000538862 ZNF726P1Q15940 193 aa12.2□□□□□ -0.46
CDCA3-207ENST00000538862 ALKBH6Q3KRA9 238 aa12.2□□□□□ -0.46
CDCA3-207ENST00000538862 FAM90A2PQ658T7 463 aa12.2□□□□□ -0.46
CDCA3-207ENST00000538862 SLC35E4Q6ICL7 350 aa12.2□□□□□ -0.46
CDCA3-207ENST00000538862 TMEM14EPQ6UXP3 125 aa12.2□□□□□ -0.46
CDCA3-207ENST00000538862 Q8WTZ3 238 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms