RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 PRTN3P24158 256 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 GZMKP49863 264 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 PRRX1P54821 245 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 RAG2P55895 527 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 LY6G6FQ5SQ64 297 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 NCR3LG1Q68D85 454 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 TBC1D26Q86UD7 250 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 SGPP2Q8IWX5 399 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 OR51H1Q8NH63 302 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 FAM216AQ8WUB2 273 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 RTN4IP1Q8WWV3 396 aaPredicted RBP11.53□□□□□ -0.56
CD4-208ENST00000538827 LHX4Q969G2 390 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 TMEM186Q96B77 213 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 C1orf159Q96HA4 380 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 AKR1E2Q96JD6 320 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 DMRTB1Q96MA1 342 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 TBX15Q96SF7 602 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 NAA60Q9H7X0 242 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 HEXA-AS1Q9H8Q6 139 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 HIF1ANQ9NWT6 349 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 SDHAF2Q9NX18 166 aa11.53□□□□□ -0.56
CD4-208ENST00000538827 AMMECR1Q9Y4X0 333 aaPredicted RBP11.53□□□□□ -0.56
CD4-208ENST00000538827 CRYM-AS1A6NIL9 109 aa11.52□□□□□ -0.57
CD4-208ENST00000538827 RAB29O14966 203 aa11.52□□□□□ -0.57
CD4-208ENST00000538827 SLC22A5O76082 557 aa11.52□□□□□ -0.57
CD4-208ENST00000538827 MMP9P14780 707 aa11.52□□□□□ -0.57
CD4-208ENST00000538827 CD34P28906 385 aa11.52□□□□□ -0.57
CD4-208ENST00000538827 RND3P61587 244 aa11.52□□□□□ -0.57
CD4-208ENST00000538827 CATR1Q13166 79 aa11.52□□□□□ -0.57
CD4-208ENST00000538827 OR2B11Q5JQS5 317 aa11.52□□□□□ -0.57
CD4-208ENST00000538827 C11orf88Q6PI97 169 aa11.52□□□□□ -0.57
CD4-208ENST00000538827 GLDNQ6ZMI3 551 aaPredicted RBP11.52□□□□□ -0.57
CD4-208ENST00000538827 LYG2Q86SG7 212 aa11.52□□□□□ -0.57
CD4-208ENST00000538827 BVESQ8NE79 360 aa11.52□□□□□ -0.57
CD4-208ENST00000538827 ZNF596Q8TC21 504 aa11.52□□□□□ -0.57
CD4-208ENST00000538827 TCTEX1D2Q8WW35 142 aa11.52□□□□□ -0.57
CD4-208ENST00000538827 MSI2Q96DH6 328 aaKnown RBP11.52□□□□□ -0.57
CD4-208ENST00000538827 PIPOXQ9P0Z9 390 aa11.52□□□□□ -0.57
CD4-208ENST00000538827 HIVEP2P31629 2446 aa11.52□□□□□ -0.57
CD4-208ENST00000538827 MXRA5Q9NR99 2828 aa11.51□□□□□ -0.57
CD4-208ENST00000538827 A0A0A6YYJ9 748 aa11.51□□□□□ -0.57
CD4-208ENST00000538827 TRAV40A0A0B4J280 105 aa11.51□□□□□ -0.57
CD4-208ENST00000538827 RNF212BA8MTL3 300 aa11.51□□□□□ -0.57
CD4-208ENST00000538827 RNASEK-C17orf49H0YIS7 233 aa11.51□□□□□ -0.57
CD4-208ENST00000538827 SSNA1O43805 119 aa11.51□□□□□ -0.57
CD4-208ENST00000538827 CREBL2O60519 120 aaPredicted RBP11.51□□□□□ -0.57
CD4-208ENST00000538827 PGLYRP1O75594 196 aaPredicted RBP11.51□□□□□ -0.57
CD4-208ENST00000538827 SFT2D2O95562 160 aa11.51□□□□□ -0.57
CD4-208ENST00000538827 TGFAP01135 160 aa11.51□□□□□ -0.57
CD4-208ENST00000538827 IL5P05113 134 aa11.51□□□□□ -0.57
CD4-208ENST00000538827 REG1BP48304 166 aa11.51□□□□□ -0.57
CD4-208ENST00000538827 MECP2P51608 486 aaKnown RBP11.51□□□□□ -0.57
CD4-208ENST00000538827 UBE2MP61081 183 aaKnown RBP11.51□□□□□ -0.57
CD4-208ENST00000538827 HLA-DRB5Q30154 266 aa11.51□□□□□ -0.57
CD4-208ENST00000538827 TMEM128Q5BJH2 165 aa11.51□□□□□ -0.57
CD4-208ENST00000538827 FAHD2BQ6P2I3 314 aaPredicted RBP11.51□□□□□ -0.57
CD4-208ENST00000538827 C1orf122Q6ZSJ8 110 aa11.51□□□□□ -0.57
CD4-208ENST00000538827 KCTD9Q7L273 389 aa11.51□□□□□ -0.57
CD4-208ENST00000538827 CIARTQ8N365 385 aaPredicted RBP11.51□□□□□ -0.57
CD4-208ENST00000538827 LINC00311Q8N616 119 aa11.51□□□□□ -0.57
CD4-208ENST00000538827 C8orf31Q8N9H6 132 aa11.51□□□□□ -0.57
CD4-208ENST00000538827 UXS1Q8NBZ7 420 aa11.51□□□□□ -0.57
CD4-208ENST00000538827 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.51□□□□□ -0.57
CD4-208ENST00000538827 ZBTB34Q8NCN2 500 aa11.51□□□□□ -0.57
CD4-208ENST00000538827 FAHD2AQ96GK7 314 aa11.51□□□□□ -0.57
CD4-208ENST00000538827 S1PR3Q99500 378 aa11.51□□□□□ -0.57
CD4-208ENST00000538827 AGMATQ9BSE5 352 aa11.51□□□□□ -0.57
CD4-208ENST00000538827 C7orf69Q9H7B7 122 aa11.51□□□□□ -0.57
CD4-208ENST00000538827 LIN7CQ9NUP9 197 aaKnown RBP11.51□□□□□ -0.57
CD4-208ENST00000538827 PRR13Q9NZ81 148 aa11.51□□□□□ -0.57
CD4-208ENST00000538827 AUP1Q9Y679 476 aa11.51□□□□□ -0.57
CD4-208ENST00000538827 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.51□□□□□ -0.57
CD4-208ENST00000538827 IGHV3OR16-10A0A075B7F0 116 aa11.5□□□□□ -0.57
CD4-208ENST00000538827 C9orf170A2RU37 121 aa11.5□□□□□ -0.57
CD4-208ENST00000538827 MPPED1O15442 326 aa11.5□□□□□ -0.57
CD4-208ENST00000538827 IFNA2P01563 188 aa11.5□□□□□ -0.57
CD4-208ENST00000538827 IGLV2-14P01704 120 aa11.5□□□□□ -0.57
CD4-208ENST00000538827 OR5AC1P0C628 307 aa11.5□□□□□ -0.57
CD4-208ENST00000538827 ANXA3P12429 323 aa11.5□□□□□ -0.57
CD4-208ENST00000538827 PAX8Q06710 450 aa11.5□□□□□ -0.57
CD4-208ENST00000538827 DHRS2Q13268 280 aa11.5□□□□□ -0.57
CD4-208ENST00000538827 MSMO1Q15800 293 aa11.5□□□□□ -0.57
CD4-208ENST00000538827 SP6Q3SY56 376 aa11.5□□□□□ -0.57
CD4-208ENST00000538827 ZNF626Q68DY1 528 aa11.5□□□□□ -0.57
CD4-208ENST00000538827 CYB5R2Q6BCY4 276 aa11.5□□□□□ -0.57
CD4-208ENST00000538827 HCP5Q6MZN7 132 aa11.5□□□□□ -0.57
CD4-208ENST00000538827 LIN54Q6MZP7 749 aa11.5□□□□□ -0.57
CD4-208ENST00000538827 ODF3L1Q8IXM7 274 aa11.5□□□□□ -0.57
CD4-208ENST00000538827 DRAXINQ8NBI3 349 aaPredicted RBP11.5□□□□□ -0.57
CD4-208ENST00000538827 BEND2Q8NDZ0 799 aa11.5□□□□□ -0.57
CD4-208ENST00000538827 ZNF431Q8TF32 576 aaPredicted RBP11.5□□□□□ -0.57
CD4-208ENST00000538827 TNFRSF14Q92956 283 aa11.5□□□□□ -0.57
CD4-208ENST00000538827 ALX4Q9H161 411 aaPredicted RBP11.5□□□□□ -0.57
CD4-208ENST00000538827 OR51J1Q9H342 316 aa11.5□□□□□ -0.57
CD4-208ENST00000538827 C3orf85A0A1B0GTC6 90 aa11.49□□□□□ -0.57
CD4-208ENST00000538827 C7orf66A4D0T2 115 aa11.49□□□□□ -0.57
CD4-208ENST00000538827 LY6G6DO95868 133 aa11.49□□□□□ -0.57
CD4-208ENST00000538827 GATA3P23771 443 aa11.49□□□□□ -0.57
CD4-208ENST00000538827 LGALS4P56470 323 aa11.49□□□□□ -0.57
CD4-208ENST00000538827 SUPT4H1P63272 117 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms