RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 CITED2Q99967 270 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-210ENST00000538120 SYT3Q9BQG1 590 aa9.03□□□□□ -0.96
CLIP1-210ENST00000538120 CABLES2Q9BTV7 478 aa9.03□□□□□ -0.96
CLIP1-210ENST00000538120 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-210ENST00000538120 A8MXE2 369 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 H7C1Q1 480 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 K7N7A8 449 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 M0R1B8 84 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 PHF1O43189 567 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-210ENST00000538120 WIPF1O43516 503 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 GCH1P30793 250 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 MDH2P40926 338 aaKnown RBP9.02□□□□□ -0.97
CLIP1-210ENST00000538120 RND3P61587 244 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 C9orf152Q5JTZ5 239 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 SOHLH1Q5JUK2 328 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 WDR82Q6UXN9 313 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 HEPN1Q6WQI6 88 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 ZNF818PQ6ZRF7 136 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 SLC35G3Q8N808 338 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 FAM122AQ96E09 287 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 MALSU1Q96EH3 234 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 TCEAL7Q9BRU2 100 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 ANKRD11Q6UB99 2663 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-210ENST00000538120 DMXL2Q8TDJ6 3036 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 SH2D1BO14796 132 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 ST8SIA3O43173 380 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 HAND1O96004 215 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 EWSR1Q01844 656 aaKnown RBP eCLIP9.02□□□□□ -0.97
CLIP1-210ENST00000538120 FAM27E3Q08E93 113 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 SPIN3Q5JUX0 258 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 C1orf174Q8IYL3 243 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 H1FOOQ8IZA3 346 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-210ENST00000538120 CCDC71LQ8N9Z2 235 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 PRDM13Q9H4Q3 707 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 CCL28Q9NRJ3 127 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 URGCP-MRPS24S4R325 110 aa9.02□□□□□ -0.97
CLIP1-210ENST00000538120 SVILO95425 2214 aa9.01□□□□□ -0.97
CLIP1-210ENST00000538120 C3orf85A0A1B0GTC6 90 aa9.01□□□□□ -0.97
CLIP1-210ENST00000538120 PSPNO60542 156 aa9.01□□□□□ -0.97
CLIP1-210ENST00000538120 CXCL1P09341 107 aa9.01□□□□□ -0.97
CLIP1-210ENST00000538120 PRRX1P54821 245 aa9.01□□□□□ -0.97
CLIP1-210ENST00000538120 NKX6-1P78426 367 aaPredicted RBP9.01□□□□□ -0.97
CLIP1-210ENST00000538120 KIAA0141Q14154 515 aaPredicted RBP9.01□□□□□ -0.97
CLIP1-210ENST00000538120 C3orf36Q3SXR2 165 aa9.01□□□□□ -0.97
CLIP1-210ENST00000538120 PYY3Q5JQD4 70 aa9.01□□□□□ -0.97
CLIP1-210ENST00000538120 GPR157Q5UAW9 335 aa9.01□□□□□ -0.97
CLIP1-210ENST00000538120 SPSB3Q6PJ21 355 aa9.01□□□□□ -0.97
CLIP1-210ENST00000538120 TBC1D26Q86UD7 250 aa9.01□□□□□ -0.97
CLIP1-210ENST00000538120 FAM185AQ8N0U4 392 aa9.01□□□□□ -0.97
CLIP1-210ENST00000538120 TMEM171Q8WVE6 324 aa9.01□□□□□ -0.97
CLIP1-210ENST00000538120 MUCL1Q96DR8 90 aa9.01□□□□□ -0.97
CLIP1-210ENST00000538120 PBDC1Q9BVG4 233 aa9.01□□□□□ -0.97
CLIP1-210ENST00000538120 TMPRSS5Q9H3S3 457 aa9.01□□□□□ -0.97
CLIP1-210ENST00000538120 OR1A1Q9P1Q5 309 aa9.01□□□□□ -0.97
CLIP1-210ENST00000538120 WIPI2Q9Y4P8 454 aa9.01□□□□□ -0.97
CLIP1-210ENST00000538120 APC2O95996 2303 aa9.01□□□□□ -0.97
CLIP1-210ENST00000538120 A0A0G2JNJ9 132 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 IGSF23A1L1A6 192 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 NKX2-6A6NCS4 301 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 NXPH3O95157 252 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 TFF1P04155 84 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 ATP6V0CP27449 155 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 OR2B11Q5JQS5 317 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 ACP7Q6ZNF0 438 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 LGI3Q8N145 548 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 OR4D5Q8NGN0 318 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 OR2G3Q8NGZ4 309 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 RAB39BQ96DA2 213 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 TOLLIPQ9H0E2 274 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 MAGT1Q9H0U3 335 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 MBNL3Q9NUK0 354 aaKnown RBP9□□□□□ -0.97
CLIP1-210ENST00000538120 UFSP2Q9NUQ7 469 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 Q9UFV3 132 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 OR14J1Q9UGF5 321 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 STRAPQ9Y3F4 350 aaKnown RBP9□□□□□ -0.97
CLIP1-210ENST00000538120 RBFOX3A6NFN3 312 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 NPIPB11E5RHQ5 1161 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 H3BQ15 152 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 WRBO00258 174 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 HSD17B6O14756 317 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 BMP5P22003 454 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 NDUFA6P56556 154 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 PRR30Q53SZ7 412 aaPredicted RBP9□□□□□ -0.97
CLIP1-210ENST00000538120 VHLLQ6RSH7 139 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 TMEM222Q9H0R3 208 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 ZNF835Q9Y2P0 537 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 OR2W1Q9Y3N9 320 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 SPTBN2O15020 2390 aa9□□□□□ -0.97
CLIP1-210ENST00000538120 TNFRSF6BO95407 300 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 IFNA17P01571 189 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 HOXA5P20719 270 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 EPHA1P21709 976 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 CCKARP32238 428 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 MAS1LP35410 378 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 RAB5CP51148 216 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 ERVFRD-1P60508 538 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 RUNX1Q01196 453 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 TESK1Q15569 626 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 SPRNQ5BIV9 151 aa8.99□□□□□ -0.97
CLIP1-210ENST00000538120 MOB1BQ7L9L4 216 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms