RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 TMEM220Q6QAJ8 160 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 AMTNQ6UX39 209 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 OR2W3Q7Z3T1 314 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 PPP1R42Q7Z4L9 355 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 GKN2Q86XP6 184 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 TRAM1L1Q8N609 369 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 PQLC3Q8N755 202 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 OR13C2Q8NGS9 318 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 CLHC1Q8NHS4 586 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 DTD1Q8TEA8 209 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 TNFAIP8L1Q8WVP5 186 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 RASD2Q96D21 266 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 VAT1Q99536 393 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 CLSTN2Q9H4D0 955 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 TMEM185BQ9H7F4 350 aa-0.66□□□□□ -2.52
COPB1-212ENST00000534771 LAMA2P24043 3122 aaKnown RBP-0.67□□□□□ -2.52
COPB1-212ENST00000534771 INSRP06213 1382 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 ACANP16112 2415 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 TRAV7A0A075B6U4 112 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 TRAV38-1A0A0B4J264 116 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 A0A1W2PRF3 423 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 A0A1W2PRM7 423 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 ANKRD20A5PA0PJZ0 165 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 OR2T8A6NH00 312 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 OR2AG2A6NM03 316 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 TRAPPC2LH3BP13 241 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 ZNF593O00488 134 aaPredicted RBP-0.67□□□□□ -2.52
COPB1-212ENST00000534771 CASC3O15234 703 aaKnown RBP-0.67□□□□□ -2.52
COPB1-212ENST00000534771 CREBL2O60519 120 aaPredicted RBP-0.67□□□□□ -2.52
COPB1-212ENST00000534771 HYPMO75409 117 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 CD3DP04234 171 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 SHBGP04278 402 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 LGALS1P09382 135 aaKnown RBP-0.67□□□□□ -2.52
COPB1-212ENST00000534771 CD7P09564 240 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 DEFA4P12838 97 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 ZNF25P17030 456 aaPredicted RBP-0.67□□□□□ -2.52
COPB1-212ENST00000534771 DESP17661 470 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 CCNOP22674 350 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 BRS3P32247 399 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 CA5AP35218 305 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 SLCO1A2P46721 670 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 GCLMP48507 274 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 NKX2-5P52952 324 aaPredicted RBP-0.67□□□□□ -2.52
COPB1-212ENST00000534771 UBE2IP63279 158 aaKnown RBP-0.67□□□□□ -2.52
COPB1-212ENST00000534771 QRFPP83859 136 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 GNA12Q03113 381 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 AKR1C1Q04828 323 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 PAFAH1B3Q15102 231 aaKnown RBP-0.67□□□□□ -2.52
COPB1-212ENST00000534771 C9orf64Q5T6V5 341 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 CARD17Q5XLA6 110 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 MTERF4Q7Z6M4 381 aaKnown RBP-0.67□□□□□ -2.52
COPB1-212ENST00000534771 ATPAF2Q8N5M1 289 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 DRAXINQ8NBI3 349 aaPredicted RBP-0.67□□□□□ -2.52
COPB1-212ENST00000534771 OR8B3Q8NGG8 313 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 OR5D18Q8NGL1 313 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 AKR7LQ8NHP1 331 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 RPS4Y2Q8TD47 263 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 OR5P2Q8WZ92 322 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 TPD52L3Q96J77 140 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 TRNT1Q96Q11 434 aaKnown RBP-0.67□□□□□ -2.52
COPB1-212ENST00000534771 UTP23Q9BRU9 249 aaKnown RBP-0.67□□□□□ -2.52
COPB1-212ENST00000534771 ELOVL6Q9H5J4 265 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 GEMIN7Q9H840 131 aaKnown RBP-0.67□□□□□ -2.52
COPB1-212ENST00000534771 GCNT4Q9P109 453 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 DNAJC12Q9UKB3 198 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 U3KQA8 63 aa-0.67□□□□□ -2.52
COPB1-212ENST00000534771 FAT2Q9NYQ8 4349 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 DENND4CQ5VZ89 1909 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 BSNQ9UPA5 3926 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 ABCA13Q86UQ4 5058 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 DSCAML1Q8TD84 2053 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 EPG5Q9HCE0 2579 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 TRAV8-2A0A0B4J237 113 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 IRGMA1A4Y4 181 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 FUOMA2VDF0 154 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 NCF1BA6NI72 391 aaPredicted RBP-0.68□□□□□ -2.52
COPB1-212ENST00000534771 TRIM64CA6NLI5 447 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 NCF1CA8MVU1 366 aaPredicted RBP-0.68□□□□□ -2.52
COPB1-212ENST00000534771 M0R378 163 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 PSMD11O00231 422 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 INE1O15225 51 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 SLC22A1O15245 554 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 ATP8B1O43520 1251 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 NDUFB2O95178 105 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 IGLV3-1P01715 115 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 PPBPP02775 128 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 LIPCP11150 499 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 CDK2P24941 298 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 TAGLN2P37802 199 aaKnown RBP-0.68□□□□□ -2.52
COPB1-212ENST00000534771 RPL28P46779 137 aaKnown RBP-0.68□□□□□ -2.52
COPB1-212ENST00000534771 DNASE1L1P49184 302 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 SPINT3P49223 89 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 TTPAP49638 278 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 RBM11P57052 281 aaKnown RBP-0.68□□□□□ -2.52
COPB1-212ENST00000534771 OR4D2P58180 307 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 AP1S1P61966 158 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 CDC37Q16543 378 aaPredicted RBP-0.68□□□□□ -2.52
COPB1-212ENST00000534771 NDUFA5Q16718 116 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 ATP6V1FQ16864 119 aa-0.68□□□□□ -2.52
COPB1-212ENST00000534771 TBC1D28Q2M2D7 210 aa-0.68□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms