RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 DNAH9Q9NYC9 4486 aa11.7□□□□□ -0.54
LRRK1-211ENST00000538064 SAA2-SAA4A0A096LPE2 208 aa11.7□□□□□ -0.54
LRRK1-211ENST00000538064 A0A0A6YYH2 397 aa11.7□□□□□ -0.54
LRRK1-211ENST00000538064 A6NJ64 397 aa11.7□□□□□ -0.54
LRRK1-211ENST00000538064 K7EIL1 84 aa11.7□□□□□ -0.54
LRRK1-211ENST00000538064 IGF1P05019 195 aa11.7□□□□□ -0.54
LRRK1-211ENST00000538064 RPLP1P05386 114 aaKnown RBP11.7□□□□□ -0.54
LRRK1-211ENST00000538064 ELANEP08246 267 aa11.7□□□□□ -0.54
LRRK1-211ENST00000538064 SAA2P0DJI9 122 aaPredicted RBP11.7□□□□□ -0.54
LRRK1-211ENST00000538064 GNB3P16520 340 aa11.7□□□□□ -0.54
LRRK1-211ENST00000538064 VDAC1P21796 283 aa11.7□□□□□ -0.54
LRRK1-211ENST00000538064 KRTAP10-11P60412 298 aa11.7□□□□□ -0.54
LRRK1-211ENST00000538064 ARFRP1Q13795 201 aa11.7□□□□□ -0.54
LRRK1-211ENST00000538064 CTF1Q16619 201 aa11.7□□□□□ -0.54
LRRK1-211ENST00000538064 CXorf66Q5JRM2 361 aaPredicted RBP11.7□□□□□ -0.54
LRRK1-211ENST00000538064 OR5H6Q8NGV6 325 aa11.7□□□□□ -0.54
LRRK1-211ENST00000538064 RBMXL1Q96E39 390 aaKnown RBP11.7□□□□□ -0.54
LRRK1-211ENST00000538064 NABP2Q9BQ15 211 aa11.7□□□□□ -0.54
LRRK1-211ENST00000538064 HDHD3Q9BSH5 251 aaPredicted RBP11.7□□□□□ -0.54
LRRK1-211ENST00000538064 MCRIP2Q9BUT9 160 aaKnown RBP11.7□□□□□ -0.54
LRRK1-211ENST00000538064 NAA50Q9GZZ1 169 aaKnown RBP11.7□□□□□ -0.54
LRRK1-211ENST00000538064 Q9N2K0 584 aa11.7□□□□□ -0.54
LRRK1-211ENST00000538064 DIABLOQ9NR28 239 aa11.7□□□□□ -0.54
LRRK1-211ENST00000538064 ZNF107Q9UII5 783 aaPredicted RBP11.7□□□□□ -0.54
LRRK1-211ENST00000538064 KCNK7Q9Y2U2 307 aa11.7□□□□□ -0.54
LRRK1-211ENST00000538064 NOL3O60936 208 aaKnown RBP11.69□□□□□ -0.54
LRRK1-211ENST00000538064 IGHG4P01861 327 aa11.69□□□□□ -0.54
LRRK1-211ENST00000538064 GSTP1P09211 210 aaKnown RBP11.69□□□□□ -0.54
LRRK1-211ENST00000538064 OR5H8P0DN80 308 aa11.69□□□□□ -0.54
LRRK1-211ENST00000538064 OR3A3P47888 321 aa11.69□□□□□ -0.54
LRRK1-211ENST00000538064 RORCP51449 518 aa11.69□□□□□ -0.54
LRRK1-211ENST00000538064 ACTBP60709 375 aa11.69□□□□□ -0.54
LRRK1-211ENST00000538064 HLA-DRB3P79483 266 aa11.69□□□□□ -0.54
LRRK1-211ENST00000538064 PITPNAQ00169 270 aa11.69□□□□□ -0.54
LRRK1-211ENST00000538064 CDNFQ49AH0 187 aa11.69□□□□□ -0.54
LRRK1-211ENST00000538064 CLVS1Q8IUQ0 354 aaPredicted RBP11.69□□□□□ -0.54
LRRK1-211ENST00000538064 OR8U1Q8NH10 309 aa11.69□□□□□ -0.54
LRRK1-211ENST00000538064 IL1F10Q8WWZ1 152 aa11.69□□□□□ -0.54
LRRK1-211ENST00000538064 ACOT12Q8WYK0 555 aa11.69□□□□□ -0.54
LRRK1-211ENST00000538064 RAX2Q96IS3 184 aa11.69□□□□□ -0.54
LRRK1-211ENST00000538064 DCSTAMPQ9H295 470 aa11.69□□□□□ -0.54
LRRK1-211ENST00000538064 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.69□□□□□ -0.54
LRRK1-211ENST00000538064 NBR2O15453 112 aa11.68□□□□□ -0.54
LRRK1-211ENST00000538064 HLA-DRB1P01911 266 aa11.68□□□□□ -0.54
LRRK1-211ENST00000538064 HOXD3P31249 432 aaPredicted RBP11.68□□□□□ -0.54
LRRK1-211ENST00000538064 KIR2DS1Q14954 304 aa11.68□□□□□ -0.54
LRRK1-211ENST00000538064 HACD4Q5VWC8 232 aa11.68□□□□□ -0.54
LRRK1-211ENST00000538064 LCNL1Q6ZST4 164 aa11.68□□□□□ -0.54
LRRK1-211ENST00000538064 RAB2BQ8WUD1 216 aa11.68□□□□□ -0.54
LRRK1-211ENST00000538064 AP3S1Q92572 193 aa11.68□□□□□ -0.54
LRRK1-211ENST00000538064 S100A16Q96FQ6 103 aaKnown RBP11.68□□□□□ -0.54
LRRK1-211ENST00000538064 BCL7BQ9BQE9 202 aa11.68□□□□□ -0.54
LRRK1-211ENST00000538064 ZNF251Q9BRH9 671 aa11.68□□□□□ -0.54
LRRK1-211ENST00000538064 PIPOXQ9P0Z9 390 aa11.68□□□□□ -0.54
LRRK1-211ENST00000538064 TRDCB7Z8K6 153 aa11.67□□□□□ -0.54
LRRK1-211ENST00000538064 CCL24O00175 119 aa11.67□□□□□ -0.54
LRRK1-211ENST00000538064 ITGB1BP1O14713 200 aa11.67□□□□□ -0.54
LRRK1-211ENST00000538064 ST8SIA5O15466 376 aa11.67□□□□□ -0.54
LRRK1-211ENST00000538064 HSPA12AO43301 675 aa11.67□□□□□ -0.54
LRRK1-211ENST00000538064 FCGR3AP08637 254 aa11.67□□□□□ -0.54
LRRK1-211ENST00000538064 ZBTB25P24278 435 aa11.67□□□□□ -0.54
LRRK1-211ENST00000538064 PSMB8P28062 276 aa11.67□□□□□ -0.54
LRRK1-211ENST00000538064 CDX1P47902 265 aaPredicted RBP11.67□□□□□ -0.54
LRRK1-211ENST00000538064 TMBIM6P55061 237 aa11.67□□□□□ -0.54
LRRK1-211ENST00000538064 GNG2P59768 71 aa11.67□□□□□ -0.54
LRRK1-211ENST00000538064 SRSF7Q16629 238 aaKnown RBP eCLIP11.67□□□□□ -0.54
LRRK1-211ENST00000538064 UBE2NLQ5JXB2 153 aa11.67□□□□□ -0.54
LRRK1-211ENST00000538064 MYOZ3Q8TDC0 251 aa11.67□□□□□ -0.54
LRRK1-211ENST00000538064 C4orf3Q8WVX3 66 aa11.67□□□□□ -0.54
LRRK1-211ENST00000538064 SLC25A38Q96DW6 304 aa11.67□□□□□ -0.54
LRRK1-211ENST00000538064 SLC23A1Q9UHI7 598 aa11.67□□□□□ -0.54
LRRK1-211ENST00000538064 TRAV18A0A075B6X5 111 aa11.66□□□□□ -0.54
LRRK1-211ENST00000538064 WI2-2373I1.2A0A1W2PRP0 233 aa11.66□□□□□ -0.54
LRRK1-211ENST00000538064 OR5H14A6NHG9 310 aa11.66□□□□□ -0.54
LRRK1-211ENST00000538064 RAB29O14966 203 aa11.66□□□□□ -0.54
LRRK1-211ENST00000538064 NDUFA3O95167 84 aa11.66□□□□□ -0.54
LRRK1-211ENST00000538064 ZNF182P17025 639 aaPredicted RBP11.66□□□□□ -0.54
LRRK1-211ENST00000538064 DTYMKP23919 212 aa11.66□□□□□ -0.54
LRRK1-211ENST00000538064 CNTFRP26992 372 aa11.66□□□□□ -0.54
LRRK1-211ENST00000538064 C5orf64Q2M2E5 130 aa11.66□□□□□ -0.54
LRRK1-211ENST00000538064 DEFB136Q30KP8 78 aa11.66□□□□□ -0.54
LRRK1-211ENST00000538064 ZNF260Q3ZCT1 412 aa11.66□□□□□ -0.54
LRRK1-211ENST00000538064 MZT2AQ6P582 158 aa11.66□□□□□ -0.54
LRRK1-211ENST00000538064 SAMD12Q8N8I0 201 aa11.66□□□□□ -0.54
LRRK1-211ENST00000538064 NPBQ8NG41 125 aa11.66□□□□□ -0.54
LRRK1-211ENST00000538064 OR4A4PQ8NGN8 299 aa11.66□□□□□ -0.54
LRRK1-211ENST00000538064 RITA1Q96K30 269 aa11.66□□□□□ -0.54
LRRK1-211ENST00000538064 CMTM3Q96MX0 182 aa11.66□□□□□ -0.54
LRRK1-211ENST00000538064 DUX3Q96PT4 197 aa11.66□□□□□ -0.54
LRRK1-211ENST00000538064 PARP12Q9H0J9 701 aaKnown RBP11.66□□□□□ -0.54
LRRK1-211ENST00000538064 KIAA1456Q9P272 454 aa11.66□□□□□ -0.54
LRRK1-211ENST00000538064 COMMD3Q9UBI1 195 aa11.66□□□□□ -0.54
LRRK1-211ENST00000538064 IGHV7-81A0A0B4J1V7 117 aa11.65□□□□□ -0.54
LRRK1-211ENST00000538064 TMEM235A6NFC5 223 aa11.65□□□□□ -0.54
LRRK1-211ENST00000538064 ATP6V0E1O15342 81 aa11.65□□□□□ -0.54
LRRK1-211ENST00000538064 FABP7O15540 132 aa11.65□□□□□ -0.54
LRRK1-211ENST00000538064 XRCC3O43542 346 aa11.65□□□□□ -0.54
LRRK1-211ENST00000538064 SCTP09683 121 aa11.65□□□□□ -0.54
LRRK1-211ENST00000538064 PPIFP30405 207 aaKnown RBP11.65□□□□□ -0.54
LRRK1-211ENST00000538064 FHL3Q13643 280 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms