RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 LGALS14Q8TCE9 139 aa11.26□□□□□ -0.61
CAPN1-216ENST00000528739 CLCC1Q96S66 551 aa11.26□□□□□ -0.61
CAPN1-216ENST00000528739 WASHC3Q9Y3C0 194 aa11.26□□□□□ -0.61
CAPN1-216ENST00000528739 WSB1Q9Y6I7 421 aa11.26□□□□□ -0.61
CAPN1-216ENST00000528739 MGAM2Q2M2H8 2515 aa11.26□□□□□ -0.61
CAPN1-216ENST00000528739 A0A087WXM4 84 aa11.25□□□□□ -0.61
CAPN1-216ENST00000528739 IGKV1-6A0A0C4DH72 117 aa11.25□□□□□ -0.61
CAPN1-216ENST00000528739 H0YJW9 148 aa11.25□□□□□ -0.61
CAPN1-216ENST00000528739 M0R1X1 148 aa11.25□□□□□ -0.61
CAPN1-216ENST00000528739 TNFAIP8O95379 198 aa11.25□□□□□ -0.61
CAPN1-216ENST00000528739 APOA2P02652 100 aa11.25□□□□□ -0.61
CAPN1-216ENST00000528739 TFAP2AP05549 437 aa11.25□□□□□ -0.61
CAPN1-216ENST00000528739 GNG2P59768 71 aa11.25□□□□□ -0.61
CAPN1-216ENST00000528739 RPS16P62249 146 aaKnown RBP11.25□□□□□ -0.61
CAPN1-216ENST00000528739 C5orf64Q2M2E5 130 aa11.25□□□□□ -0.61
CAPN1-216ENST00000528739 TIMM50Q3ZCQ8 353 aa11.25□□□□□ -0.61
CAPN1-216ENST00000528739 SAMD5Q5TGI4 173 aa11.25□□□□□ -0.61
CAPN1-216ENST00000528739 TMEM65Q6PI78 240 aa11.25□□□□□ -0.61
CAPN1-216ENST00000528739 LCNL1Q6ZST4 164 aa11.25□□□□□ -0.61
CAPN1-216ENST00000528739 C18orf65Q6ZTR6 163 aa11.25□□□□□ -0.61
CAPN1-216ENST00000528739 TSPAN14Q8NG11 270 aa11.25□□□□□ -0.61
CAPN1-216ENST00000528739 CENPOQ9BU64 300 aa11.25□□□□□ -0.61
CAPN1-216ENST00000528739 OR2D2Q9H210 308 aa11.25□□□□□ -0.61
CAPN1-216ENST00000528739 FBXL15Q9H469 300 aa11.25□□□□□ -0.61
CAPN1-216ENST00000528739 ELF5Q9UKW6 265 aaPredicted RBP11.25□□□□□ -0.61
CAPN1-216ENST00000528739 CMYA5Q8N3K9 4069 aa11.25□□□□□ -0.61
CAPN1-216ENST00000528739 SCGNO76038 276 aa11.24□□□□□ -0.61
CAPN1-216ENST00000528739 RPLP1P05386 114 aaKnown RBP11.24□□□□□ -0.61
CAPN1-216ENST00000528739 OR5H8P0DN80 308 aa11.24□□□□□ -0.61
CAPN1-216ENST00000528739 LSM3P62310 102 aaKnown RBP11.24□□□□□ -0.61
CAPN1-216ENST00000528739 CBX3Q13185 183 aa11.24□□□□□ -0.61
CAPN1-216ENST00000528739 BEAN1Q3B7T3 259 aa11.24□□□□□ -0.61
CAPN1-216ENST00000528739 AGMATQ9BSE5 352 aa11.24□□□□□ -0.61
CAPN1-216ENST00000528739 OR51J1Q9H342 316 aa11.24□□□□□ -0.61
CAPN1-216ENST00000528739 A3GALT2U3KPV4 340 aa11.24□□□□□ -0.61
CAPN1-216ENST00000528739 WNK1Q9H4A3 2382 aa11.24□□□□□ -0.61
CAPN1-216ENST00000528739 RRHO14718 337 aa11.23□□□□□ -0.61
CAPN1-216ENST00000528739 ATP6V0E1O15342 81 aa11.23□□□□□ -0.61
CAPN1-216ENST00000528739 AIREO43918 545 aa11.23□□□□□ -0.61
CAPN1-216ENST00000528739 LINC00205P59089 165 aa11.23□□□□□ -0.61
CAPN1-216ENST00000528739 ECSCRQ19T08 205 aa11.23□□□□□ -0.61
CAPN1-216ENST00000528739 HACD4Q5VWC8 232 aa11.23□□□□□ -0.61
CAPN1-216ENST00000528739 ZNF695Q8IW36 515 aa11.23□□□□□ -0.61
CAPN1-216ENST00000528739 NUDCD2Q8WVJ2 157 aa11.23□□□□□ -0.61
CAPN1-216ENST00000528739 DUX3Q96PT4 197 aa11.23□□□□□ -0.61
CAPN1-216ENST00000528739 SLC35D1Q9NTN3 355 aa11.23□□□□□ -0.61
CAPN1-216ENST00000528739 RHBDL2Q9NX52 303 aa11.23□□□□□ -0.61
CAPN1-216ENST00000528739 METTL1Q9UBP6 276 aaKnown RBP11.23□□□□□ -0.61
CAPN1-216ENST00000528739 TRAV18A0A075B6X5 111 aa11.22□□□□□ -0.61
CAPN1-216ENST00000528739 TRBV6-7A0A0A0MS04 114 aa11.22□□□□□ -0.61
CAPN1-216ENST00000528739 IGHV7-81A0A0B4J1V7 117 aa11.22□□□□□ -0.61
CAPN1-216ENST00000528739 TRAV41A0A0B4J266 112 aa11.22□□□□□ -0.61
CAPN1-216ENST00000528739 TMEM235A6NFC5 223 aa11.22□□□□□ -0.61
CAPN1-216ENST00000528739 G3V318 75 aa11.22□□□□□ -0.61
CAPN1-216ENST00000528739 RBBP9O75884 186 aa11.22□□□□□ -0.61
CAPN1-216ENST00000528739 HLA-DRB1P01911 266 aa11.22□□□□□ -0.61
CAPN1-216ENST00000528739 ELANEP08246 267 aa11.22□□□□□ -0.61
CAPN1-216ENST00000528739 DTYMKP23919 212 aa11.22□□□□□ -0.61
CAPN1-216ENST00000528739 PITPNAQ00169 270 aa11.22□□□□□ -0.61
CAPN1-216ENST00000528739 FOXE3Q13461 319 aa11.22□□□□□ -0.61
CAPN1-216ENST00000528739 NPBQ8NG41 125 aa11.22□□□□□ -0.61
CAPN1-216ENST00000528739 OR5AN1Q8NGI8 311 aa11.22□□□□□ -0.61
CAPN1-216ENST00000528739 OR5H6Q8NGV6 325 aa11.22□□□□□ -0.61
CAPN1-216ENST00000528739 FLYWCH2Q96CP2 140 aaKnown RBP11.22□□□□□ -0.61
CAPN1-216ENST00000528739 TSNAXQ99598 290 aaKnown RBP11.22□□□□□ -0.61
CAPN1-216ENST00000528739 CABLES2Q9BTV7 478 aa11.22□□□□□ -0.61
CAPN1-216ENST00000528739 DIABLOQ9NR28 239 aa11.22□□□□□ -0.61
CAPN1-216ENST00000528739 NDUFA3O95167 84 aa11.21□□□□□ -0.61
CAPN1-216ENST00000528739 IGF1P05019 195 aa11.21□□□□□ -0.61
CAPN1-216ENST00000528739 MYCNOSP40205 109 aa11.21□□□□□ -0.61
CAPN1-216ENST00000528739 THBS3P49746 956 aa11.21□□□□□ -0.61
CAPN1-216ENST00000528739 PDPNQ86YL7 162 aa11.21□□□□□ -0.61
CAPN1-216ENST00000528739 MRPL41Q8IXM3 137 aaKnown RBP11.21□□□□□ -0.61
CAPN1-216ENST00000528739 ZNF383Q8NA42 475 aa11.21□□□□□ -0.61
CAPN1-216ENST00000528739 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.21□□□□□ -0.61
CAPN1-216ENST00000528739 WFDC9Q8NEX5 89 aa11.21□□□□□ -0.61
CAPN1-216ENST00000528739 RCC1LQ96I51 464 aaKnown RBP11.21□□□□□ -0.61
CAPN1-216ENST00000528739 RNF5Q99942 180 aa11.21□□□□□ -0.61
CAPN1-216ENST00000528739 SDHAF2Q9NX18 166 aa11.21□□□□□ -0.61
CAPN1-216ENST00000528739 ETV7Q9Y603 341 aa11.21□□□□□ -0.61
CAPN1-216ENST00000528739 IGKV1D-8A0A087WSZ0 117 aa11.2□□□□□ -0.62
CAPN1-216ENST00000528739 A0A1W2PN81 502 aa11.2□□□□□ -0.62
CAPN1-216ENST00000528739 CCL24O00175 119 aa11.2□□□□□ -0.62
CAPN1-216ENST00000528739 FCN1O00602 326 aa11.2□□□□□ -0.62
CAPN1-216ENST00000528739 IGHG4P01861 327 aa11.2□□□□□ -0.62
CAPN1-216ENST00000528739 IGKV1-16P04430 117 aa11.2□□□□□ -0.62
CAPN1-216ENST00000528739 FCER2P06734 321 aa11.2□□□□□ -0.62
CAPN1-216ENST00000528739 CTXN2P0C2S0 81 aa11.2□□□□□ -0.62
CAPN1-216ENST00000528739 NFYAP23511 347 aaPredicted RBP11.2□□□□□ -0.62
CAPN1-216ENST00000528739 SLC6A1P30531 599 aa11.2□□□□□ -0.62
CAPN1-216ENST00000528739 CHRNA7P36544 502 aa11.2□□□□□ -0.62
CAPN1-216ENST00000528739 TGFBR1P36897 503 aa11.2□□□□□ -0.62
CAPN1-216ENST00000528739 ARPC4P59998 168 aa11.2□□□□□ -0.62
CAPN1-216ENST00000528739 GNB1P62873 340 aa11.2□□□□□ -0.62
CAPN1-216ENST00000528739 CX3CL1P78423 397 aa11.2□□□□□ -0.62
CAPN1-216ENST00000528739 TMEM267Q0VDI3 215 aaPredicted RBP11.2□□□□□ -0.62
CAPN1-216ENST00000528739 PSG5Q15238 335 aa11.2□□□□□ -0.62
CAPN1-216ENST00000528739 SRSF7Q16629 238 aaKnown RBP eCLIP11.2□□□□□ -0.62
CAPN1-216ENST00000528739 RTL8BQ17RB0 113 aa11.2□□□□□ -0.62
CAPN1-216ENST00000528739 DEFB136Q30KP8 78 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms