RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 KMT5CQ86Y97 462 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 C1orf174Q8IYL3 243 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 LYG1Q8N1E2 194 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 PAQR4Q8N4S7 273 aaPredicted RBP5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 OR10G4Q8NGN3 311 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 OR10G9Q8NGN4 311 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 OR10G7Q8NGN6 311 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 FER1L6-AS2Q96M78 137 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 ZNF48Q96MX3 618 aaPredicted RBP5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 RSG1Q9BU20 258 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 HES7Q9BYE0 225 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 CDH20Q9HBT6 801 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 GPR35Q9HC97 309 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 PILRAQ9UKJ1 303 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 FRYQ5TBA9 3013 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 IGHV1-69-2A0A0G2JMI3 117 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 H0YIG0 161 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 TRAPPC2LH3BP13 241 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 K7EP13 123 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 RBFOX2O43251 390 aaKnown RBP eCLIP5.87□□□□□ -1.475e-7■■■■□ 21.2
TGFBR3-209ENST00000532540 PDE6DO43924 150 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 S1PR2O95136 353 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 FABP2P12104 132 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 ACP1P24666 158 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 CKS1BP61024 79 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 FA2HQ7L5A8 372 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 ZAR1Q86SH2 424 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 OR8I2Q8N0Y5 310 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 PECRQ9BY49 303 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 RPRMQ9NS64 109 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 OR1A1Q9P1Q5 309 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 PCDH15Q96QU1 1955 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 IGHV2OR16-5A0A0B4J2B6 119 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 CTXND1A0A1B0GTU2 59 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 CRYM-AS1A6NIL9 109 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 ZNF891A8MT65 544 aaPredicted RBP5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 ATXN7O15265 892 aaPredicted RBP5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 CBLN1P23435 193 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 IL3RAP26951 378 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 PLA2G5P39877 138 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 RPL23P62829 140 aaKnown RBP5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 PAX2Q02962 417 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 EIF3IQ13347 325 aaKnown RBP5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 RAB35Q15286 201 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 C3AR1Q16581 482 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 LINC01551Q86U37 167 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 CNEP1R1Q8N9A8 125 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 OR51G1Q8NGK1 321 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 MMP25Q9NPA2 562 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 NRN1Q9NPD7 142 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 MCTS1Q9ULC4 181 aaKnown RBP5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 ICAM5Q9UMF0 924 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 ST3GAL6Q9Y274 331 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 SCN8AQ9UQD0 1980 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 MED13Q9UHV7 2174 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 CSPG4Q6UVK1 2322 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 LY6G6EA0A0G2JKS1 128 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 VENTXO95231 258 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 UTS2O95399 124 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 THY1P04216 161 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 VDAC1P21796 283 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 OR3A4PP47883 348 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 UQCRFS1P47985 274 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 SLC38A11Q08AI6 406 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 LY6DQ14210 128 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 COA6Q5JTJ3 125 aaKnown RBP5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 PLA2G2CQ5R387 149 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 C6orf201Q7Z4U5 140 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 ANKRD37Q7Z713 158 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 TMEM230Q96A57 120 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 TIMP4Q99727 224 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 WFDC1Q9HC57 220 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 U3KQA8 63 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 USF3Q68DE3 2245 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 CACNA1DQ01668 2161 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 C1QTNF9BB2RNN3 333 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 ZNF732B4DXR9 585 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 MT-ATP6P00846 226 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 C1QTNF9P0C862 333 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 NBL1P41271 181 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 PPOXP50336 477 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 DMRTC1Q5HYR2 192 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 OR52M1Q8NGK5 317 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 FAM131CQ96AQ9 280 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 RTBDNQ9BSG5 229 aaPredicted RBP5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 LYRM4Q9HD34 91 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 G6PC2Q9NQR9 355 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 OR51B2Q9Y5P1 312 aa5.86□□□□□ -1.47
TGFBR3-209ENST00000532540 CENPVL1A0A0U1RR11 272 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 LOC102725191A0A1B0GVB3 256 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 A0A1W2PNR3 127 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 CORTO00230 105 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 TSPOP30536 169 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 NPBWR2P48146 333 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 ACTL10Q5JWF8 245 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 RNF133Q8WVZ7 376 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 IL1F10Q8WWZ1 152 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 ADAT3Q96EY9 351 aaPredicted RBP5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 GTSF1LQ9H1H1 148 aa5.85□□□□□ -1.47
TGFBR3-209ENST00000532540 TXNIPQ9H3M7 391 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms