RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 PRSS8Q16651 343 aa12.51□□□□□ -0.41
CAPN1-224ENST00000533129 OR1K1Q8NGR3 316 aa12.51□□□□□ -0.41
CAPN1-224ENST00000533129 PSMF1Q92530 271 aa12.51□□□□□ -0.41
CAPN1-224ENST00000533129 SH2D2AQ9NP31 389 aa12.51□□□□□ -0.41
CAPN1-224ENST00000533129 TNRC6AQ8NDV7 1962 aaKnown RBP12.51□□□□□ -0.41
CAPN1-224ENST00000533129 G3V3Y1 287 aa12.5□□□□□ -0.41
CAPN1-224ENST00000533129 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.5□□□□□ -0.41
CAPN1-224ENST00000533129 CBR3O75828 277 aa12.5□□□□□ -0.41
CAPN1-224ENST00000533129 SFTPCP11686 197 aa12.5□□□□□ -0.41
CAPN1-224ENST00000533129 IL3RAP26951 378 aa12.5□□□□□ -0.41
CAPN1-224ENST00000533129 MLNRO43193 412 aa12.5□□□□□ -0.41
CAPN1-224ENST00000533129 ZNF25P17030 456 aaPredicted RBP12.5□□□□□ -0.41
CAPN1-224ENST00000533129 ATP6V1FQ16864 119 aa12.5□□□□□ -0.41
CAPN1-224ENST00000533129 ZNF585BQ52M93 769 aa12.5□□□□□ -0.41
CAPN1-224ENST00000533129 TMEM144Q7Z5S9 345 aa12.5□□□□□ -0.41
CAPN1-224ENST00000533129 CPEB3Q8NE35 698 aaKnown RBP12.5□□□□□ -0.41
CAPN1-224ENST00000533129 OR10G9Q8NGN4 311 aa12.5□□□□□ -0.41
CAPN1-224ENST00000533129 OR10G7Q8NGN6 311 aa12.5□□□□□ -0.41
CAPN1-224ENST00000533129 TTC28Q96AY4 2481 aa12.5□□□□□ -0.41
CAPN1-224ENST00000533129 TMEM238LA0A1B0GVL6 79 aa12.49□□□□□ -0.41
CAPN1-224ENST00000533129 HMGB3O15347 200 aaKnown RBP12.49□□□□□ -0.41
CAPN1-224ENST00000533129 CARD18P57730 90 aa12.49□□□□□ -0.41
CAPN1-224ENST00000533129 B3GALT5-AS1P59052 145 aa12.49□□□□□ -0.41
CAPN1-224ENST00000533129 TLE1Q04724 770 aa12.49□□□□□ -0.41
CAPN1-224ENST00000533129 C16orf54Q6UWD8 224 aa12.49□□□□□ -0.41
CAPN1-224ENST00000533129 GATAD1Q8WUU5 269 aa12.49□□□□□ -0.41
CAPN1-224ENST00000533129 MARCH11A6NNE9 402 aa12.49□□□□□ -0.41
CAPN1-224ENST00000533129 CRYABP02511 175 aaKnown RBP12.49□□□□□ -0.41
CAPN1-224ENST00000533129 PPP1CBP62140 327 aa12.49□□□□□ -0.41
CAPN1-224ENST00000533129 OR8G2PQ6IF36 304 aa12.49□□□□□ -0.41
CAPN1-224ENST00000533129 BTNL3Q6UXE8 466 aa12.49□□□□□ -0.41
CAPN1-224ENST00000533129 GGNQ86UU5 652 aa12.49□□□□□ -0.41
CAPN1-224ENST00000533129 KCNE4Q8WWG9 221 aa12.49□□□□□ -0.41
CAPN1-224ENST00000533129 TMEM147Q9BVK8 224 aa12.49□□□□□ -0.41
CAPN1-224ENST00000533129 CRIM1Q9NZV1 1036 aa12.49□□□□□ -0.41
CAPN1-224ENST00000533129 TRAPPC1Q9Y5R8 145 aa12.49□□□□□ -0.41
CAPN1-224ENST00000533129 PXMP4Q9Y6I8 212 aa12.49□□□□□ -0.41
CAPN1-224ENST00000533129 GAGE1Q13065 139 aa12.48□□□□□ -0.41
CAPN1-224ENST00000533129 NRN1LQ496H8 165 aa12.48□□□□□ -0.41
CAPN1-224ENST00000533129 FAM78BQ5VT40 261 aa12.48□□□□□ -0.41
CAPN1-224ENST00000533129 WDYHV1Q96HA8 205 aa12.48□□□□□ -0.41
CAPN1-224ENST00000533129 MS4A10Q96PG2 267 aa12.48□□□□□ -0.41
CAPN1-224ENST00000533129 OR1A1Q9P1Q5 309 aa12.48□□□□□ -0.41
CAPN1-224ENST00000533129 TRAV24A0A0B4J272 114 aa12.48□□□□□ -0.41
CAPN1-224ENST00000533129 SYNGR1O43759 233 aa12.48□□□□□ -0.41
CAPN1-224ENST00000533129 CLDN1O95832 211 aa12.48□□□□□ -0.41
CAPN1-224ENST00000533129 SERPINA7P05543 415 aa12.48□□□□□ -0.41
CAPN1-224ENST00000533129 COX5AP20674 150 aa12.48□□□□□ -0.41
CAPN1-224ENST00000533129 ZNF573Q86YE8 665 aa12.48□□□□□ -0.41
CAPN1-224ENST00000533129 PPP1R3CQ9UQK1 317 aa12.48□□□□□ -0.41
CAPN1-224ENST00000533129 ZNF318Q5VUA4 2279 aa12.48□□□□□ -0.41
CAPN1-224ENST00000533129 TMPRSS2O15393 492 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 DLEU1O43261 78 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 PAGE4O60829 102 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 RPLP1P05386 114 aaKnown RBP12.47□□□□□ -0.41
CAPN1-224ENST00000533129 UBE2NP61088 152 aaKnown RBP12.47□□□□□ -0.41
CAPN1-224ENST00000533129 TCF15Q12870 199 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 MRPL21Q7Z2W9 205 aaKnown RBP12.47□□□□□ -0.41
CAPN1-224ENST00000533129 LINC01551Q86U37 167 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 OR5A2Q8NGI9 324 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 IL1F10Q8WWZ1 152 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 ZCCHC14Q8WYQ9 949 aaKnown RBP12.47□□□□□ -0.41
CAPN1-224ENST00000533129 SGCZQ96LD1 299 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 WFIKKN1Q96NZ8 548 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 WDR87Q6ZQQ6 2873 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 HS3ST1O14792 307 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 LILRA1O75019 489 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 TNFSF15O95150 251 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 CHRNA7P36544 502 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 Q0VFX4 171 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 FOXL1Q12952 345 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 FFAR4Q5NUL3 377 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 RDH5Q92781 318 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 HSPB7Q9UBY9 170 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 A0A0U1RQK1 487 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 ZNF320A2RRD8 509 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 IFNL4K9M1U5 179 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 CXCL13O43927 109 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 SRD5A2P31213 254 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 OR3A1P47881 315 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 MOB1BQ7L9L4 216 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 TMEM256Q8N2U0 113 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 THOC3Q96J01 351 aaKnown RBP12.47□□□□□ -0.41
CAPN1-224ENST00000533129 TMEM208Q9BTX3 173 aa12.47□□□□□ -0.41
CAPN1-224ENST00000533129 C11orf94C9JXX5 98 aa12.46□□□□□ -0.41
CAPN1-224ENST00000533129 HPRT1P00492 218 aa12.46□□□□□ -0.41
CAPN1-224ENST00000533129 NPPCP23582 126 aa12.46□□□□□ -0.41
CAPN1-224ENST00000533129 RPL29P47914 159 aaKnown RBP12.46□□□□□ -0.41
CAPN1-224ENST00000533129 DEFB124Q8NES8 71 aa12.46□□□□□ -0.41
CAPN1-224ENST00000533129 TBX15Q96SF7 602 aa12.46□□□□□ -0.41
CAPN1-224ENST00000533129 C20orf144Q9BQM9 153 aa12.46□□□□□ -0.41
CAPN1-224ENST00000533129 DLL3Q9NYJ7 618 aa12.46□□□□□ -0.41
CAPN1-224ENST00000533129 GOLT1BQ9Y3E0 138 aa12.46□□□□□ -0.41
CAPN1-224ENST00000533129 SDK2Q58EX2 2172 aa12.46□□□□□ -0.42
CAPN1-224ENST00000533129 C1QTNF9BB2RNN3 333 aa12.46□□□□□ -0.42
CAPN1-224ENST00000533129 PDE6DO43924 150 aa12.46□□□□□ -0.42
CAPN1-224ENST00000533129 SOX15O60248 233 aa12.46□□□□□ -0.42
CAPN1-224ENST00000533129 CYB5R2Q6BCY4 276 aa12.46□□□□□ -0.42
CAPN1-224ENST00000533129 FGFRL1Q8N441 504 aa12.46□□□□□ -0.42
CAPN1-224ENST00000533129 PRSS33Q8NF86 280 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms