RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 DEFA1P59665 94 aa19■□□□□ 0.63
TMEM260-202ENST00000538838 DEFA3P59666 94 aa19■□□□□ 0.63
TMEM260-202ENST00000538838 SSX2Q16385 188 aa19■□□□□ 0.63
TMEM260-202ENST00000538838 MZT2BQ6NZ67 158 aa19■□□□□ 0.63
TMEM260-202ENST00000538838 ZNF436-AS1Q8NC38 126 aaPredicted RBP19■□□□□ 0.63
TMEM260-202ENST00000538838 RTN4IP1Q8WWV3 396 aaPredicted RBP19■□□□□ 0.63
TMEM260-202ENST00000538838 GHITMQ9H3K2 345 aa19■□□□□ 0.63
TMEM260-202ENST00000538838 BPIFB3P59826 476 aa19■□□□□ 0.63
TMEM260-202ENST00000538838 SLC38A6Q8IZM9 456 aa19■□□□□ 0.63
TMEM260-202ENST00000538838 GPHA2Q96T91 129 aa19■□□□□ 0.63
TMEM260-202ENST00000538838 S1PR3Q99500 378 aa19■□□□□ 0.63
TMEM260-202ENST00000538838 RSRP1Q9BUV0 290 aa19■□□□□ 0.63
TMEM260-202ENST00000538838 M0R1X1 148 aa18.99■□□□□ 0.63
TMEM260-202ENST00000538838 SLC6A1P30531 599 aa18.99■□□□□ 0.63
TMEM260-202ENST00000538838 PLA1AQ53H76 456 aa18.99■□□□□ 0.63
TMEM260-202ENST00000538838 C9orf139Q6ZV77 190 aa18.99■□□□□ 0.63
TMEM260-202ENST00000538838 TGIF2LXQ8IUE1 241 aa18.99■□□□□ 0.63
TMEM260-202ENST00000538838 DRAXINQ8NBI3 349 aaPredicted RBP18.99■□□□□ 0.63
TMEM260-202ENST00000538838 MALSU1Q96EH3 234 aa18.99■□□□□ 0.63
TMEM260-202ENST00000538838 MRPL20Q9BYC9 149 aaKnown RBP18.99■□□□□ 0.63
TMEM260-202ENST00000538838 VSIG4Q9Y279 399 aa18.99■□□□□ 0.63
TMEM260-202ENST00000538838 NAV3Q8IVL0 2385 aa18.98■□□□□ 0.63
TMEM260-202ENST00000538838 MDFIC2A0A1B0GVS7 189 aa18.98■□□□□ 0.63
TMEM260-202ENST00000538838 TNFSF12O43508 249 aa18.98■□□□□ 0.63
TMEM260-202ENST00000538838 SLC22A5O76082 557 aa18.98■□□□□ 0.63
TMEM260-202ENST00000538838 ECI1P42126 302 aa18.98■□□□□ 0.63
TMEM260-202ENST00000538838 LINC00205P59089 165 aa18.98■□□□□ 0.63
TMEM260-202ENST00000538838 ZNF816Q0VGE8 651 aaPredicted RBP18.98■□□□□ 0.63
TMEM260-202ENST00000538838 RBMS2Q15434 407 aaKnown RBP18.98■□□□□ 0.63
TMEM260-202ENST00000538838 PHLDA2Q53GA4 152 aa18.98■□□□□ 0.63
TMEM260-202ENST00000538838 FAM71F2Q6NXP2 309 aa18.98■□□□□ 0.63
TMEM260-202ENST00000538838 LPCAT3Q6P1A2 487 aa18.98■□□□□ 0.63
TMEM260-202ENST00000538838 BEX2Q9BXY8 128 aa18.98■□□□□ 0.63
TMEM260-202ENST00000538838 CDC42EP3Q9UKI2 254 aa18.98■□□□□ 0.63
TMEM260-202ENST00000538838 GAB2Q9UQC2 676 aa18.98■□□□□ 0.63
TMEM260-202ENST00000538838 A0A1W2PPI3 338 aa18.97■□□□□ 0.63
TMEM260-202ENST00000538838 GPR31O00270 319 aa18.97■□□□□ 0.63
TMEM260-202ENST00000538838 NDUFB6O95139 128 aa18.97■□□□□ 0.63
TMEM260-202ENST00000538838 SURF2Q15527 256 aaPredicted RBP18.97■□□□□ 0.63
TMEM260-202ENST00000538838 SLC25A21Q9BQT8 299 aaPredicted RBP18.97■□□□□ 0.63
TMEM260-202ENST00000538838 FAM96BQ9Y3D0 163 aa18.97■□□□□ 0.63
TMEM260-202ENST00000538838 MTORP42345 2549 aa18.97■□□□□ 0.63
TMEM260-202ENST00000538838 FAM240BA0A1B0GVZ2 78 aa18.96■□□□□ 0.63
TMEM260-202ENST00000538838 GAPDHP04406 335 aaKnown RBP18.96■□□□□ 0.63
TMEM260-202ENST00000538838 MSMO1Q15800 293 aa18.96■□□□□ 0.63
TMEM260-202ENST00000538838 DEFB112Q30KQ8 113 aa18.96■□□□□ 0.63
TMEM260-202ENST00000538838 BVESQ8NE79 360 aa18.96■□□□□ 0.63
TMEM260-202ENST00000538838 AKR1E2Q96JD6 320 aa18.96■□□□□ 0.63
TMEM260-202ENST00000538838 DPAGT1Q9H3H5 408 aa18.96■□□□□ 0.63
TMEM260-202ENST00000538838 C5orf66Q9H5L9 145 aa18.96■□□□□ 0.63
TMEM260-202ENST00000538838 GPR132Q9UNW8 380 aa18.96■□□□□ 0.63
TMEM260-202ENST00000538838 IGHV1-3A0A0C4DH29 117 aa18.96■□□□□ 0.63
TMEM260-202ENST00000538838 FBP1P09467 338 aa18.96■□□□□ 0.63
TMEM260-202ENST00000538838 EIF4EBP1Q13541 118 aaPredicted RBP18.96■□□□□ 0.63
TMEM260-202ENST00000538838 GLDNQ6ZMI3 551 aaPredicted RBP18.96■□□□□ 0.63
TMEM260-202ENST00000538838 NRARPQ7Z6K4 114 aa18.96■□□□□ 0.63
TMEM260-202ENST00000538838 ENKURQ8TC29 256 aa18.96■□□□□ 0.63
TMEM260-202ENST00000538838 ZFAND1Q8TCF1 268 aa18.96■□□□□ 0.63
TMEM260-202ENST00000538838 NABP2Q9BQ15 211 aa18.96■□□□□ 0.63
TMEM260-202ENST00000538838 SLC2A9Q9NRM0 540 aa18.96■□□□□ 0.63
TMEM260-202ENST00000538838 C14orf166Q9Y224 244 aaKnown RBP18.96■□□□□ 0.63
TMEM260-202ENST00000538838 OOSP1A8MZH6 123 aa18.95■□□□□ 0.62
TMEM260-202ENST00000538838 TXNL1O43396 289 aa18.95■□□□□ 0.62
TMEM260-202ENST00000538838 CTSDP07339 412 aaPredicted RBP18.95■□□□□ 0.62
TMEM260-202ENST00000538838 CT45A6P0DMU7 189 aa18.95■□□□□ 0.62
TMEM260-202ENST00000538838 CT45A5P0DMU8 189 aa18.95■□□□□ 0.62
TMEM260-202ENST00000538838 CT45A7P0DMV0 189 aa18.95■□□□□ 0.62
TMEM260-202ENST00000538838 ABCA11PQ4W5N1 156 aa18.95■□□□□ 0.62
TMEM260-202ENST00000538838 CMTM1Q8IZ96 169 aa18.95■□□□□ 0.62
TMEM260-202ENST00000538838 ZDHHC22Q8N966 263 aa18.95■□□□□ 0.62
TMEM260-202ENST00000538838 ZBTB34Q8NCN2 500 aa18.95■□□□□ 0.62
TMEM260-202ENST00000538838 RBMXL1Q96E39 390 aaKnown RBP18.95■□□□□ 0.62
TMEM260-202ENST00000538838 ZNF486Q96H40 463 aaPredicted RBP18.95■□□□□ 0.62
TMEM260-202ENST00000538838 RTBDNQ9BSG5 229 aaPredicted RBP18.95■□□□□ 0.62
TMEM260-202ENST00000538838 OCEL1Q9H607 264 aa18.95■□□□□ 0.62
TMEM260-202ENST00000538838 FLVCR2Q9UPI3 526 aa18.95■□□□□ 0.62
TMEM260-202ENST00000538838 LINC00473A8K010 186 aa18.94■□□□□ 0.62
TMEM260-202ENST00000538838 TIMM23O14925 209 aa18.94■□□□□ 0.62
TMEM260-202ENST00000538838 RLN1P04808 185 aa18.94■□□□□ 0.62
TMEM260-202ENST00000538838 SRD5A1P18405 259 aa18.94■□□□□ 0.62
TMEM260-202ENST00000538838 DUTP33316 252 aaKnown RBP18.94■□□□□ 0.62
TMEM260-202ENST00000538838 CCDC144NLQ6NUI1 221 aa18.94■□□□□ 0.62
TMEM260-202ENST00000538838 TMED4Q7Z7H5 227 aa18.94■□□□□ 0.62
TMEM260-202ENST00000538838 MOB3BQ86TA1 216 aa18.94■□□□□ 0.62
TMEM260-202ENST00000538838 OR8H3Q8N146 312 aa18.94■□□□□ 0.62
TMEM260-202ENST00000538838 ZFHX3Q15911 3703 aa18.94■□□□□ 0.62
TMEM260-202ENST00000538838 IGHV3-72A0A0B4J1Y9 119 aa18.93■□□□□ 0.62
TMEM260-202ENST00000538838 TCRBP04435 133 aa18.93■□□□□ 0.62
TMEM260-202ENST00000538838 PIGPP57054 158 aa18.93■□□□□ 0.62
TMEM260-202ENST00000538838 RPL30P62888 115 aaKnown RBP18.93■□□□□ 0.62
TMEM260-202ENST00000538838 KCTD9Q7L273 389 aa18.93■□□□□ 0.62
TMEM260-202ENST00000538838 ZNF383Q8NA42 475 aa18.93■□□□□ 0.62
TMEM260-202ENST00000538838 ADAD2Q8NCV1 583 aaKnown RBP18.93■□□□□ 0.62
TMEM260-202ENST00000538838 ZNF48Q96MX3 618 aaPredicted RBP18.93■□□□□ 0.62
TMEM260-202ENST00000538838 SCGB3A2Q96PL1 93 aa18.93■□□□□ 0.62
TMEM260-202ENST00000538838 HSD17B10Q99714 261 aaKnown RBP18.93■□□□□ 0.62
TMEM260-202ENST00000538838 C20orf85Q9H1P6 137 aa18.93■□□□□ 0.62
TMEM260-202ENST00000538838 ARPC1BO15143 372 aaKnown RBP18.92■□□□□ 0.62
TMEM260-202ENST00000538838 PGLYRP1O75594 196 aaPredicted RBP18.92■□□□□ 0.62
TMEM260-202ENST00000538838 OR51H1Q8NH63 302 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms