RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 PARP12Q9H0J9 701 aaKnown RBP10.13□□□□□ -0.79
COPB1-208ENST00000532088 MEGF9Q9H1U4 602 aa10.13□□□□□ -0.79
COPB1-208ENST00000532088 PRDM13Q9H4Q3 707 aa10.13□□□□□ -0.79
COPB1-208ENST00000532088 ZNF221Q9UK13 617 aa10.13□□□□□ -0.79
COPB1-208ENST00000532088 CSPG4Q6UVK1 2322 aa10.12□□□□□ -0.79
COPB1-208ENST00000532088 J3QRK9 145 aa10.12□□□□□ -0.79
COPB1-208ENST00000532088 OR8U9P0C7N5 309 aa10.12□□□□□ -0.79
COPB1-208ENST00000532088 SRP14P37108 136 aaKnown RBP10.12□□□□□ -0.79
COPB1-208ENST00000532088 ARHGDIBP52566 201 aa10.12□□□□□ -0.79
COPB1-208ENST00000532088 TPTE2P1Q5T6R2 138 aa10.12□□□□□ -0.79
COPB1-208ENST00000532088 AADACL3Q5VUY0 350 aa10.12□□□□□ -0.79
COPB1-208ENST00000532088 OR8H3Q8N146 312 aa10.12□□□□□ -0.79
COPB1-208ENST00000532088 LYG1Q8N1E2 194 aa10.12□□□□□ -0.79
COPB1-208ENST00000532088 OR8U1Q8NH10 309 aa10.12□□□□□ -0.79
COPB1-208ENST00000532088 RPEQ96AT9 228 aa10.12□□□□□ -0.79
COPB1-208ENST00000532088 ZNF486Q96H40 463 aaPredicted RBP10.12□□□□□ -0.79
COPB1-208ENST00000532088 AJUBAQ96IF1 538 aa10.12□□□□□ -0.79
COPB1-208ENST00000532088 SCGB3A2Q96PL1 93 aa10.12□□□□□ -0.79
COPB1-208ENST00000532088 S1PR3Q99500 378 aa10.12□□□□□ -0.79
COPB1-208ENST00000532088 SLC25A21Q9BQT8 299 aaPredicted RBP10.12□□□□□ -0.79
COPB1-208ENST00000532088 BEX2Q9BXY8 128 aa10.12□□□□□ -0.79
COPB1-208ENST00000532088 RBM7Q9Y580 266 aaKnown RBP10.12□□□□□ -0.79
COPB1-208ENST00000532088 MAP1AP78559 2803 aaPredicted RBP10.12□□□□□ -0.79
COPB1-208ENST00000532088 ACANP16112 2415 aa10.12□□□□□ -0.79
COPB1-208ENST00000532088 SAA2-SAA4A0A096LPE2 208 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 IGKV1D-13A0A0B4J2D9 117 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 HSD17B6O14756 317 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 PLA2G10O15496 165 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 LYRM1O43325 122 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 IGHV3-7P01780 117 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 GAPDHP04406 335 aaKnown RBP10.11□□□□□ -0.79
COPB1-208ENST00000532088 FBP1P09467 338 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 SAA2P0DJI9 122 aaPredicted RBP10.11□□□□□ -0.79
COPB1-208ENST00000532088 IGKV1-13P0DP09 117 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 GPR12P47775 334 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 DYNLT3P51808 116 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 PRB3Q04118 309 aaPredicted RBP10.11□□□□□ -0.79
COPB1-208ENST00000532088 ASAH1Q13510 395 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 RUSC1-AS1Q66K80 236 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 BRD3OSQ6XYD6 125 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 LDLRAD3Q86YD5 345 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 PDZD9Q8IXQ8 264 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 SLC38A6Q8IZM9 456 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 OR51S1Q8NGJ8 323 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 OR56B4Q8NH76 319 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 RTN4IP1Q8WWV3 396 aaPredicted RBP10.11□□□□□ -0.79
COPB1-208ENST00000532088 ANAPC16Q96DE5 110 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 MISP3Q96FF7 219 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 ZNF251Q9BRH9 671 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 FXYD6Q9H0Q3 95 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 OR2D2Q9H210 308 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 ABCB10Q9NRK6 738 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 MCUBQ9NWR8 336 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 HIVEP1P15822 2718 aa10.11□□□□□ -0.79
COPB1-208ENST00000532088 A0A1W2PPE3 182 aa10.1□□□□□ -0.79
COPB1-208ENST00000532088 OR5H14A6NHG9 310 aa10.1□□□□□ -0.79
COPB1-208ENST00000532088 VGLL3A8MV65 326 aa10.1□□□□□ -0.79
COPB1-208ENST00000532088 IGLV2-14P01704 120 aa10.1□□□□□ -0.79
COPB1-208ENST00000532088 SRD5A1P18405 259 aa10.1□□□□□ -0.79
COPB1-208ENST00000532088 DEFA1P59665 94 aa10.1□□□□□ -0.79
COPB1-208ENST00000532088 DEFA3P59666 94 aa10.1□□□□□ -0.79
COPB1-208ENST00000532088 HABP2Q14520 560 aaPredicted RBP10.1□□□□□ -0.79
COPB1-208ENST00000532088 SCGB2B2Q4G0G5 96 aa10.1□□□□□ -0.79
COPB1-208ENST00000532088 LDLRAD2Q5SZI1 272 aa10.1□□□□□ -0.79
COPB1-208ENST00000532088 FAAP20Q6NZ36 180 aa10.1□□□□□ -0.79
COPB1-208ENST00000532088 IDO2Q6ZQW0 420 aa10.1□□□□□ -0.79
COPB1-208ENST00000532088 LHFPL4Q7Z7J7 247 aa10.1□□□□□ -0.79
COPB1-208ENST00000532088 TGIF2LXQ8IUE1 241 aa10.1□□□□□ -0.79
COPB1-208ENST00000532088 BVESQ8NE79 360 aa10.1□□□□□ -0.79
COPB1-208ENST00000532088 ZFAND1Q8TCF1 268 aa10.1□□□□□ -0.79
COPB1-208ENST00000532088 TOMM40LQ969M1 308 aa10.1□□□□□ -0.79
COPB1-208ENST00000532088 ABHD14BQ96IU4 210 aa10.1□□□□□ -0.79
COPB1-208ENST00000532088 ADTRPQ96IZ2 230 aa10.1□□□□□ -0.79
COPB1-208ENST00000532088 SLC5A7Q9GZV3 580 aa10.1□□□□□ -0.79
COPB1-208ENST00000532088 SDHAF2Q9NX18 166 aa10.1□□□□□ -0.79
COPB1-208ENST00000532088 ZNRD1Q9P1U0 126 aa10.1□□□□□ -0.79
COPB1-208ENST00000532088 FAM96BQ9Y3D0 163 aa10.1□□□□□ -0.79
COPB1-208ENST00000532088 ZANQ9Y493 2812 aa10.1□□□□□ -0.79
COPB1-208ENST00000532088 IGHV3OR16-10A0A075B7F0 116 aa10.09□□□□□ -0.79
COPB1-208ENST00000532088 A0A0U1RQK1 487 aa10.09□□□□□ -0.79
COPB1-208ENST00000532088 A0A1W2PRD5 423 aa10.09□□□□□ -0.79
COPB1-208ENST00000532088 A0A1W2PRF3 423 aa10.09□□□□□ -0.79
COPB1-208ENST00000532088 A0A1W2PRM7 423 aa10.09□□□□□ -0.79
COPB1-208ENST00000532088 GPR31O00270 319 aa10.09□□□□□ -0.79
COPB1-208ENST00000532088 CRLF1O75462 422 aa10.09□□□□□ -0.79
COPB1-208ENST00000532088 S100GP29377 79 aa10.09□□□□□ -0.79
COPB1-208ENST00000532088 GNRHRP30968 328 aa10.09□□□□□ -0.79
COPB1-208ENST00000532088 FXYD4P59646 89 aa10.09□□□□□ -0.79
COPB1-208ENST00000532088 RND3P61587 244 aa10.09□□□□□ -0.79
COPB1-208ENST00000532088 IFITM3Q01628 133 aa10.09□□□□□ -0.79
COPB1-208ENST00000532088 EIF4EBP1Q13541 118 aaPredicted RBP10.09□□□□□ -0.79
COPB1-208ENST00000532088 RBMS2Q15434 407 aaKnown RBP10.09□□□□□ -0.79
COPB1-208ENST00000532088 MZT2BQ6NZ67 158 aa10.09□□□□□ -0.79
COPB1-208ENST00000532088 C16orf87Q6PH81 154 aa10.09□□□□□ -0.79
COPB1-208ENST00000532088 ZNF66Q6ZN08 573 aa10.09□□□□□ -0.79
COPB1-208ENST00000532088 CMTM1Q8IZ96 169 aa10.09□□□□□ -0.79
COPB1-208ENST00000532088 DRAM1Q8N682 238 aa10.09□□□□□ -0.79
COPB1-208ENST00000532088 ZDHHC22Q8N966 263 aa10.09□□□□□ -0.79
COPB1-208ENST00000532088 OR13C8Q8NGS7 320 aa10.09□□□□□ -0.79
COPB1-208ENST00000532088 SECTM1Q8WVN6 248 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms