RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 C5orf64Q2M2E5 130 aa11.19□□□□□ -0.62
UBE3B-206ENST00000536398 IDNKQ5T6J7 187 aa11.19□□□□□ -0.62
UBE3B-206ENST00000536398 C8orf86Q6ZUL3 223 aa11.19□□□□□ -0.62
UBE3B-206ENST00000536398 ZNF383Q8NA42 475 aa11.19□□□□□ -0.62
UBE3B-206ENST00000536398 OR5AN1Q8NGI8 311 aa11.19□□□□□ -0.62
UBE3B-206ENST00000536398 OR8U1Q8NH10 309 aa11.19□□□□□ -0.62
UBE3B-206ENST00000536398 NUDCD2Q8WVJ2 157 aa11.19□□□□□ -0.62
UBE3B-206ENST00000536398 SLC25A38Q96DW6 304 aa11.19□□□□□ -0.62
UBE3B-206ENST00000536398 YIPF6Q96EC8 236 aa11.19□□□□□ -0.62
UBE3B-206ENST00000536398 DUX3Q96PT4 197 aa11.19□□□□□ -0.62
UBE3B-206ENST00000536398 CABLES2Q9BTV7 478 aa11.19□□□□□ -0.62
UBE3B-206ENST00000536398 ST6GALNAC5Q9BVH7 336 aa11.19□□□□□ -0.62
UBE3B-206ENST00000536398 TOLLIPQ9H0E2 274 aa11.19□□□□□ -0.62
UBE3B-206ENST00000536398 ZNF221Q9UK13 617 aa11.19□□□□□ -0.62
UBE3B-206ENST00000536398 WSB1Q9Y6I7 421 aa11.19□□□□□ -0.62
UBE3B-206ENST00000536398 IGHV7-81A0A0B4J1V7 117 aa11.18□□□□□ -0.62
UBE3B-206ENST00000536398 TMEM235A6NFC5 223 aa11.18□□□□□ -0.62
UBE3B-206ENST00000536398 H7C2Y5 167 aa11.18□□□□□ -0.62
UBE3B-206ENST00000536398 M0R1X1 148 aa11.18□□□□□ -0.62
UBE3B-206ENST00000536398 NDUFA3O95167 84 aa11.18□□□□□ -0.62
UBE3B-206ENST00000536398 PF4P02776 101 aa11.18□□□□□ -0.62
UBE3B-206ENST00000536398 IGKV1-16P04430 117 aa11.18□□□□□ -0.62
UBE3B-206ENST00000536398 IGF1P05019 195 aa11.18□□□□□ -0.62
UBE3B-206ENST00000536398 CD33P20138 364 aa11.18□□□□□ -0.62
UBE3B-206ENST00000536398 LSM3P62310 102 aaKnown RBP11.18□□□□□ -0.62
UBE3B-206ENST00000536398 KIR2DS1Q14954 304 aa11.18□□□□□ -0.62
UBE3B-206ENST00000536398 ZNF260Q3ZCT1 412 aa11.18□□□□□ -0.62
UBE3B-206ENST00000536398 KPRPQ5T749 579 aaPredicted RBP11.18□□□□□ -0.62
UBE3B-206ENST00000536398 HACD4Q5VWC8 232 aa11.18□□□□□ -0.62
UBE3B-206ENST00000536398 LIN54Q6MZP7 749 aa11.18□□□□□ -0.62
UBE3B-206ENST00000536398 TEX38Q6PEX7 206 aa11.18□□□□□ -0.62
UBE3B-206ENST00000536398 OR10J5Q8NHC4 309 aa11.18□□□□□ -0.62
UBE3B-206ENST00000536398 GHITMQ9H3K2 345 aa11.18□□□□□ -0.62
UBE3B-206ENST00000536398 FBXL15Q9H469 300 aa11.18□□□□□ -0.62
UBE3B-206ENST00000536398 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.18□□□□□ -0.62
UBE3B-206ENST00000536398 SDHAF2Q9NX18 166 aa11.18□□□□□ -0.62
UBE3B-206ENST00000536398 RHBDL2Q9NX52 303 aa11.18□□□□□ -0.62
UBE3B-206ENST00000536398 WASHC3Q9Y3C0 194 aa11.18□□□□□ -0.62
UBE3B-206ENST00000536398 A0A087WXM4 84 aa11.17□□□□□ -0.62
UBE3B-206ENST00000536398 OR5H14A6NHG9 310 aa11.17□□□□□ -0.62
UBE3B-206ENST00000536398 NUDT19A8MXV4 375 aa11.17□□□□□ -0.62
UBE3B-206ENST00000536398 ATP6V0E1O15342 81 aa11.17□□□□□ -0.62
UBE3B-206ENST00000536398 SSX5O60225 188 aa11.17□□□□□ -0.62
UBE3B-206ENST00000536398 TNFAIP8O95379 198 aa11.17□□□□□ -0.62
UBE3B-206ENST00000536398 HLA-DRB1P01911 266 aa11.17□□□□□ -0.62
UBE3B-206ENST00000536398 GSTP1P09211 210 aaKnown RBP11.17□□□□□ -0.62
UBE3B-206ENST00000536398 MC5RP33032 325 aa11.17□□□□□ -0.62
UBE3B-206ENST00000536398 SERPINB10P48595 397 aa11.17□□□□□ -0.62
UBE3B-206ENST00000536398 NDPQ00604 133 aa11.17□□□□□ -0.62
UBE3B-206ENST00000536398 Q6ZS49 121 aa11.17□□□□□ -0.62
UBE3B-206ENST00000536398 MRPL41Q8IXM3 137 aaKnown RBP11.17□□□□□ -0.62
UBE3B-206ENST00000536398 COMMD1Q8N668 190 aa11.17□□□□□ -0.62
UBE3B-206ENST00000536398 LINC00482Q8N8I6 264 aa11.17□□□□□ -0.62
UBE3B-206ENST00000536398 KLHL30-AS1Q8NEE0 82 aa11.17□□□□□ -0.62
UBE3B-206ENST00000536398 CLCC1Q96S66 551 aa11.17□□□□□ -0.62
UBE3B-206ENST00000536398 OR2D2Q9H210 308 aa11.17□□□□□ -0.62
UBE3B-206ENST00000536398 OR51J1Q9H342 316 aa11.17□□□□□ -0.62
UBE3B-206ENST00000536398 PARP11Q9NR21 331 aa11.17□□□□□ -0.62
UBE3B-206ENST00000536398 ZFP57Q9NU63 452 aa11.17□□□□□ -0.62
UBE3B-206ENST00000536398 FBXO7Q9Y3I1 522 aa11.17□□□□□ -0.62
UBE3B-206ENST00000536398 J3QRK9 145 aa11.16□□□□□ -0.62
UBE3B-206ENST00000536398 RRHO14718 337 aa11.16□□□□□ -0.62
UBE3B-206ENST00000536398 RRP9O43818 475 aaKnown RBP11.16□□□□□ -0.62
UBE3B-206ENST00000536398 AIREO43918 545 aa11.16□□□□□ -0.62
UBE3B-206ENST00000536398 IGHG4P01861 327 aa11.16□□□□□ -0.62
UBE3B-206ENST00000536398 TFAP2AP05549 437 aa11.16□□□□□ -0.62
UBE3B-206ENST00000536398 EGR2P11161 476 aaPredicted RBP11.16□□□□□ -0.62
UBE3B-206ENST00000536398 VDAC1P21796 283 aa11.16□□□□□ -0.62
UBE3B-206ENST00000536398 DTYMKP23919 212 aa11.16□□□□□ -0.62
UBE3B-206ENST00000536398 RPS19P39019 145 aaKnown RBP11.16□□□□□ -0.62
UBE3B-206ENST00000536398 THBS3P49746 956 aa11.16□□□□□ -0.62
UBE3B-206ENST00000536398 FOXE3Q13461 319 aa11.16□□□□□ -0.62
UBE3B-206ENST00000536398 PSG5Q15238 335 aa11.16□□□□□ -0.62
UBE3B-206ENST00000536398 SRSF7Q16629 238 aaKnown RBP eCLIP11.16□□□□□ -0.62
UBE3B-206ENST00000536398 DEFB136Q30KP8 78 aa11.16□□□□□ -0.62
UBE3B-206ENST00000536398 H1FOOQ8IZA3 346 aaPredicted RBP11.16□□□□□ -0.62
UBE3B-206ENST00000536398 GINS4Q9BRT9 223 aa11.16□□□□□ -0.62
UBE3B-206ENST00000536398 GON7Q9BXV9 100 aa11.16□□□□□ -0.62
UBE3B-206ENST00000536398 KLK15Q9H2R5 256 aa11.16□□□□□ -0.62
UBE3B-206ENST00000536398 KIAA1456Q9P272 454 aa11.16□□□□□ -0.62
UBE3B-206ENST00000536398 GAB2Q9UQC2 676 aa11.16□□□□□ -0.62
UBE3B-206ENST00000536398 TRAV18A0A075B6X5 111 aa11.15□□□□□ -0.62
UBE3B-206ENST00000536398 PTHLHP12272 177 aa11.15□□□□□ -0.62
UBE3B-206ENST00000536398 PSMB8P28062 276 aa11.15□□□□□ -0.62
UBE3B-206ENST00000536398 PPIFP30405 207 aaKnown RBP11.15□□□□□ -0.62
UBE3B-206ENST00000536398 GNG2P59768 71 aa11.15□□□□□ -0.62
UBE3B-206ENST00000536398 CX3CL1P78423 397 aa11.15□□□□□ -0.62
UBE3B-206ENST00000536398 CXorf66Q5JRM2 361 aaPredicted RBP11.15□□□□□ -0.62
UBE3B-206ENST00000536398 FOXB2Q5VYV0 432 aa11.15□□□□□ -0.62
UBE3B-206ENST00000536398 ZNF695Q8IW36 515 aa11.15□□□□□ -0.62
UBE3B-206ENST00000536398 RNF152Q8N8N0 203 aa11.15□□□□□ -0.62
UBE3B-206ENST00000536398 RAX2Q96IS3 184 aa11.15□□□□□ -0.62
UBE3B-206ENST00000536398 TPSG1Q9NRR2 321 aa11.15□□□□□ -0.62
UBE3B-206ENST00000536398 TRAV41A0A0B4J266 112 aa11.14□□□□□ -0.63
UBE3B-206ENST00000536398 TRIM64CA6NLI5 447 aa11.14□□□□□ -0.63
UBE3B-206ENST00000536398 DIRAS3O95661 229 aa11.14□□□□□ -0.63
UBE3B-206ENST00000536398 FCER2P06734 321 aa11.14□□□□□ -0.63
UBE3B-206ENST00000536398 ELANEP08246 267 aa11.14□□□□□ -0.63
UBE3B-206ENST00000536398 NFYAP23511 347 aaPredicted RBP11.14□□□□□ -0.63
UBE3B-206ENST00000536398 RPS16P62249 146 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms