RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 UBE2G2P60604 165 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 C10orf128Q5T292 105 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 DOK3Q7L591 496 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 SLC24A4Q8NFF2 622 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 OR5AU1Q8NGC0 362 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 SCGB1C1Q8TD33 95 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 PIGTQ969N2 578 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 YPEL2Q96QA6 119 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 CSTL1Q9H114 145 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 PLK3Q9H4B4 646 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 ZNF286AQ9HBT8 521 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 UBE2J1Q9Y385 318 aaPredicted RBP11.91□□□□□ -0.5
LIG1-203ENST00000536218 KIAA2026Q5HYC2 2103 aa11.91□□□□□ -0.5
LIG1-203ENST00000536218 IGKV1-9A0A0C4DH69 117 aa11.9□□□□□ -0.5
LIG1-203ENST00000536218 NEURL1O76050 574 aa11.9□□□□□ -0.5
LIG1-203ENST00000536218 TMEM50AO95807 157 aa11.9□□□□□ -0.5
LIG1-203ENST00000536218 PPBPP02775 128 aa11.9□□□□□ -0.5
LIG1-203ENST00000536218 MTCP1P56278 107 aa11.9□□□□□ -0.5
LIG1-203ENST00000536218 TMEM267Q0VDI3 215 aaPredicted RBP11.9□□□□□ -0.5
LIG1-203ENST00000536218 CEACAM16Q2WEN9 425 aa11.9□□□□□ -0.5
LIG1-203ENST00000536218 SNAI3Q3KNW1 292 aa11.9□□□□□ -0.5
LIG1-203ENST00000536218 BAGE3Q86Y29 109 aa11.9□□□□□ -0.5
LIG1-203ENST00000536218 BAGE2Q86Y30 109 aa11.9□□□□□ -0.5
LIG1-203ENST00000536218 ZNF695Q8IW36 515 aa11.9□□□□□ -0.5
LIG1-203ENST00000536218 C20orf196Q8IYI0 205 aa11.9□□□□□ -0.5
LIG1-203ENST00000536218 SAXO1Q8IYX7 474 aa11.9□□□□□ -0.5
LIG1-203ENST00000536218 KCNE4Q8WWG9 221 aa11.9□□□□□ -0.5
LIG1-203ENST00000536218 LOXL4Q96JB6 756 aa11.9□□□□□ -0.5
LIG1-203ENST00000536218 ADAM20O43506 726 aa11.9□□□□□ -0.5
LIG1-203ENST00000536218 CHST1O43916 411 aa11.9□□□□□ -0.5
LIG1-203ENST00000536218 KBTBD11O94819 623 aa11.9□□□□□ -0.5
LIG1-203ENST00000536218 OR1C1Q15619 314 aa11.9□□□□□ -0.5
LIG1-203ENST00000536218 ZNF726P1Q15940 193 aa11.9□□□□□ -0.5
LIG1-203ENST00000536218 MRGPRGQ86SM5 289 aa11.9□□□□□ -0.5
LIG1-203ENST00000536218 ZDHHC11Q9H8X9 412 aa11.9□□□□□ -0.5
LIG1-203ENST00000536218 BOKQ9UMX3 212 aaPredicted RBP11.9□□□□□ -0.5
LIG1-203ENST00000536218 PIGLQ9Y2B2 252 aa11.9□□□□□ -0.5
LIG1-203ENST00000536218 TRAV39A0A0B4J263 110 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 SERPINE3A8MV23 424 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 SERF1AO75920 110 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 GYPAP02724 150 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 MAGEA5P43359 124 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 PLGLB1Q02325 96 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 C3AR1Q16581 482 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 SPIN3Q5JUX0 258 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 OR2M7Q8NG81 312 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 OR4F5Q8NH21 305 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 LHX4Q969G2 390 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 STARD4Q96DR4 205 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 OR4F4Q96R69 305 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 IMMP2LQ96T52 175 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 RNF2Q99496 336 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 PARLQ9H300 379 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 ZNF703Q9H7S9 590 aaPredicted RBP11.89□□□□□ -0.51
LIG1-203ENST00000536218 SEPSECSQ9HD40 501 aaKnown RBP11.89□□□□□ -0.51
LIG1-203ENST00000536218 UQCR10Q9UDW1 63 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 ZNF716A6NP11 495 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 DIRC3C9JPN6 131 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 ZNF32P17041 273 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 ADMP35318 185 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 FFAR4Q5NUL3 377 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 S100A7AQ86SG5 101 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 P2RX4Q99571 388 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 SHANK1Q9Y566 2161 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 OTOGLQ3ZCN5 2332 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 MSMO1Q15800 293 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 Q5PR19 223 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 LINC01551Q86U37 167 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 FGFBP3Q8TAT2 258 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 NECAP2Q9NVZ3 263 aa11.89□□□□□ -0.51
LIG1-203ENST00000536218 FRYQ5TBA9 3013 aa11.88□□□□□ -0.51
LIG1-203ENST00000536218 TRAV1-1A0A0B4J248 108 aa11.88□□□□□ -0.51
LIG1-203ENST00000536218 FCGR2AP12318 317 aa11.88□□□□□ -0.51
LIG1-203ENST00000536218 RIPPLY3P57055 190 aa11.88□□□□□ -0.51
LIG1-203ENST00000536218 OR4B1Q8NGF8 309 aa11.88□□□□□ -0.51
LIG1-203ENST00000536218 PLPPR1Q8TBJ4 325 aa11.88□□□□□ -0.51
LIG1-203ENST00000536218 SPTSSAQ969W0 71 aa11.88□□□□□ -0.51
LIG1-203ENST00000536218 RAC2P15153 192 aa11.88□□□□□ -0.51
LIG1-203ENST00000536218 UBE2NP61088 152 aaKnown RBP11.88□□□□□ -0.51
LIG1-203ENST00000536218 MEF2BQ02080 365 aaPredicted RBP11.88□□□□□ -0.51
LIG1-203ENST00000536218 KISS1Q15726 138 aa11.88□□□□□ -0.51
LIG1-203ENST00000536218 OCIAD2Q56VL3 154 aa11.88□□□□□ -0.51
LIG1-203ENST00000536218 FAM27BQ5VT28 67 aa11.88□□□□□ -0.51
LIG1-203ENST00000536218 ZNF596Q8TC21 504 aa11.88□□□□□ -0.51
LIG1-203ENST00000536218 MRPL30Q8TCC3 161 aaKnown RBP11.88□□□□□ -0.51
LIG1-203ENST00000536218 SF3B5Q9BWJ5 86 aaKnown RBP11.88□□□□□ -0.51
LIG1-203ENST00000536218 BET1LQ9NYM9 111 aa11.88□□□□□ -0.51
LIG1-203ENST00000536218 DUXBA0A1W2PPF3 345 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 HYPMO75409 117 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 CCNOP22674 350 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 HERV-K104P61576 105 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 ATOH7Q8N100 152 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 WDYHV1Q96HA8 205 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 FOXB1Q99853 325 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 FAM173AQ9BQD7 235 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 PRRG4Q9BZD6 226 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 CST9LQ9H4G1 147 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 SLC39A9Q9NUM3 307 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 SLC45A2Q9UMX9 530 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 A0A096LPE4 126 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms