RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 MFFQ9GZY8 342 aa15.25■□□□□ 0.03
SMPD1-208ENST00000533123 PATZ1Q9HBE1 687 aaKnown RBP15.25■□□□□ 0.03
SMPD1-208ENST00000533123 KCNS2Q9ULS6 477 aa15.25■□□□□ 0.03
SMPD1-208ENST00000533123 PDZD2O15018 2839 aa15.25■□□□□ 0.03
SMPD1-208ENST00000533123 IGHV4-30-2A0A087WSY4 118 aa15.24■□□□□ 0.03
SMPD1-208ENST00000533123 IGHV3-43A0A0B4J1X8 118 aa15.24■□□□□ 0.03
SMPD1-208ENST00000533123 C15orf65H3BRN8 121 aa15.24■□□□□ 0.03
SMPD1-208ENST00000533123 IGHV3-43DP0DP04 118 aa15.24■□□□□ 0.03
SMPD1-208ENST00000533123 LRTM2Q8N967 370 aa15.24■□□□□ 0.03
SMPD1-208ENST00000533123 OR8B3Q8NGG8 313 aa15.24■□□□□ 0.03
SMPD1-208ENST00000533123 LURAP1Q96LR2 239 aa15.24■□□□□ 0.03
SMPD1-208ENST00000533123 OR8B2Q96RD0 313 aa15.24■□□□□ 0.03
SMPD1-208ENST00000533123 ARL6Q9H0F7 186 aa15.24■□□□□ 0.03
SMPD1-208ENST00000533123 TMEM222Q9H0R3 208 aa15.24■□□□□ 0.03
SMPD1-208ENST00000533123 RBM7Q9Y580 266 aaKnown RBP15.24■□□□□ 0.03
SMPD1-208ENST00000533123 SLC25A4P12235 298 aa15.24■□□□□ 0.03
SMPD1-208ENST00000533123 PPP1CCP36873 323 aaKnown RBP15.24■□□□□ 0.03
SMPD1-208ENST00000533123 LTC4SQ16873 150 aa15.24■□□□□ 0.03
SMPD1-208ENST00000533123 LGI3Q8N145 548 aa15.24■□□□□ 0.03
SMPD1-208ENST00000533123 OR1S1Q8NH92 325 aa15.24■□□□□ 0.03
SMPD1-208ENST00000533123 CLN8Q9UBY8 286 aa15.24■□□□□ 0.03
SMPD1-208ENST00000533123 ARHGAP32A7KAX9 2087 aa15.24■□□□□ 0.03
SMPD1-208ENST00000533123 H0YIZ8 118 aa15.23■□□□□ 0.03
SMPD1-208ENST00000533123 TEX46H3BTG2 121 aa15.23■□□□□ 0.03
SMPD1-208ENST00000533123 NDUFS8O00217 210 aa15.23■□□□□ 0.03
SMPD1-208ENST00000533123 RPA2P15927 270 aa15.23■□□□□ 0.03
SMPD1-208ENST00000533123 CYCSP99999 105 aaKnown RBP15.23■□□□□ 0.03
SMPD1-208ENST00000533123 CLEC12BQ2HXU8 276 aa15.23■□□□□ 0.03
SMPD1-208ENST00000533123 TMEM268Q5VZI3 342 aa15.23■□□□□ 0.03
SMPD1-208ENST00000533123 HSD17B13Q7Z5P4 300 aaPredicted RBP15.23■□□□□ 0.03
SMPD1-208ENST00000533123 SLC35G3Q8N808 338 aa15.23■□□□□ 0.03
SMPD1-208ENST00000533123 OR51H1Q8NH63 302 aa15.23■□□□□ 0.03
SMPD1-208ENST00000533123 THAP6Q8TBB0 222 aa15.23■□□□□ 0.03
SMPD1-208ENST00000533123 ZC4H2Q9NQZ6 224 aa15.23■□□□□ 0.03
SMPD1-208ENST00000533123 C19orf12Q9NSK7 152 aa15.23■□□□□ 0.03
SMPD1-208ENST00000533123 TNFSF18Q9UNG2 199 aa15.23■□□□□ 0.03
SMPD1-208ENST00000533123 UBE2J1Q9Y385 318 aaPredicted RBP15.23■□□□□ 0.03
SMPD1-208ENST00000533123 IFNA21P01568 189 aa15.23■□□□□ 0.03
SMPD1-208ENST00000533123 RPL31P62899 125 aaKnown RBP15.23■□□□□ 0.03
SMPD1-208ENST00000533123 IL15RAQ13261 267 aa15.23■□□□□ 0.03
SMPD1-208ENST00000533123 RAB32Q13637 225 aa15.23■□□□□ 0.03
SMPD1-208ENST00000533123 CLDND2Q8NHS1 167 aa15.23■□□□□ 0.03
SMPD1-208ENST00000533123 RNF126Q9BV68 326 aa15.23■□□□□ 0.03
SMPD1-208ENST00000533123 OR2S2Q9NQN1 319 aa15.23■□□□□ 0.03
SMPD1-208ENST00000533123 NOTCH2Q04721 2471 aa15.22■□□□□ 0.03
SMPD1-208ENST00000533123 VWC2LB2RUY7 222 aa15.22■□□□□ 0.03
SMPD1-208ENST00000533123 WDR25Q64LD2 544 aaPredicted RBP15.22■□□□□ 0.03
SMPD1-208ENST00000533123 EIF4E3Q8N5X7 224 aaKnown RBP15.22■□□□□ 0.03
SMPD1-208ENST00000533123 OR5AC2Q9NZP5 309 aa15.22■□□□□ 0.03
SMPD1-208ENST00000533123 RNF150Q9ULK6 438 aa15.22■□□□□ 0.03
SMPD1-208ENST00000533123 S100A10P60903 97 aa15.21■□□□□ 0.03
SMPD1-208ENST00000533123 TCF23Q7RTU1 214 aa15.21■□□□□ 0.03
SMPD1-208ENST00000533123 FOXRED2Q8IWF2 684 aa15.21■□□□□ 0.03
SMPD1-208ENST00000533123 MBD6Q96DN6 1003 aa15.21■□□□□ 0.03
SMPD1-208ENST00000533123 OR6C3Q9NZP0 311 aa15.21■□□□□ 0.03
SMPD1-208ENST00000533123 FLNBO75369 2602 aaKnown RBP15.21■□□□□ 0.03
SMPD1-208ENST00000533123 YLPM1P49750 1951 aaKnown RBP15.21■□□□□ 0.03
SMPD1-208ENST00000533123 RNF222A6NCQ9 220 aa15.21■□□□□ 0.03
SMPD1-208ENST00000533123 F5H0A9 414 aaPredicted RBP15.21■□□□□ 0.03
SMPD1-208ENST00000533123 NUPL2O15504 423 aaKnown RBP15.21■□□□□ 0.03
SMPD1-208ENST00000533123 SPINT2O43291 252 aa15.21■□□□□ 0.03
SMPD1-208ENST00000533123 IGHV2-5P01817 119 aa15.21■□□□□ 0.03
SMPD1-208ENST00000533123 F2RP25116 425 aa15.21■□□□□ 0.03
SMPD1-208ENST00000533123 DSCR9P59020 149 aa15.21■□□□□ 0.03
SMPD1-208ENST00000533123 GNB2P62879 340 aa15.21■□□□□ 0.03
SMPD1-208ENST00000533123 PDZD9Q8IXQ8 264 aa15.21■□□□□ 0.03
SMPD1-208ENST00000533123 LRRC75A-AS1Q8N1F1 130 aa15.21■□□□□ 0.03
SMPD1-208ENST00000533123 DRAM1Q8N682 238 aa15.21■□□□□ 0.03
SMPD1-208ENST00000533123 NINJ1Q92982 152 aa15.21■□□□□ 0.03
SMPD1-208ENST00000533123 C5orf30Q96GV9 206 aa15.21■□□□□ 0.03
SMPD1-208ENST00000533123 TRGV10A0A0A0MS01 117 aa15.2■□□□□ 0.02
SMPD1-208ENST00000533123 IGHV4-61A0A0C4DH41 118 aa15.2■□□□□ 0.02
SMPD1-208ENST00000533123 H0Y980 276 aa15.2■□□□□ 0.02
SMPD1-208ENST00000533123 OMGP23515 440 aa15.2■□□□□ 0.02
SMPD1-208ENST00000533123 LMO4P61968 165 aa15.2■□□□□ 0.02
SMPD1-208ENST00000533123 TMEM200BQ69YZ2 307 aa15.2■□□□□ 0.02
SMPD1-208ENST00000533123 DCUN1D4Q92564 292 aa15.2■□□□□ 0.02
SMPD1-208ENST00000533123 SSBP3Q9BWW4 388 aaPredicted RBP15.2■□□□□ 0.02
SMPD1-208ENST00000533123 OR2D2Q9H210 308 aa15.2■□□□□ 0.02
SMPD1-208ENST00000533123 NCOR1P1Q9H4R4 102 aa15.2■□□□□ 0.02
SMPD1-208ENST00000533123 hADV38S2A0JD32 116 aa15.2■□□□□ 0.02
SMPD1-208ENST00000533123 GZMHP20718 246 aa15.2■□□□□ 0.02
SMPD1-208ENST00000533123 UCP1P25874 307 aa15.2■□□□□ 0.02
SMPD1-208ENST00000533123 CR1LQ2VPA4 569 aa15.2■□□□□ 0.02
SMPD1-208ENST00000533123 TRAT1Q6PIZ9 186 aa15.2■□□□□ 0.02
SMPD1-208ENST00000533123 ZNF695Q8IW36 515 aa15.2■□□□□ 0.02
SMPD1-208ENST00000533123 SELENOHQ8IZQ5 122 aaKnown RBP15.2■□□□□ 0.02
SMPD1-208ENST00000533123 TMEM56Q96MV1 263 aa15.2■□□□□ 0.02
SMPD1-208ENST00000533123 TMEM56-RWDD3S4R434 201 aa15.2■□□□□ 0.02
SMPD1-208ENST00000533123 CDS2O95674 445 aa15.19■□□□□ 0.02
SMPD1-208ENST00000533123 S100GP29377 79 aa15.19■□□□□ 0.02
SMPD1-208ENST00000533123 SRPXP78539 464 aa15.19■□□□□ 0.02
SMPD1-208ENST00000533123 OR52M1Q8NGK5 317 aa15.19■□□□□ 0.02
SMPD1-208ENST00000533123 RRNAD1Q96FB5 475 aaKnown RBP15.19■□□□□ 0.02
SMPD1-208ENST00000533123 PRRC2AP48634 2157 aaKnown RBP15.19■□□□□ 0.02
SMPD1-208ENST00000533123 WNK2Q9Y3S1 2297 aa15.19■□□□□ 0.02
SMPD1-208ENST00000533123 SVEP1Q4LDE5 3571 aa15.19■□□□□ 0.02
SMPD1-208ENST00000533123 SCGB1D2O95969 90 aa15.19■□□□□ 0.02
SMPD1-208ENST00000533123 MEF2CQ06413 473 aaPredicted RBP15.19■□□□□ 0.02
SMPD1-208ENST00000533123 Q5PR19 223 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms