RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 ZNF616Q08AN1 781 aa17.34■□□□□ 0.37
TRAPPC4-210ENST00000531290 KIAA0141Q14154 515 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC4-210ENST00000531290 KCTD21Q4G0X4 260 aa17.34■□□□□ 0.37
TRAPPC4-210ENST00000531290 ZNF660Q6AZW8 331 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC4-210ENST00000531290 FAM89BQ8N5H3 189 aa17.34■□□□□ 0.37
TRAPPC4-210ENST00000531290 MINDY2Q8NBR6 621 aa17.34■□□□□ 0.37
TRAPPC4-210ENST00000531290 EDARADDQ8WWZ3 215 aa17.34■□□□□ 0.37
TRAPPC4-210ENST00000531290 FAM3DQ96BQ1 224 aa17.34■□□□□ 0.37
TRAPPC4-210ENST00000531290 ABHD14BQ96IU4 210 aa17.34■□□□□ 0.37
TRAPPC4-210ENST00000531290 PRR25Q96S07 402 aa17.34■□□□□ 0.37
TRAPPC4-210ENST00000531290 SSR3Q9UNL2 185 aa17.34■□□□□ 0.37
TRAPPC4-210ENST00000531290 I3L521 148 aa17.33■□□□□ 0.36
TRAPPC4-210ENST00000531290 ITGB1BP1O14713 200 aa17.33■□□□□ 0.36
TRAPPC4-210ENST00000531290 RRHO14718 337 aa17.33■□□□□ 0.36
TRAPPC4-210ENST00000531290 NHLRC4P0CG21 123 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC4-210ENST00000531290 ECSCRQ19T08 205 aa17.33■□□□□ 0.36
TRAPPC4-210ENST00000531290 C22orf42Q6IC83 251 aa17.33■□□□□ 0.36
TRAPPC4-210ENST00000531290 GLDNQ6ZMI3 551 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC4-210ENST00000531290 GFI1Q99684 422 aa17.33■□□□□ 0.36
TRAPPC4-210ENST00000531290 HDHD3Q9BSH5 251 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC4-210ENST00000531290 PARP12Q9H0J9 701 aaKnown RBP17.33■□□□□ 0.36
TRAPPC4-210ENST00000531290 FBXL15Q9H469 300 aa17.33■□□□□ 0.36
TRAPPC4-210ENST00000531290 HSF4Q9ULV5 492 aa17.33■□□□□ 0.36
TRAPPC4-210ENST00000531290 WASHC3Q9Y3C0 194 aa17.33■□□□□ 0.36
TRAPPC4-210ENST00000531290 RBBP9O75884 186 aa17.32■□□□□ 0.36
TRAPPC4-210ENST00000531290 RAB3BP20337 219 aa17.32■□□□□ 0.36
TRAPPC4-210ENST00000531290 INSL3P51460 131 aa17.32■□□□□ 0.36
TRAPPC4-210ENST00000531290 CX3CL1P78423 397 aa17.32■□□□□ 0.36
TRAPPC4-210ENST00000531290 HLA-DRB3P79483 266 aa17.32■□□□□ 0.36
TRAPPC4-210ENST00000531290 TMEM267Q0VDI3 215 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC4-210ENST00000531290 C2orf76Q3KRA6 126 aa17.32■□□□□ 0.36
TRAPPC4-210ENST00000531290 HES5Q5TA89 166 aa17.32■□□□□ 0.36
TRAPPC4-210ENST00000531290 ABHD5Q8WTS1 349 aa17.32■□□□□ 0.36
TRAPPC4-210ENST00000531290 WWC2-AS2Q96NR7 200 aa17.32■□□□□ 0.36
TRAPPC4-210ENST00000531290 AGMATQ9BSE5 352 aa17.32■□□□□ 0.36
TRAPPC4-210ENST00000531290 C11orf54Q9H0W9 315 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC4-210ENST00000531290 VCX3AQ9NNX9 186 aa17.32■□□□□ 0.36
TRAPPC4-210ENST00000531290 C12orf4Q9NQ89 552 aa17.32■□□□□ 0.36
TRAPPC4-210ENST00000531290 OR1A1Q9P1Q5 309 aa17.32■□□□□ 0.36
TRAPPC4-210ENST00000531290 STUB1Q9UNE7 303 aa17.32■□□□□ 0.36
TRAPPC4-210ENST00000531290 A3GALT2U3KPV4 340 aa17.32■□□□□ 0.36
TRAPPC4-210ENST00000531290 A0A1W2PN81 502 aa17.31■□□□□ 0.36
TRAPPC4-210ENST00000531290 H0YJW9 148 aa17.31■□□□□ 0.36
TRAPPC4-210ENST00000531290 CHRNA7P36544 502 aa17.31■□□□□ 0.36
TRAPPC4-210ENST00000531290 VEGFCP49767 419 aa17.31■□□□□ 0.36
TRAPPC4-210ENST00000531290 CLDN12P56749 244 aa17.31■□□□□ 0.36
TRAPPC4-210ENST00000531290 GNB1P62873 340 aa17.31■□□□□ 0.36
TRAPPC4-210ENST00000531290 NEDD8Q15843 81 aa17.31■□□□□ 0.36
TRAPPC4-210ENST00000531290 TCTEX1D1Q8N7M0 179 aa17.31■□□□□ 0.36
TRAPPC4-210ENST00000531290 OR5AN1Q8NGI8 311 aa17.31■□□□□ 0.36
TRAPPC4-210ENST00000531290 RNF5Q99942 180 aa17.31■□□□□ 0.36
TRAPPC4-210ENST00000531290 Q9N2K0 584 aa17.31■□□□□ 0.36
TRAPPC4-210ENST00000531290 RNF150Q9ULK6 438 aa17.31■□□□□ 0.36
TRAPPC4-210ENST00000531290 FOXA2Q9Y261 457 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC4-210ENST00000531290 LSM4Q9Y4Z0 139 aaKnown RBP17.31■□□□□ 0.36
TRAPPC4-210ENST00000531290 FCN1O00602 326 aa17.3■□□□□ 0.36
TRAPPC4-210ENST00000531290 SCTP09683 121 aa17.3■□□□□ 0.36
TRAPPC4-210ENST00000531290 FGF9P31371 208 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC4-210ENST00000531290 TMEM50BP56557 158 aa17.3■□□□□ 0.36
TRAPPC4-210ENST00000531290 OR56B1Q8NGI3 324 aa17.3■□□□□ 0.36
TRAPPC4-210ENST00000531290 ARHGAP5-AS1Q96IT6 56 aa17.3■□□□□ 0.36
TRAPPC4-210ENST00000531290 CMSS1Q9BQ75 279 aaKnown RBP17.3■□□□□ 0.36
TRAPPC4-210ENST00000531290 ZNF221Q9UK13 617 aa17.3■□□□□ 0.36
TRAPPC4-210ENST00000531290 RAB22AQ9UL26 194 aa17.3■□□□□ 0.36
TRAPPC4-210ENST00000531290 ZNF256Q9Y2P7 627 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC4-210ENST00000531290 IFITM5A6NNB3 132 aa17.29■□□□□ 0.36
TRAPPC4-210ENST00000531290 TNFAIP8O95379 198 aa17.29■□□□□ 0.36
TRAPPC4-210ENST00000531290 LY86O95711 162 aa17.29■□□□□ 0.36
TRAPPC4-210ENST00000531290 NDPQ00604 133 aa17.29■□□□□ 0.36
TRAPPC4-210ENST00000531290 PTX4Q96A99 478 aa17.29■□□□□ 0.36
TRAPPC4-210ENST00000531290 CLCC1Q96S66 551 aa17.29■□□□□ 0.36
TRAPPC4-210ENST00000531290 PECRQ9BY49 303 aa17.29■□□□□ 0.36
TRAPPC4-210ENST00000531290 TXNL4BQ9NX01 149 aaKnown RBP17.29■□□□□ 0.36
TRAPPC4-210ENST00000531290 FBXO7Q9Y3I1 522 aa17.29■□□□□ 0.36
TRAPPC4-210ENST00000531290 FOXI3A8MTJ6 420 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC4-210ENST00000531290 CD40LGP29965 261 aa17.28■□□□□ 0.36
TRAPPC4-210ENST00000531290 CRIP2P52943 208 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC4-210ENST00000531290 OR10A3P58181 314 aa17.28■□□□□ 0.36
TRAPPC4-210ENST00000531290 MRPS15P82914 257 aaKnown RBP17.28■□□□□ 0.36
TRAPPC4-210ENST00000531290 ASPHD1Q5U4P2 390 aa17.28■□□□□ 0.36
TRAPPC4-210ENST00000531290 TPRA1Q86W33 373 aa17.28■□□□□ 0.36
TRAPPC4-210ENST00000531290 PPP1R27Q86WC6 154 aa17.28■□□□□ 0.36
TRAPPC4-210ENST00000531290 DRAXINQ8NBI3 349 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC4-210ENST00000531290 DCUN1D4Q92564 292 aa17.28■□□□□ 0.36
TRAPPC4-210ENST00000531290 TSNAXQ99598 290 aaKnown RBP17.28■□□□□ 0.36
TRAPPC4-210ENST00000531290 METTL1Q9UBP6 276 aaKnown RBP17.28■□□□□ 0.36
TRAPPC4-210ENST00000531290 NUBP2Q9Y5Y2 271 aa17.28■□□□□ 0.36
TRAPPC4-210ENST00000531290 COL7A1Q02388 2944 aa17.27■□□□□ 0.36
TRAPPC4-210ENST00000531290 A0A087WXM4 84 aa17.27■□□□□ 0.36
TRAPPC4-210ENST00000531290 TRDCB7Z8K6 153 aa17.27■□□□□ 0.36
TRAPPC4-210ENST00000531290 OVOL1O14753 267 aa17.27■□□□□ 0.36
TRAPPC4-210ENST00000531290 SOX15O60248 233 aa17.27■□□□□ 0.36
TRAPPC4-210ENST00000531290 RPS16P62249 146 aaKnown RBP17.27■□□□□ 0.36
TRAPPC4-210ENST00000531290 PSG5Q15238 335 aa17.27■□□□□ 0.36
TRAPPC4-210ENST00000531290 ACTBL2Q562R1 376 aa17.27■□□□□ 0.36
TRAPPC4-210ENST00000531290 C19orf54Q5BKX5 351 aa17.27■□□□□ 0.36
TRAPPC4-210ENST00000531290 PYHIN1Q6K0P9 492 aa17.27■□□□□ 0.36
TRAPPC4-210ENST00000531290 ZNF562Q6V9R5 426 aa17.27■□□□□ 0.36
TRAPPC4-210ENST00000531290 ZNF429Q86V71 674 aa17.27■□□□□ 0.36
TRAPPC4-210ENST00000531290 TSPAN14Q8NG11 270 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms