RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 RPL30P62888 115 aaKnown RBP11.3□□□□□ -0.6
HDAC4-214ENST00000535493 CXorf67Q86X51 503 aaPredicted RBP11.3□□□□□ -0.6
HDAC4-214ENST00000535493 ZNF114Q8NC26 417 aa11.3□□□□□ -0.6
HDAC4-214ENST00000535493 SDSLQ96GA7 329 aa11.3□□□□□ -0.6
HDAC4-214ENST00000535493 DMXL2Q8TDJ6 3036 aa11.3□□□□□ -0.6
HDAC4-214ENST00000535493 ZNF320A2RRD8 509 aa11.3□□□□□ -0.6
HDAC4-214ENST00000535493 GCH1P30793 250 aa11.3□□□□□ -0.6
HDAC4-214ENST00000535493 RIPPLY2Q5TAB7 128 aa11.3□□□□□ -0.6
HDAC4-214ENST00000535493 RNASEH2CQ8TDP1 164 aaKnown RBP11.3□□□□□ -0.6
HDAC4-214ENST00000535493 SAP25Q8TEE9 199 aa11.3□□□□□ -0.6
HDAC4-214ENST00000535493 PYGO2Q9BRQ0 406 aa11.3□□□□□ -0.6
HDAC4-214ENST00000535493 IER2Q9BTL4 223 aa11.3□□□□□ -0.6
HDAC4-214ENST00000535493 C12orf49Q9H741 205 aa11.3□□□□□ -0.6
HDAC4-214ENST00000535493 FAM90A10PA6NDY2 464 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 FAM90A18PA6NE21 464 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 FAM90A16PA6NEW6 464 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 FAM90A20PA6NIJ5 464 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 FAM90A8PA6NJQ4 464 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 FAM90A7PA6NKC0 464 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 FAM166BA8MTA8 275 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 FAM90A22PA8MWA6 464 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 FAM90A12PA8MX19 464 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 FAM90A5PA8MXJ8 464 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 FAM90A23PA8MXZ1 464 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 B4E171 279 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 FAM90A15PP0C7V4 464 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 FAM90A13PP0C7W8 464 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 FAM90A14PP0C7W9 464 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 FAM90A24PP0C7X0 464 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 TSPAN7P41732 249 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 RPL29P47914 159 aaKnown RBP11.29□□□□□ -0.6
HDAC4-214ENST00000535493 ATP5G3P48201 142 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 NUTF2P61970 127 aaKnown RBP11.29□□□□□ -0.6
HDAC4-214ENST00000535493 TNFRSF9Q07011 255 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 TPRX1Q8N7U7 411 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 OR5A2Q8NGI9 324 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 TMEM170AQ8WVE7 144 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 TECTBQ96PL2 329 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 NEU1Q99519 415 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 MRPL37Q9BZE1 423 aaKnown RBP11.29□□□□□ -0.6
HDAC4-214ENST00000535493 TP53TG5Q9Y2B4 290 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 A6NNC1 897 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 PATE3B3GLJ2 98 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 OR2H2O95918 312 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 CFIP05156 583 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 IL3RAP26951 378 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 SPCS3P61009 180 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 MCEMP1Q8IX19 187 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 OR2Y1Q8NGV0 311 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 PINX1Q96BK5 328 aaKnown RBP11.29□□□□□ -0.6
HDAC4-214ENST00000535493 WDR54Q9H977 334 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 OR6C3Q9NZP0 311 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 MED13Q9UHV7 2174 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 C11orf94C9JXX5 98 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 CDIPTO14735 213 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 NDUFB4O95168 129 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 PDGFBP01127 241 aaPredicted RBP11.29□□□□□ -0.6
HDAC4-214ENST00000535493 TMEM18Q96B42 140 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 IMMP2LQ96T52 175 aa11.29□□□□□ -0.6
HDAC4-214ENST00000535493 RP1L1Q8IWN7 2480 aaPredicted RBP11.29□□□□□ -0.6
HDAC4-214ENST00000535493 DEFB108AA8MXU0 73 aa11.28□□□□□ -0.6
HDAC4-214ENST00000535493 TGOLN2O43493 480 aa11.28□□□□□ -0.6
HDAC4-214ENST00000535493 S1PR2O95136 353 aa11.28□□□□□ -0.6
HDAC4-214ENST00000535493 THBS3P49746 956 aa11.28□□□□□ -0.6
HDAC4-214ENST00000535493 ALKBH6Q3KRA9 238 aa11.28□□□□□ -0.6
HDAC4-214ENST00000535493 ACTL10Q5JWF8 245 aa11.28□□□□□ -0.6
HDAC4-214ENST00000535493 KCNE4Q8WWG9 221 aa11.28□□□□□ -0.6
HDAC4-214ENST00000535493 LSM10Q969L4 123 aaKnown RBP11.28□□□□□ -0.6
HDAC4-214ENST00000535493 APOBEC3DQ96AK3 386 aaPredicted RBP11.28□□□□□ -0.6
HDAC4-214ENST00000535493 C5orf30Q96GV9 206 aa11.28□□□□□ -0.6
HDAC4-214ENST00000535493 OR2D2Q9H210 308 aa11.28□□□□□ -0.6
HDAC4-214ENST00000535493 PATZ1Q9HBE1 687 aaKnown RBP11.28□□□□□ -0.6
HDAC4-214ENST00000535493 IGHV3-43A0A0B4J1X8 118 aa11.28□□□□□ -0.6
HDAC4-214ENST00000535493 ODAMA1E959 279 aa11.28□□□□□ -0.6
HDAC4-214ENST00000535493 ANKRD30BLA7E2S9 258 aa11.28□□□□□ -0.6
HDAC4-214ENST00000535493 ZNF705FA8MVS1 300 aaPredicted RBP11.28□□□□□ -0.6
HDAC4-214ENST00000535493 IGHV3-13P01766 116 aa11.28□□□□□ -0.6
HDAC4-214ENST00000535493 IGHV3-7P01780 117 aa11.28□□□□□ -0.6
HDAC4-214ENST00000535493 ZNF705DP0CH99 300 aaPredicted RBP11.28□□□□□ -0.6
HDAC4-214ENST00000535493 ZNF705BP0CI00 300 aaPredicted RBP11.28□□□□□ -0.6
HDAC4-214ENST00000535493 IGHV3-43DP0DP04 118 aa11.28□□□□□ -0.6
HDAC4-214ENST00000535493 EDDM3BP56851 147 aa11.28□□□□□ -0.6
HDAC4-214ENST00000535493 TGFBR3Q03167 851 aa11.28□□□□□ -0.6
HDAC4-214ENST00000535493 OR52L2PQ8NGH6 319 aa11.28□□□□□ -0.6
HDAC4-214ENST00000535493 NOL4LQ96MY1 436 aaPredicted RBP11.28□□□□□ -0.6
HDAC4-214ENST00000535493 FRMD6-AS1P0C7T7 363 aa11.27□□□□□ -0.61
HDAC4-214ENST00000535493 FOLR3P41439 243 aa11.27□□□□□ -0.61
HDAC4-214ENST00000535493 CNN1P51911 297 aaKnown RBP11.27□□□□□ -0.61
HDAC4-214ENST00000535493 SRSF7Q16629 238 aaKnown RBP eCLIP11.27□□□□□ -0.613e-10■■■■■ 33.8
HDAC4-214ENST00000535493 LTC4SQ16873 150 aa11.27□□□□□ -0.61
HDAC4-214ENST00000535493 TMEM14EPQ6UXP3 125 aa11.27□□□□□ -0.61
HDAC4-214ENST00000535493 WDR86Q86TI4 376 aa11.27□□□□□ -0.61
HDAC4-214ENST00000535493 RFESDQ8TAC1 157 aa11.27□□□□□ -0.61
HDAC4-214ENST00000535493 WDYHV1Q96HA8 205 aa11.27□□□□□ -0.61
HDAC4-214ENST00000535493 DUSP23Q9BVJ7 150 aa11.27□□□□□ -0.61
HDAC4-214ENST00000535493 MSL2Q9HCI7 577 aa11.27□□□□□ -0.61
HDAC4-214ENST00000535493 FKBP11Q9NYL4 201 aa11.27□□□□□ -0.61
HDAC4-214ENST00000535493 POLR3KQ9Y2Y1 108 aaPredicted RBP11.27□□□□□ -0.61
HDAC4-214ENST00000535493 TRAPPC1Q9Y5R8 145 aa11.27□□□□□ -0.61
HDAC4-214ENST00000535493 CTXND1A0A1B0GTU2 59 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms