RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 GLDNQ6ZMI3 551 aaPredicted RBP8.72□□□□□ -1.01
TNFRSF1A-211ENST00000538363 LYG2Q86SG7 212 aa8.72□□□□□ -1.01
TNFRSF1A-211ENST00000538363 ZNF695Q8IW36 515 aa8.72□□□□□ -1.01
TNFRSF1A-211ENST00000538363 DRAM1Q8N682 238 aa8.72□□□□□ -1.01
TNFRSF1A-211ENST00000538363 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.72□□□□□ -1.01
TNFRSF1A-211ENST00000538363 ZNF431Q8TF32 576 aaPredicted RBP8.72□□□□□ -1.01
TNFRSF1A-211ENST00000538363 CAPSLQ8WWF8 208 aa8.72□□□□□ -1.01
TNFRSF1A-211ENST00000538363 TNFRSF14Q92956 283 aa8.72□□□□□ -1.01
TNFRSF1A-211ENST00000538363 ADTRPQ96IZ2 230 aa8.72□□□□□ -1.01
TNFRSF1A-211ENST00000538363 RTBDNQ9BSG5 229 aaPredicted RBP8.72□□□□□ -1.01
TNFRSF1A-211ENST00000538363 TOLLIPQ9H0E2 274 aa8.72□□□□□ -1.01
TNFRSF1A-211ENST00000538363 ALX4Q9H161 411 aaPredicted RBP8.72□□□□□ -1.01
TNFRSF1A-211ENST00000538363 OR51J1Q9H342 316 aa8.72□□□□□ -1.01
TNFRSF1A-211ENST00000538363 C5orf66Q9H5L9 145 aa8.72□□□□□ -1.01
TNFRSF1A-211ENST00000538363 NAA60Q9H7X0 242 aa8.72□□□□□ -1.01
TNFRSF1A-211ENST00000538363 LIN7CQ9NUP9 197 aaKnown RBP8.72□□□□□ -1.01
TNFRSF1A-211ENST00000538363 ALG5Q9Y673 324 aa8.72□□□□□ -1.01
TNFRSF1A-211ENST00000538363 ITPR2Q14571 2701 aa8.72□□□□□ -1.01
TNFRSF1A-211ENST00000538363 MALRD1Q5VYJ5 2156 aa8.71□□□□□ -1.01
TNFRSF1A-211ENST00000538363 J3QLI3 93 aa8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 SLC31A2O15432 143 aa8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 SFT2D2O95562 160 aa8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 IFNA21P01568 189 aa8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 APOA2P02652 100 aa8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 GAPDHP04406 335 aaKnown RBP8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 THBS3P49746 956 aa8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 ZNF134P52741 427 aa8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 DLX1P56177 255 aa8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 SRPXP78539 464 aa8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 KLRD1Q13241 179 aa8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 PPP1R1AQ13522 171 aa8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 SP6Q3SY56 376 aa8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 RPL39P5Q59GN2 51 aa8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 OR2B11Q5JQS5 317 aa8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 ZNF66Q6ZN08 573 aa8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 SLC25A48Q6ZT89 311 aaKnown RBP8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 MOB3BQ86TA1 216 aa8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 TGIF2LXQ8IUE1 241 aa8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 LGI3Q8N145 548 aa8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 C12orf45Q8N5I9 185 aaPredicted RBP8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 C8orf31Q8N9H6 132 aa8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 BVESQ8NE79 360 aa8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 SIRPDQ9H106 197 aa8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 SDHAF2Q9NX18 166 aa8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 POLR3KQ9Y2Y1 108 aaPredicted RBP8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 FAM96BQ9Y3D0 163 aa8.71□□□□□ -1.02
TNFRSF1A-211ENST00000538363 MYO9AB2RTY4 2548 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 A0A087X0M5 115 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 SAA2-SAA4A0A096LPE2 208 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 A0A0A6YYJ9 748 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 A0A1B0GX30 115 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 C9orf170A2RU37 121 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 CRYM-AS1A6NIL9 109 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 SNRPGP15A8MWD9 76 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 FAM25EA8MYX2 175 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 PFDN1O60925 122 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 B3GALNT1O75752 331 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 OR5AC1P0C628 307 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 SAA2P0DJI9 122 aaPredicted RBP8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 IGHV4-31P0DP07 118 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 VSIG10L2P0DP72 767 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 KIR2DS2P43631 304 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 REG1BP48304 166 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 RND3P61587 244 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 PAX8Q06710 450 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 MSMO1Q15800 293 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 RTL8BQ17RB0 113 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 HLA-DRB5Q30154 266 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 SPAG16Q8N0X2 631 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 LINC00311Q8N616 119 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 TEX29Q8N6K0 151 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 Q8N7P7 452 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 DRAXINQ8NBI3 349 aaPredicted RBP8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 BEND2Q8NDZ0 799 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 OR52B4Q8NGK2 314 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 MRGPRFQ96AM1 343 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 MSI2Q96DH6 328 aaKnown RBP8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 PDCD10Q9BUL8 212 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 DPM3Q9P2X0 92 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 HILPDAQ9Y5L2 63 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 CCDC168Q8NDH2 2452 aa8.7□□□□□ -1.02
TNFRSF1A-211ENST00000538363 ARHGAP32A7KAX9 2087 aa8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 PRRC2AP48634 2157 aaKnown RBP8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 IGHV3OR16-10A0A075B7F0 116 aa8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 C13orf42A0A1B0GVH6 325 aa8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 C5orf51A6NDU8 294 aa8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 BUB1B-PAK6H3BSN5 160 aa8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 TXNL1O43396 289 aa8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 FCGR3BO75015 233 aa8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 RRASP10301 218 aa8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 HOXB4P17483 251 aaPredicted RBP8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 F2RP25116 425 aa8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 LPAR6P43657 344 aa8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 UBE2E1P51965 193 aa8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 ERVK-16P61578 105 aa8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 DHRS2Q13268 280 aa8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 CCDC144NLQ6NUI1 221 aa8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 C11orf42Q8N5U0 333 aa8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 TCTEX1D1Q8N7M0 179 aa8.69□□□□□ -1.02
TNFRSF1A-211ENST00000538363 ZNF439Q8NDP4 499 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms