RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 FAM240BA0A1B0GVZ2 78 aa11.61□□□□□ -0.55
CPSF1-206ENST00000531480 BTBD17A6NE02 478 aa11.61□□□□□ -0.55
CPSF1-206ENST00000531480 RAB29O14966 203 aa11.61□□□□□ -0.55
CPSF1-206ENST00000531480 BET1O15155 118 aa11.61□□□□□ -0.55
CPSF1-206ENST00000531480 GPR137BO60478 399 aa11.61□□□□□ -0.55
CPSF1-206ENST00000531480 PROP1O75360 226 aa11.61□□□□□ -0.55
CPSF1-206ENST00000531480 TUSC2O75896 110 aa11.61□□□□□ -0.55
CPSF1-206ENST00000531480 AKAIN1P0CW23 69 aa11.61□□□□□ -0.55
CPSF1-206ENST00000531480 SAA2P0DJI9 122 aaPredicted RBP11.61□□□□□ -0.55
CPSF1-206ENST00000531480 BRS3P32247 399 aa11.61□□□□□ -0.55
CPSF1-206ENST00000531480 RAB13P51153 203 aa11.61□□□□□ -0.55
CPSF1-206ENST00000531480 ARHGDIBP52566 201 aa11.61□□□□□ -0.55
CPSF1-206ENST00000531480 TAS2R46P59540 309 aa11.61□□□□□ -0.55
CPSF1-206ENST00000531480 BAK1Q16611 211 aa11.61□□□□□ -0.55
CPSF1-206ENST00000531480 LYG1Q8N1E2 194 aa11.61□□□□□ -0.55
CPSF1-206ENST00000531480 OR52I2Q8NH67 350 aa11.61□□□□□ -0.55
CPSF1-206ENST00000531480 SCGB3A2Q96PL1 93 aa11.61□□□□□ -0.55
CPSF1-206ENST00000531480 PIPOXQ9P0Z9 390 aa11.61□□□□□ -0.55
CPSF1-206ENST00000531480 SCP2D1Q9UJQ7 156 aa11.61□□□□□ -0.55
CPSF1-206ENST00000531480 ZNF736B4DX44 427 aaPredicted RBP11.6□□□□□ -0.55
CPSF1-206ENST00000531480 DISC1C4P0D8 188 aa11.6□□□□□ -0.55
CPSF1-206ENST00000531480 TIMM23O14925 209 aa11.6□□□□□ -0.55
CPSF1-206ENST00000531480 ST8SIA5O15466 376 aa11.6□□□□□ -0.55
CPSF1-206ENST00000531480 LYRM1O43325 122 aa11.6□□□□□ -0.55
CPSF1-206ENST00000531480 OR3A3P47888 321 aa11.6□□□□□ -0.55
CPSF1-206ENST00000531480 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.6□□□□□ -0.55
CPSF1-206ENST00000531480 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.6□□□□□ -0.55
CPSF1-206ENST00000531480 OR5AP2Q8NGF4 316 aa11.6□□□□□ -0.55
CPSF1-206ENST00000531480 PITPNC1Q9UKF7 332 aa11.6□□□□□ -0.55
CPSF1-206ENST00000531480 ANKRD20A5PA0PJZ0 165 aa11.59□□□□□ -0.55
CPSF1-206ENST00000531480 TMEM89A2RUT3 159 aa11.59□□□□□ -0.55
CPSF1-206ENST00000531480 FAM181BA6NEQ2 426 aa11.59□□□□□ -0.55
CPSF1-206ENST00000531480 CHST1O43916 411 aa11.59□□□□□ -0.55
CPSF1-206ENST00000531480 HKR1P10072 659 aa11.59□□□□□ -0.55
CPSF1-206ENST00000531480 CD1BP29016 333 aa11.59□□□□□ -0.55
CPSF1-206ENST00000531480 ECI1P42126 302 aa11.59□□□□□ -0.55
CPSF1-206ENST00000531480 DGCR2P98153 550 aa11.59□□□□□ -0.55
CPSF1-206ENST00000531480 PLA1AQ53H76 456 aa11.59□□□□□ -0.55
CPSF1-206ENST00000531480 FBLN7Q53RD9 439 aa11.59□□□□□ -0.55
CPSF1-206ENST00000531480 ZNF660Q6AZW8 331 aaPredicted RBP11.59□□□□□ -0.55
CPSF1-206ENST00000531480 PLET1Q6UQ28 207 aa11.59□□□□□ -0.55
CPSF1-206ENST00000531480 OVCH2Q7RTZ1 564 aa11.59□□□□□ -0.55
CPSF1-206ENST00000531480 C16orf82Q7Z2V1 217 aa11.59□□□□□ -0.55
CPSF1-206ENST00000531480 TGIF2LXQ8IUE1 241 aa11.59□□□□□ -0.55
CPSF1-206ENST00000531480 DRAM1Q8N682 238 aa11.59□□□□□ -0.55
CPSF1-206ENST00000531480 CHPT1Q8WUD6 406 aa11.59□□□□□ -0.55
CPSF1-206ENST00000531480 SDHCQ99643 169 aaPredicted RBP11.59□□□□□ -0.55
CPSF1-206ENST00000531480 PRRT1Q99946 306 aa11.59□□□□□ -0.55
CPSF1-206ENST00000531480 RAB18Q9NP72 206 aa11.59□□□□□ -0.55
CPSF1-206ENST00000531480 NECAP2Q9NVZ3 263 aa11.59□□□□□ -0.55
CPSF1-206ENST00000531480 OR2W1Q9Y3N9 320 aa11.59□□□□□ -0.55
CPSF1-206ENST00000531480 STAB1Q9NY15 2570 aa11.59□□□□□ -0.55
CPSF1-206ENST00000531480 TENM1Q9UKZ4 2725 aa11.59□□□□□ -0.55
CPSF1-206ENST00000531480 MEIS3P1A6NDR6 274 aa11.58□□□□□ -0.56
CPSF1-206ENST00000531480 NDUFA7O95182 113 aa11.58□□□□□ -0.56
CPSF1-206ENST00000531480 REG1BP48304 166 aa11.58□□□□□ -0.56
CPSF1-206ENST00000531480 COMPP49747 757 aaPredicted RBP11.58□□□□□ -0.56
CPSF1-206ENST00000531480 RELBQ01201 579 aa11.58□□□□□ -0.56
CPSF1-206ENST00000531480 CDK10Q15131 360 aa11.58□□□□□ -0.56
CPSF1-206ENST00000531480 RNASE10Q5GAN6 216 aaKnown RBP11.58□□□□□ -0.56
CPSF1-206ENST00000531480 STEAP1BQ6NZ63 245 aa11.58□□□□□ -0.56
CPSF1-206ENST00000531480 DHRS11Q6UWP2 260 aa11.58□□□□□ -0.56
CPSF1-206ENST00000531480 Q8N6K4 173 aa11.58□□□□□ -0.56
CPSF1-206ENST00000531480 OR56B4Q8NH76 319 aa11.58□□□□□ -0.56
CPSF1-206ENST00000531480 GIMAP1Q8WWP7 306 aa11.58□□□□□ -0.56
CPSF1-206ENST00000531480 ABHD14BQ96IU4 210 aa11.58□□□□□ -0.56
CPSF1-206ENST00000531480 S1PR3Q99500 378 aa11.58□□□□□ -0.56
CPSF1-206ENST00000531480 NABP2Q9BQ15 211 aa11.58□□□□□ -0.56
CPSF1-206ENST00000531480 GINS4Q9BRT9 223 aa11.58□□□□□ -0.56
CPSF1-206ENST00000531480 C19orf24Q9BVV8 132 aa11.58□□□□□ -0.56
CPSF1-206ENST00000531480 C1RLQ9NZP8 487 aa11.58□□□□□ -0.56
CPSF1-206ENST00000531480 TSPAN9O75954 239 aa11.57□□□□□ -0.56
CPSF1-206ENST00000531480 OR2F2O95006 317 aa11.57□□□□□ -0.56
CPSF1-206ENST00000531480 RAB3DO95716 219 aa11.57□□□□□ -0.56
CPSF1-206ENST00000531480 FAM106CPP0CH98 169 aa11.57□□□□□ -0.56
CPSF1-206ENST00000531480 CT45A6P0DMU7 189 aa11.57□□□□□ -0.56
CPSF1-206ENST00000531480 CT45A5P0DMU8 189 aa11.57□□□□□ -0.56
CPSF1-206ENST00000531480 CT45A7P0DMV0 189 aa11.57□□□□□ -0.56
CPSF1-206ENST00000531480 OR5H8P0DN80 308 aa11.57□□□□□ -0.56
CPSF1-206ENST00000531480 ARPC4P59998 168 aa11.57□□□□□ -0.56
CPSF1-206ENST00000531480 MSMO1Q15800 293 aa11.57□□□□□ -0.56
CPSF1-206ENST00000531480 LY6EQ16553 131 aa11.57□□□□□ -0.56
CPSF1-206ENST00000531480 RPL39P5Q59GN2 51 aa11.57□□□□□ -0.56
CPSF1-206ENST00000531480 C11orf88Q6PI97 169 aa11.57□□□□□ -0.56
CPSF1-206ENST00000531480 OR5H2Q8NGV7 314 aa11.57□□□□□ -0.56
CPSF1-206ENST00000531480 TRIM63Q969Q1 353 aa11.57□□□□□ -0.56
CPSF1-206ENST00000531480 C5orf30Q96GV9 206 aa11.57□□□□□ -0.56
CPSF1-206ENST00000531480 RBM14Q96PK6 669 aaKnown RBP11.57□□□□□ -0.56
CPSF1-206ENST00000531480 SLC25A21Q9BQT8 299 aaPredicted RBP11.57□□□□□ -0.56
CPSF1-206ENST00000531480 TNFRSF19Q9NS68 423 aa11.57□□□□□ -0.56
CPSF1-206ENST00000531480 MCUBQ9NWR8 336 aa11.57□□□□□ -0.56
CPSF1-206ENST00000531480 KLK11Q9UBX7 282 aa11.57□□□□□ -0.56
CPSF1-206ENST00000531480 IGKV1D-13A0A0B4J2D9 117 aa11.56□□□□□ -0.56
CPSF1-206ENST00000531480 LINC00854A0A1B0GVQ3 168 aa11.56□□□□□ -0.56
CPSF1-206ENST00000531480 DHFRP00374 187 aa11.56□□□□□ -0.56
CPSF1-206ENST00000531480 IGLV2-14P01704 120 aa11.56□□□□□ -0.56
CPSF1-206ENST00000531480 SNRNP70P08621 437 aaKnown RBP11.56□□□□□ -0.56
CPSF1-206ENST00000531480 OR8U9P0C7N5 309 aa11.56□□□□□ -0.56
CPSF1-206ENST00000531480 IGKV1-13P0DP09 117 aa11.56□□□□□ -0.56
CPSF1-206ENST00000531480 NFYAP23511 347 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms