RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, human

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIF3A-215	ENST00000533145	SMAD7	O15105	426 aa	Known RBP	11.44	□□□□□ -0.58
HIF3A-215	ENST00000533145	MPPED1	O15442	326 aa		11.44	□□□□□ -0.58
HIF3A-215	ENST00000533145	CD5L	O43866	347 aa		11.44	□□□□□ -0.58
HIF3A-215	ENST00000533145	PRAF2	O60831	178 aa		11.44	□□□□□ -0.58
HIF3A-215	ENST00000533145	AVP	P01185	164 aa		11.44	□□□□□ -0.58
HIF3A-215	ENST00000533145	ARG1	P05089	322 aa		11.44	□□□□□ -0.58
HIF3A-215	ENST00000533145	SAA2	P0DJI9	122 aa	Predicted RBP	11.44	□□□□□ -0.58
HIF3A-215	ENST00000533145	PI3	P19957	117 aa		11.44	□□□□□ -0.58
HIF3A-215	ENST00000533145	HTR1D	P28221	377 aa		11.44	□□□□□ -0.58
HIF3A-215	ENST00000533145	PIGP	P57054	158 aa		11.44	□□□□□ -0.58
HIF3A-215	ENST00000533145	BPIFB3	P59826	476 aa		11.44	□□□□□ -0.58
HIF3A-215	ENST00000533145	KRTAP1-1	Q07627	177 aa		11.44	□□□□□ -0.58
HIF3A-215	ENST00000533145	ABCA11P	Q4W5N1	156 aa		11.44	□□□□□ -0.58
HIF3A-215	ENST00000533145	MIDN	Q504T8	468 aa		11.44	□□□□□ -0.58
HIF3A-215	ENST00000533145	ADAD2	Q8NCV1	583 aa	Known RBP	11.44	□□□□□ -0.58
HIF3A-215	ENST00000533145	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	11.44	□□□□□ -0.58
HIF3A-215	ENST00000533145	GALNT14	Q96FL9	552 aa		11.44	□□□□□ -0.58
HIF3A-215	ENST00000533145	HSD17B10	Q99714	261 aa	Known RBP	11.44	□□□□□ -0.58
HIF3A-215	ENST00000533145	ZNRD1	Q9P1U0	126 aa		11.44	□□□□□ -0.58
HIF3A-215	ENST00000533145	DPM3	Q9P2X0	92 aa		11.44	□□□□□ -0.58
HIF3A-215	ENST00000533145	KCNS2	Q9ULS6	477 aa		11.44	□□□□□ -0.58
HIF3A-215	ENST00000533145	CRYM-AS1	A6NIL9	109 aa		11.43	□□□□□ -0.58
HIF3A-215	ENST00000533145	LEUTX	A8MZ59	168 aa		11.43	□□□□□ -0.58
HIF3A-215	ENST00000533145	OOSP1	A8MZH6	123 aa		11.43	□□□□□ -0.58
HIF3A-215	ENST00000533145	B3GALNT1	O75752	331 aa		11.43	□□□□□ -0.58
HIF3A-215	ENST00000533145	OR4E1	P0C645	316 aa		11.43	□□□□□ -0.58
HIF3A-215	ENST00000533145	VSIG10L2	P0DP72	767 aa		11.43	□□□□□ -0.58
HIF3A-215	ENST00000533145	ZNF16	P17020	682 aa	Predicted RBP	11.43	□□□□□ -0.58
HIF3A-215	ENST00000533145	ANXA7	P20073	488 aa	Known RBP	11.43	□□□□□ -0.58
HIF3A-215	ENST00000533145	DUT	P33316	252 aa	Known RBP	11.43	□□□□□ -0.58
HIF3A-215	ENST00000533145	SUPT4H1	P63272	117 aa	Known RBP	11.43	□□□□□ -0.58
HIF3A-215	ENST00000533145	PRB3	Q04118	309 aa	Predicted RBP	11.43	□□□□□ -0.58
HIF3A-215	ENST00000533145	ZNF816	Q0VGE8	651 aa	Predicted RBP	11.43	□□□□□ -0.58
HIF3A-215	ENST00000533145	PHLDA2	Q53GA4	152 aa		11.43	□□□□□ -0.58
HIF3A-215	ENST00000533145	GLDN	Q6ZMI3	551 aa	Predicted RBP	11.43	□□□□□ -0.58
HIF3A-215	ENST00000533145	TMED4	Q7Z7H5	227 aa		11.43	□□□□□ -0.58
HIF3A-215	ENST00000533145	SGPP2	Q8IWX5	399 aa		11.43	□□□□□ -0.58
HIF3A-215	ENST00000533145	TCTEX1D1	Q8N7M0	179 aa		11.43	□□□□□ -0.58
HIF3A-215	ENST00000533145	ADTRP	Q96IZ2	230 aa		11.43	□□□□□ -0.58
HIF3A-215	ENST00000533145	C18orf12	Q96KH6	178 aa		11.43	□□□□□ -0.58
HIF3A-215	ENST00000533145	FAM212B	Q9NTI7	297 aa	Predicted RBP	11.43	□□□□□ -0.58
HIF3A-215	ENST00000533145	KCNIP3	Q9Y2W7	256 aa		11.43	□□□□□ -0.58
HIF3A-215	ENST00000533145	OTOG	Q6ZRI0	2925 aa		11.43	□□□□□ -0.58
HIF3A-215	ENST00000533145	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.43	□□□□□ -0.58
HIF3A-215	ENST00000533145	IGHV1-69D	A0A0B4J2H0	117 aa		11.42	□□□□□ -0.58
HIF3A-215	ENST00000533145	RNF212B	A8MTL3	300 aa		11.42	□□□□□ -0.58
HIF3A-215	ENST00000533145	TXNL1	O43396	289 aa		11.42	□□□□□ -0.58
HIF3A-215	ENST00000533145	FSHB	P01225	129 aa		11.42	□□□□□ -0.58
HIF3A-215	ENST00000533145	IGHV1-69	P01742	117 aa		11.42	□□□□□ -0.58
HIF3A-215	ENST00000533145	GAPDH	P04406	335 aa	Known RBP	11.42	□□□□□ -0.58
HIF3A-215	ENST00000533145	FOSL1	P15407	271 aa		11.42	□□□□□ -0.58
HIF3A-215	ENST00000533145	AKR1C4	P17516	323 aa		11.42	□□□□□ -0.58
HIF3A-215	ENST00000533145	F2R	P25116	425 aa		11.42	□□□□□ -0.58
HIF3A-215	ENST00000533145	CEACAM3	P40198	252 aa		11.42	□□□□□ -0.58
HIF3A-215	ENST00000533145	LGALS4	P56470	323 aa		11.42	□□□□□ -0.58
HIF3A-215	ENST00000533145	TAGLN	Q01995	201 aa	Known RBP	11.42	□□□□□ -0.58
HIF3A-215	ENST00000533145	RPL39P5	Q59GN2	51 aa		11.42	□□□□□ -0.58
HIF3A-215	ENST00000533145	LDLRAD2	Q5SZI1	272 aa		11.42	□□□□□ -0.58
HIF3A-215	ENST00000533145	C11orf88	Q6PI97	169 aa		11.42	□□□□□ -0.58
HIF3A-215	ENST00000533145	TBC1D26	Q86UD7	250 aa		11.42	□□□□□ -0.58
HIF3A-215	ENST00000533145	TEX29	Q8N6K0	151 aa		11.42	□□□□□ -0.58
HIF3A-215	ENST00000533145	CAPSL	Q8WWF8	208 aa		11.42	□□□□□ -0.58
HIF3A-215	ENST00000533145	MALSU1	Q96EH3	234 aa		11.42	□□□□□ -0.58
HIF3A-215	ENST00000533145	AJUBA	Q96IF1	538 aa		11.42	□□□□□ -0.58
HIF3A-215	ENST00000533145	NAA60	Q9H7X0	242 aa		11.42	□□□□□ -0.58
HIF3A-215	ENST00000533145	MAP1A	P78559	2803 aa	Predicted RBP	11.41	□□□□□ -0.58
HIF3A-215	ENST00000533145	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	11.41	□□□□□ -0.58
HIF3A-215	ENST00000533145	C9orf170	A2RU37	121 aa		11.41	□□□□□ -0.58
HIF3A-215	ENST00000533145	C7orf66	A4D0T2	115 aa		11.41	□□□□□ -0.58
HIF3A-215	ENST00000533145	SNRPGP15	A8MWD9	76 aa		11.41	□□□□□ -0.58
HIF3A-215	ENST00000533145		M0R1X1	148 aa		11.41	□□□□□ -0.58
HIF3A-215	ENST00000533145	NPFF	O15130	113 aa		11.41	□□□□□ -0.58
HIF3A-215	ENST00000533145	SFT2D2	O95562	160 aa		11.41	□□□□□ -0.58
HIF3A-215	ENST00000533145	CT45A6	P0DMU7	189 aa		11.41	□□□□□ -0.58
HIF3A-215	ENST00000533145	CT45A5	P0DMU8	189 aa		11.41	□□□□□ -0.58
HIF3A-215	ENST00000533145	CT45A7	P0DMV0	189 aa		11.41	□□□□□ -0.58
HIF3A-215	ENST00000533145	EPHA1	P21709	976 aa		11.41	□□□□□ -0.58
HIF3A-215	ENST00000533145	THBS3	P49746	956 aa		11.41	□□□□□ -0.58
HIF3A-215	ENST00000533145	RAB25	P57735	213 aa		11.41	□□□□□ -0.58
HIF3A-215	ENST00000533145	RPL30	P62888	115 aa	Known RBP	11.41	□□□□□ -0.58
HIF3A-215	ENST00000533145	CATR1	Q13166	79 aa		11.41	□□□□□ -0.58
HIF3A-215	ENST00000533145	PPP1R1A	Q13522	171 aa		11.41	□□□□□ -0.58
HIF3A-215	ENST00000533145	KLF17	Q5JT82	389 aa	Predicted RBP	11.41	□□□□□ -0.58
HIF3A-215	ENST00000533145	TPTE2P1	Q5T6R2	138 aa		11.41	□□□□□ -0.58
HIF3A-215	ENST00000533145	GPR157	Q5UAW9	335 aa		11.41	□□□□□ -0.58
HIF3A-215	ENST00000533145	LYG2	Q86SG7	212 aa		11.41	□□□□□ -0.58
HIF3A-215	ENST00000533145	DDB2	Q92466	427 aa		11.41	□□□□□ -0.58
HIF3A-215	ENST00000533145	TMUB1	Q9BVT8	246 aa		11.41	□□□□□ -0.58
HIF3A-215	ENST00000533145	TRAV40	A0A0B4J280	105 aa		11.4	□□□□□ -0.58
HIF3A-215	ENST00000533145		A0A0B4J293	547 aa		11.4	□□□□□ -0.58
HIF3A-215	ENST00000533145	C3orf85	A0A1B0GTC6	90 aa		11.4	□□□□□ -0.58
HIF3A-215	ENST00000533145	LINC00473	A8K010	186 aa		11.4	□□□□□ -0.58
HIF3A-215	ENST00000533145		H0Y980	276 aa		11.4	□□□□□ -0.58
HIF3A-215	ENST00000533145	TNFSF12	O43508	249 aa		11.4	□□□□□ -0.58
HIF3A-215	ENST00000533145	DUS4L	O95620	317 aa	Known RBP	11.4	□□□□□ -0.58
HIF3A-215	ENST00000533145	DHRS2	Q13268	280 aa		11.4	□□□□□ -0.58
HIF3A-215	ENST00000533145	DIAPH2-AS1	Q14236	149 aa		11.4	□□□□□ -0.58
HIF3A-215	ENST00000533145	TATDN3	Q17R31	274 aa		11.4	□□□□□ -0.58
HIF3A-215	ENST00000533145	LHFPL4	Q7Z7J7	247 aa		11.4	□□□□□ -0.58
HIF3A-215	ENST00000533145	TGIF2LX	Q8IUE1	241 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms