RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 CD7P09564 240 aa3.5□□□□□ -1.85
CAPRIN1-208ENST00000530008 SLCO1A2P46721 670 aa3.5□□□□□ -1.85
CAPRIN1-208ENST00000530008 TMEM33P57088 247 aa3.5□□□□□ -1.85
CAPRIN1-208ENST00000530008 AP3S2P59780 193 aa3.5□□□□□ -1.85
CAPRIN1-208ENST00000530008 LSM6P62312 80 aaKnown RBP3.5□□□□□ -1.85
CAPRIN1-208ENST00000530008 HIST3H3Q16695 136 aa3.5□□□□□ -1.85
CAPRIN1-208ENST00000530008 OR5P3Q8WZ94 311 aa3.5□□□□□ -1.85
CAPRIN1-208ENST00000530008 MS4A6EQ96DS6 147 aa3.5□□□□□ -1.85
CAPRIN1-208ENST00000530008 C1QTNF6Q9BXI9 259 aa3.5□□□□□ -1.85
CAPRIN1-208ENST00000530008 OR51I2Q9H344 312 aa3.5□□□□□ -1.85
CAPRIN1-208ENST00000530008 ASF1BQ9NVP2 202 aa3.5□□□□□ -1.85
CAPRIN1-208ENST00000530008 LSM5Q9Y4Y9 91 aaKnown RBP3.5□□□□□ -1.85
CAPRIN1-208ENST00000530008 TMED7-TICAM2A0A0A6YYA0 188 aa3.49□□□□□ -1.85
CAPRIN1-208ENST00000530008 TGIF2-C20orf24A0A0A6YYL0 155 aa3.49□□□□□ -1.85
CAPRIN1-208ENST00000530008 A0A1W2PNU3 283 aaPredicted RBP3.49□□□□□ -1.85
CAPRIN1-208ENST00000530008 GSTZ1O43708 216 aaPredicted RBP3.49□□□□□ -1.85
CAPRIN1-208ENST00000530008 CTXN2P0C2S0 81 aa3.49□□□□□ -1.85
CAPRIN1-208ENST00000530008 UCHL3P15374 230 aa3.49□□□□□ -1.85
CAPRIN1-208ENST00000530008 RAB5BP61020 215 aa3.49□□□□□ -1.85
CAPRIN1-208ENST00000530008 AESQ08117 197 aa3.49□□□□□ -1.85
CAPRIN1-208ENST00000530008 BATFQ16520 125 aa3.49□□□□□ -1.85
CAPRIN1-208ENST00000530008 C1orf194Q5T5A4 169 aa3.49□□□□□ -1.85
CAPRIN1-208ENST00000530008 AMMECR1LQ6DCA0 310 aa3.49□□□□□ -1.85
CAPRIN1-208ENST00000530008 BAP18Q8IXM2 172 aa3.49□□□□□ -1.85
CAPRIN1-208ENST00000530008 C1orf174Q8IYL3 243 aa3.49□□□□□ -1.85
CAPRIN1-208ENST00000530008 Q8NAQ8 132 aa3.49□□□□□ -1.85
CAPRIN1-208ENST00000530008 IMP4Q96G21 291 aaKnown RBP3.49□□□□□ -1.85
CAPRIN1-208ENST00000530008 SLC22A13Q9Y226 551 aa3.49□□□□□ -1.85
CAPRIN1-208ENST00000530008 ADGRL1O94910 1474 aa3.48□□□□□ -1.85
CAPRIN1-208ENST00000530008 A0A1B0GU33 70 aa3.48□□□□□ -1.85
CAPRIN1-208ENST00000530008 A0A1W2PQ67 120 aa3.48□□□□□ -1.85
CAPRIN1-208ENST00000530008 TRAPPC3O43617 180 aa3.48□□□□□ -1.85
CAPRIN1-208ENST00000530008 TCRBP04435 133 aa3.48□□□□□ -1.85
CAPRIN1-208ENST00000530008 OMPP47874 163 aa3.48□□□□□ -1.85
CAPRIN1-208ENST00000530008 ZNF141Q15928 474 aa3.48□□□□□ -1.85
CAPRIN1-208ENST00000530008 IGFBP7Q16270 282 aa3.48□□□□□ -1.85
CAPRIN1-208ENST00000530008 MRPL51Q4U2R6 128 aaKnown RBP3.48□□□□□ -1.85
CAPRIN1-208ENST00000530008 SBSNQ6UWP8 590 aa3.48□□□□□ -1.85
CAPRIN1-208ENST00000530008 IGFL3Q6UXB1 125 aa3.48□□□□□ -1.85
CAPRIN1-208ENST00000530008 HIST2H3AQ71DI3 136 aa3.48□□□□□ -1.85
CAPRIN1-208ENST00000530008 SCXQ7RTU7 201 aa3.48□□□□□ -1.85
CAPRIN1-208ENST00000530008 ZNF550Q7Z398 422 aa3.48□□□□□ -1.85
CAPRIN1-208ENST00000530008 LYPD6Q86Y78 171 aa3.48□□□□□ -1.85
CAPRIN1-208ENST00000530008 SLC25A44Q96H78 314 aaPredicted RBP3.48□□□□□ -1.85
CAPRIN1-208ENST00000530008 DIRAS2Q96HU8 199 aa3.48□□□□□ -1.85
CAPRIN1-208ENST00000530008 ABCG5Q9H222 651 aa3.48□□□□□ -1.85
CAPRIN1-208ENST00000530008 KIF26AQ9ULI4 1882 aaPredicted RBP3.47□□□□□ -1.85
CAPRIN1-208ENST00000530008 CHD2O14647 1828 aaKnown RBP3.47□□□□□ -1.85
CAPRIN1-208ENST00000530008 IGSF23A1L1A6 192 aa3.47□□□□□ -1.85
CAPRIN1-208ENST00000530008 VGLL3A8MV65 326 aa3.47□□□□□ -1.85
CAPRIN1-208ENST00000530008 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
CAPRIN1-208ENST00000530008 A8MWP6 167 aa3.47□□□□□ -1.85
CAPRIN1-208ENST00000530008 CPSF4O95639 269 aaKnown RBP3.47□□□□□ -1.85
CAPRIN1-208ENST00000530008 IGHV3-30-3P0DP02 117 aa3.47□□□□□ -1.85
CAPRIN1-208ENST00000530008 HRES1P13985 223 aa3.47□□□□□ -1.85
CAPRIN1-208ENST00000530008 ATP6V0CP27449 155 aa3.47□□□□□ -1.85
CAPRIN1-208ENST00000530008 SULT1A1P50225 295 aa3.47□□□□□ -1.85
CAPRIN1-208ENST00000530008 PRDX4Q13162 271 aa3.47□□□□□ -1.85
CAPRIN1-208ENST00000530008 SPOPLQ6IQ16 392 aa3.47□□□□□ -1.85
CAPRIN1-208ENST00000530008 CPNE2Q96FN4 548 aaPredicted RBP3.47□□□□□ -1.85
CAPRIN1-208ENST00000530008 FKBP14Q9NWM8 211 aa3.47□□□□□ -1.85
CAPRIN1-208ENST00000530008 HHLA2Q9UM44 414 aa3.47□□□□□ -1.85
CAPRIN1-208ENST00000530008 CEP170Q5SW79 1584 aa3.46□□□□□ -1.85
CAPRIN1-208ENST00000530008 YLPM1P49750 1951 aaKnown RBP3.46□□□□□ -1.86
CAPRIN1-208ENST00000530008 KPNA3O00505 521 aaPredicted RBP3.46□□□□□ -1.86
CAPRIN1-208ENST00000530008 IFNA6P05013 189 aa3.46□□□□□ -1.86
CAPRIN1-208ENST00000530008 CRYGDP07320 174 aa3.46□□□□□ -1.86
CAPRIN1-208ENST00000530008 MARCKSL1P49006 195 aa3.46□□□□□ -1.86
CAPRIN1-208ENST00000530008 IDH3GP51553 393 aaPredicted RBP3.46□□□□□ -1.86
CAPRIN1-208ENST00000530008 RANP62826 216 aaKnown RBP3.46□□□□□ -1.86
CAPRIN1-208ENST00000530008 CCL7P80098 99 aa3.46□□□□□ -1.86
CAPRIN1-208ENST00000530008 REEP5Q00765 189 aa3.46□□□□□ -1.86
CAPRIN1-208ENST00000530008 TMEM31Q5JXX7 168 aa3.46□□□□□ -1.86
CAPRIN1-208ENST00000530008 LRRC34Q8IZ02 419 aa3.46□□□□□ -1.86
CAPRIN1-208ENST00000530008 OR51D1Q8NGF3 324 aa3.46□□□□□ -1.86
CAPRIN1-208ENST00000530008 SLC2A9Q9NRM0 540 aa3.46□□□□□ -1.86
CAPRIN1-208ENST00000530008 SPRR5A0A1B0GTR4 108 aa3.45□□□□□ -1.86
CAPRIN1-208ENST00000530008 DISC1C4P0D8 188 aa3.45□□□□□ -1.86
CAPRIN1-208ENST00000530008 HLA-DQB2P05538 268 aa3.45□□□□□ -1.86
CAPRIN1-208ENST00000530008 CCL1P22362 96 aa3.45□□□□□ -1.86
CAPRIN1-208ENST00000530008 MAP2K4P45985 399 aa3.45□□□□□ -1.86
CAPRIN1-208ENST00000530008 CDK9P50750 372 aaKnown RBP3.45□□□□□ -1.86
CAPRIN1-208ENST00000530008 TAS2R45P59539 299 aa3.45□□□□□ -1.86
CAPRIN1-208ENST00000530008 BTN3A2P78410 334 aa3.45□□□□□ -1.86
CAPRIN1-208ENST00000530008 PLPPR5Q32ZL2 321 aa3.45□□□□□ -1.86
CAPRIN1-208ENST00000530008 HIST2H3PS2Q5TEC6 136 aa3.45□□□□□ -1.86
CAPRIN1-208ENST00000530008 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
CAPRIN1-208ENST00000530008 LY6G5BQ8NDX9 201 aa3.45□□□□□ -1.86
CAPRIN1-208ENST00000530008 OR2D3Q8NGH3 330 aa3.45□□□□□ -1.86
CAPRIN1-208ENST00000530008 UPK3BQ9BT76 320 aa3.45□□□□□ -1.86
CAPRIN1-208ENST00000530008 PECRQ9BY49 303 aa3.45□□□□□ -1.86
CAPRIN1-208ENST00000530008 NKX6-2Q9C056 277 aaPredicted RBP3.45□□□□□ -1.86
CAPRIN1-208ENST00000530008 VPS29Q9UBQ0 182 aa3.45□□□□□ -1.86
CAPRIN1-208ENST00000530008 ZFYVE9O95405 1425 aa3.44□□□□□ -1.86
CAPRIN1-208ENST00000530008 SPATA31E1Q6ZUB1 1445 aa3.44□□□□□ -1.86
CAPRIN1-208ENST00000530008 THSD7AQ9UPZ6 1657 aa3.44□□□□□ -1.86
CAPRIN1-208ENST00000530008 RTL8CO15255 209 aa3.44□□□□□ -1.86
CAPRIN1-208ENST00000530008 SYNGR2O43760 224 aa3.44□□□□□ -1.86
CAPRIN1-208ENST00000530008 APOMO95445 188 aa3.44□□□□□ -1.86
CAPRIN1-208ENST00000530008 KRT75O95678 551 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms