RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	OR10G8	Q8NGN5	311 aa		13.49	□□□□□ -0.25
NCAPD3-213	ENST00000534532	CLEC9A	Q6UXN8	241 aa		13.49	□□□□□ -0.25
NCAPD3-213	ENST00000534532	EIF4E3	Q8N5X7	224 aa	Known RBP	13.49	□□□□□ -0.25
NCAPD3-213	ENST00000534532	TOLLIP	Q9H0E2	274 aa		13.49	□□□□□ -0.25
NCAPD3-213	ENST00000534532	IGLV3-12	A0A075B6K2	115 aa		13.49	□□□□□ -0.25
NCAPD3-213	ENST00000534532	HELT	A6NFD8	242 aa		13.49	□□□□□ -0.25
NCAPD3-213	ENST00000534532		E9PLN8	166 aa		13.49	□□□□□ -0.25
NCAPD3-213	ENST00000534532	MFNG	O00587	321 aa		13.49	□□□□□ -0.25
NCAPD3-213	ENST00000534532	C1QC	P02747	245 aa		13.49	□□□□□ -0.25
NCAPD3-213	ENST00000534532	ZNF137P	P52743	207 aa		13.49	□□□□□ -0.25
NCAPD3-213	ENST00000534532	TMEM37	Q8WXS4	190 aa		13.49	□□□□□ -0.25
NCAPD3-213	ENST00000534532	MS4A10	Q96PG2	267 aa		13.49	□□□□□ -0.25
NCAPD3-213	ENST00000534532	VKORC1	Q9BQB6	163 aa		13.49	□□□□□ -0.25
NCAPD3-213	ENST00000534532	OR10J1	P30954	320 aa		13.49	□□□□□ -0.25
NCAPD3-213	ENST00000534532	EAF1	Q96JC9	268 aa	Predicted RBP	13.49	□□□□□ -0.25
NCAPD3-213	ENST00000534532	RD3L	P0DJH9	198 aa		13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	LCN2	P80188	198 aa		13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	PNRC1	Q12796	327 aa	Predicted RBP	13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	BSX	Q3C1V8	233 aa		13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	CLLU1	Q5K131	121 aa		13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	FADS6	Q8N9I5	356 aa		13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	ADAD2	Q8NCV1	583 aa	Known RBP	13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	C7orf69	Q9H7B7	122 aa		13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	CTXND1	A0A1B0GTU2	59 aa		13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	LOC390937	A0A1W2PQ73	354 aa		13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	CFD	P00746	253 aa	Predicted RBP	13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	HIST1H3A	P68431	136 aa		13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	RFLNB	Q8N5W9	214 aa		13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	KLK13	Q9UKR3	277 aa		13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	HSF4	Q9ULV5	492 aa		13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	NPIPB11	E5RHQ5	1161 aa		13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	PDE6D	O43924	150 aa		13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	ADAM11	O75078	769 aa		13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	NRN1L	Q496H8	165 aa		13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	EEF1AKMT3	Q96AZ1	226 aa		13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	VAX2	Q9UIW0	290 aa		13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	ZIC3	O60481	467 aa		13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	G0S2	P27469	103 aa		13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	RAN	P62826	216 aa	Known RBP	13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	WDYHV1	Q96HA8	205 aa		13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	ELOVL1	Q9BW60	279 aa		13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	CEP250	Q9BV73	2442 aa		13.48	□□□□□ -0.25
NCAPD3-213	ENST00000534532	IGHV3OR16-12	A0A075B7B8	117 aa		13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	LOC102723996	A0A087X1L8	192 aa		13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532		A0A1W2PP11	408 aa		13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	C1orf100	Q5SVJ3	147 aa		13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	KCNK7	Q9Y2U2	307 aa		13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	MPDU1	O75352	247 aa		13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	PRSS1	P07477	247 aa		13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	TMEM255A	Q5JRV8	349 aa		13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	ABCA7	Q8IZY2	2146 aa		13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	CRIPAK	Q8N1N5	446 aa		13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	OR5P3	Q8WZ94	311 aa		13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	SRD5A3	Q9H8P0	318 aa		13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	GLIPR1	P48060	266 aa		13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	REL	Q04864	619 aa	Predicted RBP	13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	UNQ6494/PRO21346	Q6UXR6	183 aa		13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	BPIFA4P	Q86YQ2	179 aa		13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	SIRT4	Q9Y6E7	314 aa	Predicted RBP	13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	NTN3	O00634	580 aa	Predicted RBP	13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	SCO1	O75880	301 aa		13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	OVCH2	Q7RTZ1	564 aa		13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	C9orf106	Q8NAJ2	232 aa		13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	SYT8	Q8NBV8	401 aa		13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	DUX5	Q96PT3	197 aa		13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	DPM3	Q9P2X0	92 aa		13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	FXYD3	Q14802	87 aa		13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	QTRT1	Q9BXR0	403 aa	Known RBP	13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	WNK3	Q9BYP7	1800 aa		13.47	□□□□□ -0.25
NCAPD3-213	ENST00000534532	SRSF10	O75494	262 aa	Known RBP	13.46	□□□□□ -0.25
NCAPD3-213	ENST00000534532	AREG	P15514	252 aa		13.46	□□□□□ -0.25
NCAPD3-213	ENST00000534532	RAB9A	P51151	201 aa		13.46	□□□□□ -0.25
NCAPD3-213	ENST00000534532	HSPE1	P61604	102 aa	Known RBP	13.46	□□□□□ -0.25
NCAPD3-213	ENST00000534532	TMEM88	Q6PEY1	159 aa		13.46	□□□□□ -0.25
NCAPD3-213	ENST00000534532	GBGT1	Q8N5D6	347 aa		13.46	□□□□□ -0.25
NCAPD3-213	ENST00000534532	OR4B1	Q8NGF8	309 aa		13.46	□□□□□ -0.25
NCAPD3-213	ENST00000534532	OR4X2	Q8NGF9	303 aa		13.46	□□□□□ -0.25
NCAPD3-213	ENST00000534532	LSM10	Q969L4	123 aa	Known RBP	13.46	□□□□□ -0.25
NCAPD3-213	ENST00000534532	NRIP2	Q9BQI9	281 aa		13.46	□□□□□ -0.25
NCAPD3-213	ENST00000534532	IGHV2OR16-5	A0A0B4J2B6	119 aa		13.46	□□□□□ -0.25
NCAPD3-213	ENST00000534532	LINC00869	P0C866	280 aa		13.46	□□□□□ -0.25
NCAPD3-213	ENST00000534532	CFHR1	Q03591	330 aa		13.46	□□□□□ -0.25
NCAPD3-213	ENST00000534532	AANAT	Q16613	207 aa		13.46	□□□□□ -0.25
NCAPD3-213	ENST00000534532	ZNF430	Q9H8G1	570 aa	Predicted RBP	13.46	□□□□□ -0.25
NCAPD3-213	ENST00000534532	S1PR2	O95136	353 aa		13.46	□□□□□ -0.25
NCAPD3-213	ENST00000534532	SCGB1C2	P0DMR2	95 aa		13.46	□□□□□ -0.25
NCAPD3-213	ENST00000534532	MIXL1	Q9H2W2	232 aa		13.46	□□□□□ -0.25
NCAPD3-213	ENST00000534532	TMEM140	Q9NV12	185 aa		13.46	□□□□□ -0.25
NCAPD3-213	ENST00000534532	PAGE4	O60829	102 aa		13.46	□□□□□ -0.26
NCAPD3-213	ENST00000534532	DEDD	O75618	318 aa		13.45	□□□□□ -0.26
NCAPD3-213	ENST00000534532	MMP9	P14780	707 aa		13.45	□□□□□ -0.26
NCAPD3-213	ENST00000534532	RND2	P52198	227 aa		13.45	□□□□□ -0.26
NCAPD3-213	ENST00000534532	HERVK_113	P61574	105 aa		13.45	□□□□□ -0.26
NCAPD3-213	ENST00000534532	TMEM97	Q5BJF2	176 aa		13.45	□□□□□ -0.26
NCAPD3-213	ENST00000534532		A0A0G2JMM0	328 aa		13.45	□□□□□ -0.26
NCAPD3-213	ENST00000534532		A0A1W2PPB8	328 aa		13.45	□□□□□ -0.26
NCAPD3-213	ENST00000534532		A0A1W2PRS3	328 aa		13.45	□□□□□ -0.26
NCAPD3-213	ENST00000534532	KIR3DP1	A8MWS1	328 aa		13.45	□□□□□ -0.26
NCAPD3-213	ENST00000534532	CDRT15L2	A8MXV6	281 aa		13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms