RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 RAB5AP20339 215 aa2.57□□□□□ -2
USP48-215ENST00000534705 GABRR1P24046 479 aa2.57□□□□□ -2
USP48-215ENST00000534705 NAA10P41227 235 aaPredicted RBP2.57□□□□□ -2
USP48-215ENST00000534705 GLP1RP43220 463 aa2.57□□□□□ -2
USP48-215ENST00000534705 OMPP47874 163 aa2.57□□□□□ -2
USP48-215ENST00000534705 CCR8P51685 355 aa2.57□□□□□ -2
USP48-215ENST00000534705 PRKXP51817 358 aa2.57□□□□□ -2
USP48-215ENST00000534705 FOXA1P55317 472 aa2.57□□□□□ -2
USP48-215ENST00000534705 CTBP2P56545 445 aa2.57□□□□□ -2
USP48-215ENST00000534705 BTG2P78543 158 aa2.57□□□□□ -2
USP48-215ENST00000534705 VLDLRP98155 873 aa2.57□□□□□ -2
USP48-215ENST00000534705 OR2F1Q13607 317 aa2.57□□□□□ -2
USP48-215ENST00000534705 SURF2Q15527 256 aaPredicted RBP2.57□□□□□ -2
USP48-215ENST00000534705 TRAM1Q15629 374 aa2.57□□□□□ -2
USP48-215ENST00000534705 PRR30Q53SZ7 412 aaPredicted RBP2.57□□□□□ -2
USP48-215ENST00000534705 ACTBL2Q562R1 376 aa2.57□□□□□ -2
USP48-215ENST00000534705 DCST2Q5T1A1 773 aa2.57□□□□□ -2
USP48-215ENST00000534705 C12orf73Q69YU5 71 aa2.57□□□□□ -2
USP48-215ENST00000534705 HBMQ6B0K9 141 aa2.57□□□□□ -2
USP48-215ENST00000534705 CYB5R2Q6BCY4 276 aa2.57□□□□□ -2
USP48-215ENST00000534705 OR52W1Q6IF63 320 aa2.57□□□□□ -2
USP48-215ENST00000534705 LPCAT3Q6P1A2 487 aa2.57□□□□□ -2
USP48-215ENST00000534705 FAHD2BQ6P2I3 314 aaPredicted RBP2.57□□□□□ -2
USP48-215ENST00000534705 IGFL3Q6UXB1 125 aa2.57□□□□□ -2
USP48-215ENST00000534705 HEPN1Q6WQI6 88 aa2.57□□□□□ -2
USP48-215ENST00000534705 RPS27LQ71UM5 84 aaKnown RBP2.57□□□□□ -2
USP48-215ENST00000534705 TCF24Q7RTU0 167 aa2.57□□□□□ -2
USP48-215ENST00000534705 IFNEQ86WN2 208 aa2.57□□□□□ -2
USP48-215ENST00000534705 PRSS58Q8IYP2 241 aa2.57□□□□□ -2
USP48-215ENST00000534705 KIR2DL5AQ8N109 375 aa2.57□□□□□ -2
USP48-215ENST00000534705 ZFP82Q8N141 532 aa2.57□□□□□ -2
USP48-215ENST00000534705 CA13Q8N1Q1 262 aa2.57□□□□□ -2
USP48-215ENST00000534705 HIST3H2BBQ8N257 126 aa2.57□□□□□ -2
USP48-215ENST00000534705 C10orf111Q8N326 155 aa2.57□□□□□ -2
USP48-215ENST00000534705 ZNF664Q8N3J9 261 aa2.57□□□□□ -2
USP48-215ENST00000534705 RNF175Q8N4F7 328 aa2.57□□□□□ -2
USP48-215ENST00000534705 RELL2Q8NC24 303 aaPredicted RBP2.57□□□□□ -2
USP48-215ENST00000534705 PLPP5Q8NEB5 264 aa2.57□□□□□ -2
USP48-215ENST00000534705 CCDC54Q8NEL0 328 aa2.57□□□□□ -2
USP48-215ENST00000534705 SLC30A7Q8NEW0 376 aa2.57□□□□□ -2
USP48-215ENST00000534705 OR1S2Q8NGQ3 325 aa2.57□□□□□ -2
USP48-215ENST00000534705 OR1L6Q8NGR2 347 aa2.57□□□□□ -2
USP48-215ENST00000534705 OR13D1Q8NGV5 346 aa2.57□□□□□ -2
USP48-215ENST00000534705 OR2G2Q8NGZ5 317 aa2.57□□□□□ -2
USP48-215ENST00000534705 OR51Q1Q8NH59 317 aa2.57□□□□□ -2
USP48-215ENST00000534705 OR2V1Q8NHB1 315 aa2.57□□□□□ -2
USP48-215ENST00000534705 CA5BP1Q8WTZ4 195 aa2.57□□□□□ -2
USP48-215ENST00000534705 SMIM4Q8WVI0 70 aa2.57□□□□□ -2
USP48-215ENST00000534705 IL1F10Q8WWZ1 152 aa2.57□□□□□ -2
USP48-215ENST00000534705 C22orf15Q8WYQ4 148 aa2.57□□□□□ -2
USP48-215ENST00000534705 TNFRSF14Q92956 283 aa2.57□□□□□ -2
USP48-215ENST00000534705 TSLPQ969D9 159 aa2.57□□□□□ -2
USP48-215ENST00000534705 TMEM203Q969S6 136 aa2.57□□□□□ -2
USP48-215ENST00000534705 UBE2E3Q969T4 207 aa2.57□□□□□ -2
USP48-215ENST00000534705 MS4A6EQ96DS6 147 aa2.57□□□□□ -2
USP48-215ENST00000534705 GALNT14Q96FL9 552 aa2.57□□□□□ -2
USP48-215ENST00000534705 FAHD2AQ96GK7 314 aa2.57□□□□□ -2
USP48-215ENST00000534705 WFIKKN1Q96NZ8 548 aa2.57□□□□□ -2
USP48-215ENST00000534705 IP6K3Q96PC2 410 aa2.57□□□□□ -2
USP48-215ENST00000534705 OR5B2Q96R09 309 aa2.57□□□□□ -2
USP48-215ENST00000534705 NIPSNAP3BQ9BS92 247 aa2.57□□□□□ -2
USP48-215ENST00000534705 ZNF2Q9BSG1 426 aaPredicted RBP2.57□□□□□ -2
USP48-215ENST00000534705 MS4A8Q9BY19 250 aa2.57□□□□□ -2
USP48-215ENST00000534705 PARD6GQ9BYG4 376 aaPredicted RBP2.57□□□□□ -2
USP48-215ENST00000534705 RAB1BQ9H0U4 201 aa2.57□□□□□ -2
USP48-215ENST00000534705 C1orf198Q9H425 327 aa2.57□□□□□ -2
USP48-215ENST00000534705 MMP26Q9NRE1 261 aa2.57□□□□□ -2
USP48-215ENST00000534705 CA10Q9NS85 328 aa2.57□□□□□ -2
USP48-215ENST00000534705 UQCC1Q9NVA1 299 aa2.57□□□□□ -2
USP48-215ENST00000534705 TAS2R16Q9NYV7 291 aa2.57□□□□□ -2
USP48-215ENST00000534705 ZNF282Q9UDV7 671 aaPredicted RBP2.57□□□□□ -2
USP48-215ENST00000534705 CACFD1Q9UGQ2 172 aa2.57□□□□□ -2
USP48-215ENST00000534705 ZNF223Q9UK11 482 aaPredicted RBP2.57□□□□□ -2
USP48-215ENST00000534705 NXT1Q9UKK6 140 aaKnown RBP2.57□□□□□ -2
USP48-215ENST00000534705 NTNG1Q9Y2I2 539 aa2.57□□□□□ -2
USP48-215ENST00000534705 KIF25-AS1Q9Y6Z4 181 aa2.57□□□□□ -2
USP48-215ENST00000534705 ZNF469Q96JG9 3925 aaPredicted RBP2.57□□□□□ -2
USP48-215ENST00000534705 PDZD2O15018 2839 aa2.57□□□□□ -2
USP48-215ENST00000534705 MED13LQ71F56 2210 aa2.57□□□□□ -2
USP48-215ENST00000534705 VPS13CQ709C8 3753 aa2.57□□□□□ -2
USP48-215ENST00000534705 TACC2O95359 2948 aa2.56□□□□□ -2
USP48-215ENST00000534705 A0A0G2JN53 185 aa2.56□□□□□ -2
USP48-215ENST00000534705 A0A1B0GW64 132 aa2.56□□□□□ -2
USP48-215ENST00000534705 A0A1W2PRD5 423 aa2.56□□□□□ -2
USP48-215ENST00000534705 TMEM238C9JI98 176 aa2.56□□□□□ -2
USP48-215ENST00000534705 J3QKU1 62 aa2.56□□□□□ -2
USP48-215ENST00000534705 SIRPB1O00241 398 aa2.56□□□□□ -2
USP48-215ENST00000534705 GNGT2O14610 69 aa2.56□□□□□ -2
USP48-215ENST00000534705 RAMP1O60894 148 aa2.56□□□□□ -2
USP48-215ENST00000534705 HSBP1O75506 76 aa2.56□□□□□ -2
USP48-215ENST00000534705 GCM2O75603 506 aaPredicted RBP2.56□□□□□ -2
USP48-215ENST00000534705 ATP5LO75964 103 aa2.56□□□□□ -2
USP48-215ENST00000534705 ETHE1O95571 254 aa2.56□□□□□ -2
USP48-215ENST00000534705 IGHG3P01860 377 aa2.56□□□□□ -2
USP48-215ENST00000534705 FABP3P05413 133 aa2.56□□□□□ -2
USP48-215ENST00000534705 SERPINE2P07093 398 aa2.56□□□□□ -2
USP48-215ENST00000534705 SLC35G6P0C7Q6 338 aa2.56□□□□□ -2
USP48-215ENST00000534705 ZNF35P13682 527 aa2.56□□□□□ -2
USP48-215ENST00000534705 NQO2P16083 231 aa2.56□□□□□ -2
USP48-215ENST00000534705 PSMB1P20618 241 aaKnown RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms