RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 CCDC90BQ9GZT6 254 aa10.08□□□□□ -0.8
CPSF1-204ENST00000529288 C11orf54Q9H0W9 315 aaPredicted RBP10.08□□□□□ -0.8
CPSF1-204ENST00000529288 LPAR5Q9H1C0 372 aa10.08□□□□□ -0.8
CPSF1-204ENST00000529288 RIMS4Q9H426 269 aaPredicted RBP10.08□□□□□ -0.8
CPSF1-204ENST00000529288 METTL1Q9UBP6 276 aaKnown RBP10.08□□□□□ -0.8
CPSF1-204ENST00000529288 ZNF221Q9UK13 617 aa10.08□□□□□ -0.8
CPSF1-204ENST00000529288 RAB26Q9ULW5 256 aa10.08□□□□□ -0.8
CPSF1-204ENST00000529288 GAB2Q9UQC2 676 aa10.08□□□□□ -0.8
CPSF1-204ENST00000529288 WASHC3Q9Y3C0 194 aa10.08□□□□□ -0.8
CPSF1-204ENST00000529288 SMAD5-AS1Q9Y6J3 95 aa10.08□□□□□ -0.8
CPSF1-204ENST00000529288 KMT2CQ8NEZ4 4911 aaKnown RBP10.08□□□□□ -0.8
CPSF1-204ENST00000529288 IGHV4OR15-8A0A075B7B6 117 aa10.07□□□□□ -0.8
CPSF1-204ENST00000529288 A0A087WW49 117 aa10.07□□□□□ -0.8
CPSF1-204ENST00000529288 OR5H14A6NHG9 310 aa10.07□□□□□ -0.8
CPSF1-204ENST00000529288 H0YJW9 148 aa10.07□□□□□ -0.8
CPSF1-204ENST00000529288 SOX15O60248 233 aa10.07□□□□□ -0.8
CPSF1-204ENST00000529288 UCHL1P09936 223 aa10.07□□□□□ -0.8
CPSF1-204ENST00000529288 SNRPBP14678 240 aaKnown RBP10.07□□□□□ -0.8
CPSF1-204ENST00000529288 CPEP16870 476 aa10.07□□□□□ -0.8
CPSF1-204ENST00000529288 CD40LGP29965 261 aa10.07□□□□□ -0.8
CPSF1-204ENST00000529288 INSL3P51460 131 aa10.07□□□□□ -0.8
CPSF1-204ENST00000529288 CLDN12P56749 244 aa10.07□□□□□ -0.8
CPSF1-204ENST00000529288 LINC00205P59089 165 aa10.07□□□□□ -0.8
CPSF1-204ENST00000529288 RPS25P62851 125 aaKnown RBP10.07□□□□□ -0.8
CPSF1-204ENST00000529288 QRFPP83859 136 aa10.07□□□□□ -0.8
CPSF1-204ENST00000529288 ACTBL2Q562R1 376 aa10.07□□□□□ -0.8
CPSF1-204ENST00000529288 ZNF880Q6PDB4 577 aa10.07□□□□□ -0.8
CPSF1-204ENST00000529288 OVCH2Q7RTZ1 564 aa10.07□□□□□ -0.8
CPSF1-204ENST00000529288 ZNF429Q86V71 674 aa10.07□□□□□ -0.8
CPSF1-204ENST00000529288 LFNGQ8NES3 379 aa10.07□□□□□ -0.8
CPSF1-204ENST00000529288 EDARADDQ8WWZ3 215 aa10.07□□□□□ -0.8
CPSF1-204ENST00000529288 CNBD2Q96M20 576 aa10.07□□□□□ -0.8
CPSF1-204ENST00000529288 CMSS1Q9BQ75 279 aaKnown RBP10.07□□□□□ -0.8
CPSF1-204ENST00000529288 GHITMQ9H3K2 345 aa10.07□□□□□ -0.8
CPSF1-204ENST00000529288 ZNF355PQ9NSJ1 428 aa10.07□□□□□ -0.8
CPSF1-204ENST00000529288 CA2P00918 260 aa10.06□□□□□ -0.8
CPSF1-204ENST00000529288 LGALS1P09382 135 aaKnown RBP10.06□□□□□ -0.8
CPSF1-204ENST00000529288 EGR2P11161 476 aaPredicted RBP10.06□□□□□ -0.8
CPSF1-204ENST00000529288 TPPP2P59282 170 aa10.06□□□□□ -0.8
CPSF1-204ENST00000529288 PSG5Q15238 335 aa10.06□□□□□ -0.8
CPSF1-204ENST00000529288 GRPEL2Q8TAA5 225 aa10.06□□□□□ -0.8
CPSF1-204ENST00000529288 ARPC1AQ92747 370 aa10.06□□□□□ -0.8
CPSF1-204ENST00000529288 ARHGAP5-AS1Q96IT6 56 aa10.06□□□□□ -0.8
CPSF1-204ENST00000529288 GFI1Q99684 422 aa10.06□□□□□ -0.8
CPSF1-204ENST00000529288 PECRQ9BY49 303 aa10.06□□□□□ -0.8
CPSF1-204ENST00000529288 TOLLIPQ9H0E2 274 aa10.06□□□□□ -0.8
CPSF1-204ENST00000529288 Q9N2K0 584 aa10.06□□□□□ -0.8
CPSF1-204ENST00000529288 RRP15Q9Y3B9 282 aaKnown RBP10.06□□□□□ -0.8
CPSF1-204ENST00000529288 TPRKBQ9Y3C4 175 aa10.06□□□□□ -0.8
CPSF1-204ENST00000529288 NUBP2Q9Y5Y2 271 aa10.06□□□□□ -0.8
CPSF1-204ENST00000529288 M0R1X1 148 aa10.05□□□□□ -0.8
CPSF1-204ENST00000529288 SLC17A2O00624 439 aa10.05□□□□□ -0.8
CPSF1-204ENST00000529288 RGS10O43665 173 aa10.05□□□□□ -0.8
CPSF1-204ENST00000529288 RBBP9O75884 186 aa10.05□□□□□ -0.8
CPSF1-204ENST00000529288 APOA2P02652 100 aa10.05□□□□□ -0.8
CPSF1-204ENST00000529288 SPNP16150 400 aa10.05□□□□□ -0.8
CPSF1-204ENST00000529288 CALRP27797 417 aaKnown RBP10.05□□□□□ -0.8
CPSF1-204ENST00000529288 MRPS15P82914 257 aaKnown RBP10.05□□□□□ -0.8
CPSF1-204ENST00000529288 PITPNAQ00169 270 aa10.05□□□□□ -0.8
CPSF1-204ENST00000529288 TMEM91Q6ZNR0 172 aa10.05□□□□□ -0.8
CPSF1-204ENST00000529288 PRSS48Q7RTY5 328 aa10.05□□□□□ -0.8
CPSF1-204ENST00000529288 TCTEX1D1Q8N7M0 179 aa10.05□□□□□ -0.8
CPSF1-204ENST00000529288 OR5AN1Q8NGI8 311 aa10.05□□□□□ -0.8
CPSF1-204ENST00000529288 OR4C12Q96R67 309 aa10.05□□□□□ -0.8
CPSF1-204ENST00000529288 TSNAXQ99598 290 aaKnown RBP10.05□□□□□ -0.8
CPSF1-204ENST00000529288 RSRP1Q9BUV0 290 aa10.05□□□□□ -0.8
CPSF1-204ENST00000529288 C12orf4Q9NQ89 552 aa10.05□□□□□ -0.8
CPSF1-204ENST00000529288 MGAT4AQ9UM21 535 aa10.05□□□□□ -0.8
CPSF1-204ENST00000529288 TRBV6-6A0A0A6YYG2 114 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 TRDCB7Z8K6 153 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 BET1O15155 118 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 DENRO43583 198 aaKnown RBP10.04□□□□□ -0.8
CPSF1-204ENST00000529288 SLC25A17O43808 307 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 ARL6IP5O75915 188 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 CNIH1O95406 144 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 TRGV3P03979 118 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 HSPB1P04792 205 aaKnown RBP10.04□□□□□ -0.8
CPSF1-204ENST00000529288 TFAP2AP05549 437 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 CD3GP09693 182 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 GP9P14770 177 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 MAP2K4P45985 399 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 TMEM50BP56557 158 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 TPBGQ13641 420 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 FXYD3Q14802 87 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 SRSF7Q16629 238 aaKnown RBP eCLIP10.04□□□□□ -0.8
CPSF1-204ENST00000529288 C2orf76Q3KRA6 126 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 C19orf54Q5BKX5 351 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 HES5Q5TA89 166 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 PYHIN1Q6K0P9 492 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 ZNF562Q6V9R5 426 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 HAPLN4Q86UW8 402 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 FAM89BQ8N5H3 189 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 ZNF383Q8NA42 475 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 OR5T1Q8NG75 326 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 OR6Q1Q8NGQ2 317 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 FAM3DQ96BQ1 224 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 FLYWCH2Q96CP2 140 aaKnown RBP10.04□□□□□ -0.8
CPSF1-204ENST00000529288 RNF5Q99942 180 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 AGMATQ9BSE5 352 aa10.04□□□□□ -0.8
CPSF1-204ENST00000529288 TPSG1Q9NRR2 321 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms