RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 GLP1RP43220 463 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 OR3A1P47881 315 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 UQCRFS1P47985 274 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 SUPT4H1P63272 117 aaKnown RBP4.73□□□□□ -1.65
CHKA-208ENST00000533910 TNFAIP6P98066 277 aaPredicted RBP4.73□□□□□ -1.65
CHKA-208ENST00000533910 PPP1R1AQ13522 171 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 HERPUD1Q15011 391 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 HMGN3Q15651 99 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 TMEM128Q5BJH2 165 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 BEX5Q5H9J7 111 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 SLC35E4Q6ICL7 350 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 LPCAT3Q6P1A2 487 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 ADAD2Q8NCV1 583 aaKnown RBP4.73□□□□□ -1.65
CHKA-208ENST00000533910 OR2AK2Q8NG84 335 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 OR4A4PQ8NGN8 299 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 PLPPR1Q8TBJ4 325 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 NEK7Q8TDX7 302 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 CA5BP1Q8WTZ4 195 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 ITLN2Q8WWU7 325 aaPredicted RBP4.73□□□□□ -1.65
CHKA-208ENST00000533910 COQ2Q96H96 371 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 ZNF479Q96JC4 524 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 RITA1Q96K30 269 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 BBC3Q96PG8 261 aaPredicted RBP4.73□□□□□ -1.65
CHKA-208ENST00000533910 OR2A7Q96R45 310 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 ZNF2Q9BSG1 426 aaPredicted RBP4.73□□□□□ -1.65
CHKA-208ENST00000533910 RTBDNQ9BSG5 229 aaPredicted RBP4.73□□□□□ -1.65
CHKA-208ENST00000533910 ZNF747Q9BV97 191 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 ZNF436Q9C0F3 470 aaPredicted RBP4.73□□□□□ -1.65
CHKA-208ENST00000533910 KCNJ16Q9NPI9 418 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 PIPOXQ9P0Z9 390 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 SHPKQ9UHJ6 478 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 GLS2Q9UI32 602 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 RNF115Q9Y4L5 304 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 WIPI2Q9Y4P8 454 aa4.73□□□□□ -1.65
CHKA-208ENST00000533910 PKDREJQ9NTG1 2253 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 ICE1Q9Y2F5 2266 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 HRNRQ86YZ3 2850 aaPredicted RBP4.72□□□□□ -1.65
CHKA-208ENST00000533910 ROS1P08922 2347 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 IGKV1D-17A0A075B6S4 117 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 TRBV6-7A0A0A0MS04 114 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 TMEM30CPA0ZSE6 113 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 C9orf170A2RU37 121 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 BTBD17A6NE02 478 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 C5orf52A6NGY3 159 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 TUBAL3A6NHL2 446 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 RFPL4AA6NLU0 287 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 RFPL4AL1F8VTS6 287 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 ATP6V1G1O75348 118 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 SFT2D2O95562 160 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 DUS4LO95620 317 aaKnown RBP4.72□□□□□ -1.65
CHKA-208ENST00000533910 PPYP01298 95 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 SCTP09683 121 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 PSG2P11465 335 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 RPA2P15927 270 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 GNLYP22749 145 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 AADACP22760 399 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 CD34P28906 385 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 ERP29P30040 261 aaKnown RBP4.72□□□□□ -1.65
CHKA-208ENST00000533910 FCGR2CP31995 323 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 CEBPDP49716 269 aaPredicted RBP4.72□□□□□ -1.65
CHKA-208ENST00000533910 H2BFSP57053 126 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 SRSF4Q08170 494 aaKnown RBP4.72□□□□□ -1.65
CHKA-208ENST00000533910 BAMBIQ13145 260 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 ATXN7L3Q14CW9 347 aaPredicted RBP4.72□□□□□ -1.65
CHKA-208ENST00000533910 C2orf68Q2NKX9 166 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 LY6G6FQ5SQ64 297 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 TEX36Q5VZQ5 186 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 STUMQ69YW2 141 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 NOXA1Q86UR1 476 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 H1FOOQ8IZA3 346 aaPredicted RBP4.72□□□□□ -1.65
CHKA-208ENST00000533910 SLC38A6Q8IZM9 456 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 C12orf45Q8N5I9 185 aaPredicted RBP4.72□□□□□ -1.65
CHKA-208ENST00000533910 CD177Q8N6Q3 437 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 OR5M8Q8NGP6 311 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 OR11L1Q8NGX0 322 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 LINC01560Q8TB33 94 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 NEUROG1Q92886 237 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 PIK3IP1Q96FE7 263 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 SDSLQ96GA7 329 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 ZNF486Q96H40 463 aaPredicted RBP4.72□□□□□ -1.65
CHKA-208ENST00000533910 SHARPINQ9H0F6 387 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 KLK15Q9H2R5 256 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 HRH4Q9H3N8 390 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 RNF7Q9UBF6 113 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 OR14J1Q9UGF5 321 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 OPN4Q9UHM6 478 aa4.72□□□□□ -1.65
CHKA-208ENST00000533910 C14orf166Q9Y224 244 aaKnown RBP4.72□□□□□ -1.65
CHKA-208ENST00000533910 SPTBN1Q01082 2364 aaKnown RBP4.71□□□□□ -1.65
CHKA-208ENST00000533910 ZFYVE26Q68DK2 2539 aa4.71□□□□□ -1.66
CHKA-208ENST00000533910 CRYM-AS1A6NIL9 109 aa4.71□□□□□ -1.66
CHKA-208ENST00000533910 GOSR2O14653 212 aa4.71□□□□□ -1.66
CHKA-208ENST00000533910 KCNAB3O43448 404 aa4.71□□□□□ -1.66
CHKA-208ENST00000533910 RGS11O94810 467 aa4.71□□□□□ -1.66
CHKA-208ENST00000533910 CLDN14O95500 239 aa4.71□□□□□ -1.66
CHKA-208ENST00000533910 TFF1P04155 84 aa4.71□□□□□ -1.66
CHKA-208ENST00000533910 STAG3L2P0CL84 134 aa4.71□□□□□ -1.66
CHKA-208ENST00000533910 ZNF728P0DKX0 622 aa4.71□□□□□ -1.66
CHKA-208ENST00000533910 PGAM2P15259 253 aa4.71□□□□□ -1.66
CHKA-208ENST00000533910 MUC1P15941 1255 aaPredicted RBP4.71□□□□□ -1.66
CHKA-208ENST00000533910 AKR1C4P17516 323 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms