RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 PSMF1Q92530 271 aa15.73■□□□□ 0.11
SFSWAP-207ENST00000538548 PRDM14Q9GZV8 571 aa15.73■□□□□ 0.11
SFSWAP-207ENST00000538548 ZDHHC11Q9H8X9 412 aa15.73■□□□□ 0.11
SFSWAP-207ENST00000538548 TP53TG3Q9ULZ0 132 aa15.73■□□□□ 0.11
SFSWAP-207ENST00000538548 TCF23Q7RTU1 214 aa15.72■□□□□ 0.11
SFSWAP-207ENST00000538548 MKXQ8IYA7 352 aa15.72■□□□□ 0.11
SFSWAP-207ENST00000538548 SFRP2Q96HF1 295 aa15.72■□□□□ 0.11
SFSWAP-207ENST00000538548 PPP1R3CQ9UQK1 317 aa15.72■□□□□ 0.11
SFSWAP-207ENST00000538548 DOCK11Q5JSL3 2073 aa15.72■□□□□ 0.11
SFSWAP-207ENST00000538548 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.72■□□□□ 0.11
SFSWAP-207ENST00000538548 SIAH2O43255 324 aa15.72■□□□□ 0.11
SFSWAP-207ENST00000538548 C1QTNF9P0C862 333 aa15.72■□□□□ 0.11
SFSWAP-207ENST00000538548 LIFP15018 202 aa15.72■□□□□ 0.11
SFSWAP-207ENST00000538548 GNB1P62873 340 aa15.72■□□□□ 0.11
SFSWAP-207ENST00000538548 RAC1P63000 192 aa15.72■□□□□ 0.11
SFSWAP-207ENST00000538548 WDR74Q6RFH5 385 aaPredicted RBP15.72■□□□□ 0.11
SFSWAP-207ENST00000538548 LINC00596Q86U02 117 aa15.72■□□□□ 0.11
SFSWAP-207ENST00000538548 IL1F10Q8WWZ1 152 aa15.72■□□□□ 0.11
SFSWAP-207ENST00000538548 OR5P3Q8WZ94 311 aa15.72■□□□□ 0.11
SFSWAP-207ENST00000538548 HSPB9Q9BQS6 159 aa15.72■□□□□ 0.11
SFSWAP-207ENST00000538548 PATZ1Q9HBE1 687 aaKnown RBP15.72■□□□□ 0.11
SFSWAP-207ENST00000538548 ASCL3Q9NQ33 180 aa15.72■□□□□ 0.11
SFSWAP-207ENST00000538548 AURKAIP1Q9NWT8 199 aaPredicted RBP15.72■□□□□ 0.11
SFSWAP-207ENST00000538548 OR1A1Q9P1Q5 309 aa15.72■□□□□ 0.11
SFSWAP-207ENST00000538548 BDP1A6H8Y1 2624 aa15.71■□□□□ 0.11
SFSWAP-207ENST00000538548 TIAF1O95411 115 aa15.71■□□□□ 0.11
SFSWAP-207ENST00000538548 SERPINA7P05543 415 aa15.71■□□□□ 0.11
SFSWAP-207ENST00000538548 ZNF16P17020 682 aaPredicted RBP15.71■□□□□ 0.11
SFSWAP-207ENST00000538548 LINC00310P59036 64 aa15.71■□□□□ 0.11
SFSWAP-207ENST00000538548 NPCDR1Q9BY65 106 aa15.71■□□□□ 0.11
SFSWAP-207ENST00000538548 C19orf25Q9UFG5 118 aaPredicted RBP15.71■□□□□ 0.11
SFSWAP-207ENST00000538548 A0A1W2PR80 420 aa15.71■□□□□ 0.11
SFSWAP-207ENST00000538548 GLB1P16278 677 aa15.71■□□□□ 0.11
SFSWAP-207ENST00000538548 CDKN1AP38936 164 aa15.71■□□□□ 0.11
SFSWAP-207ENST00000538548 CEACAM21Q3KPI0 293 aa15.71■□□□□ 0.11
SFSWAP-207ENST00000538548 MYPOPQ86VE0 399 aaPredicted RBP15.71■□□□□ 0.11
SFSWAP-207ENST00000538548 AGBL5Q8NDL9 886 aa15.71■□□□□ 0.11
SFSWAP-207ENST00000538548 VN1R17PQ8TDU5 208 aa15.71■□□□□ 0.11
SFSWAP-207ENST00000538548 IGHV1OR15-9A0A0B4J2B8 117 aa15.7■□□□□ 0.1
SFSWAP-207ENST00000538548 DNPH1O43598 174 aa15.7■□□□□ 0.1
SFSWAP-207ENST00000538548 KRASP01116 189 aa15.7■□□□□ 0.1
SFSWAP-207ENST00000538548 CEACAM16Q2WEN9 425 aa15.7■□□□□ 0.1
SFSWAP-207ENST00000538548 FBXW9Q5XUX1 488 aa15.7■□□□□ 0.1
SFSWAP-207ENST00000538548 FGFRL1Q8N441 504 aa15.7■□□□□ 0.1
SFSWAP-207ENST00000538548 ZNF709Q8N972 641 aa15.7■□□□□ 0.1
SFSWAP-207ENST00000538548 OR5AU1Q8NGC0 362 aa15.7■□□□□ 0.1
SFSWAP-207ENST00000538548 HSPB7Q9UBY9 170 aa15.7■□□□□ 0.1
SFSWAP-207ENST00000538548 YLPM1P49750 1951 aaKnown RBP15.7■□□□□ 0.1
SFSWAP-207ENST00000538548 CBR3O75828 277 aa15.7■□□□□ 0.1
SFSWAP-207ENST00000538548 NDUFB4O95168 129 aa15.7■□□□□ 0.1
SFSWAP-207ENST00000538548 CDC34P49427 236 aaPredicted RBP15.7■□□□□ 0.1
SFSWAP-207ENST00000538548 RAC3P60763 192 aa15.7■□□□□ 0.1
SFSWAP-207ENST00000538548 MSMO1Q15800 293 aa15.7■□□□□ 0.1
SFSWAP-207ENST00000538548 COLCA1Q6ZS62 124 aa15.7■□□□□ 0.1
SFSWAP-207ENST00000538548 AAED1Q7RTV5 226 aa15.7■□□□□ 0.1
SFSWAP-207ENST00000538548 CDX2Q99626 313 aaPredicted RBP15.7■□□□□ 0.1
SFSWAP-207ENST00000538548 KCNIP2Q9NS61 270 aa15.7■□□□□ 0.1
SFSWAP-207ENST00000538548 MDFIC2A0A1B0GVS7 189 aa15.69■□□□□ 0.1
SFSWAP-207ENST00000538548 GJE1A6NN92 205 aa15.69■□□□□ 0.1
SFSWAP-207ENST00000538548 SERF1AO75920 110 aa15.69■□□□□ 0.1
SFSWAP-207ENST00000538548 CRYAAP02489 173 aa15.69■□□□□ 0.1
SFSWAP-207ENST00000538548 SRFP11831 508 aa15.69■□□□□ 0.1
SFSWAP-207ENST00000538548 EGR1P18146 543 aa15.69■□□□□ 0.1
SFSWAP-207ENST00000538548 LHX2P50458 406 aa15.69■□□□□ 0.1
SFSWAP-207ENST00000538548 RAB7AP51149 207 aa15.69■□□□□ 0.1
SFSWAP-207ENST00000538548 TFF3Q07654 80 aa15.69■□□□□ 0.1
SFSWAP-207ENST00000538548 RDH5Q92781 318 aa15.69■□□□□ 0.1
SFSWAP-207ENST00000538548 DERL1Q9BUN8 251 aa15.69■□□□□ 0.1
SFSWAP-207ENST00000538548 CHODLQ9H9P2 273 aa15.69■□□□□ 0.1
SFSWAP-207ENST00000538548 DNAJC4Q9NNZ3 241 aa15.69■□□□□ 0.1
SFSWAP-207ENST00000538548 TRAV24A0A0B4J272 114 aa15.69■□□□□ 0.1
SFSWAP-207ENST00000538548 F6UZH7 168 aa15.69■□□□□ 0.1
SFSWAP-207ENST00000538548 RBFOX2O43251 390 aaKnown RBP eCLIP15.69■□□□□ 0.1
SFSWAP-207ENST00000538548 MYF5P13349 255 aa15.69■□□□□ 0.1
SFSWAP-207ENST00000538548 CRISP2P16562 243 aa15.69■□□□□ 0.1
SFSWAP-207ENST00000538548 ZNF114Q8NC26 417 aa15.69■□□□□ 0.1
SFSWAP-207ENST00000538548 OR10P1Q8NGE3 313 aa15.69■□□□□ 0.1
SFSWAP-207ENST00000538548 KCNS2Q9ULS6 477 aa15.69■□□□□ 0.1
SFSWAP-207ENST00000538548 RBM7Q9Y580 266 aaKnown RBP15.69■□□□□ 0.1
SFSWAP-207ENST00000538548 PMS2P5A8MQ11 134 aa15.68■□□□□ 0.1
SFSWAP-207ENST00000538548 TCF21O43680 179 aa15.68■□□□□ 0.1
SFSWAP-207ENST00000538548 SCRG1O75711 98 aa15.68■□□□□ 0.1
SFSWAP-207ENST00000538548 RIPPLY2Q5TAB7 128 aa15.68■□□□□ 0.1
SFSWAP-207ENST00000538548 C11orf42Q8N5U0 333 aa15.68■□□□□ 0.1
SFSWAP-207ENST00000538548 TSTD1Q8NFU3 115 aa15.68■□□□□ 0.1
SFSWAP-207ENST00000538548 OR4B1Q8NGF8 309 aa15.68■□□□□ 0.1
SFSWAP-207ENST00000538548 SLC35E1Q96K37 410 aa15.68■□□□□ 0.1
SFSWAP-207ENST00000538548 CRIM1Q9NZV1 1036 aa15.68■□□□□ 0.1
SFSWAP-207ENST00000538548 FREM2Q5SZK8 3169 aa15.68■□□□□ 0.1
SFSWAP-207ENST00000538548 CCL3P10147 92 aa15.68■□□□□ 0.1
SFSWAP-207ENST00000538548 KITLGP21583 273 aa15.68■□□□□ 0.1
SFSWAP-207ENST00000538548 TFPI2P48307 235 aa15.68■□□□□ 0.1
SFSWAP-207ENST00000538548 COMPP49747 757 aaPredicted RBP15.68■□□□□ 0.1
SFSWAP-207ENST00000538548 TMEM249Q2WGJ8 235 aa15.68■□□□□ 0.1
SFSWAP-207ENST00000538548 CPEB3Q8NE35 698 aaKnown RBP15.68■□□□□ 0.1
SFSWAP-207ENST00000538548 MSL2Q9HCI7 577 aa15.68■□□□□ 0.1
SFSWAP-207ENST00000538548 WIPI2Q9Y4P8 454 aa15.68■□□□□ 0.1
SFSWAP-207ENST00000538548 ZNF716A6NP11 495 aa15.67■□□□□ 0.1
SFSWAP-207ENST00000538548 C17orf112F2Z3M2 114 aa15.67■□□□□ 0.1
SFSWAP-207ENST00000538548 SYNGR1O43759 233 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms