RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 COLCA2A8K830 154 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 FABP5P3A8MUU1 101 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 SMKR1H3BMG3 65 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 J3KT08 172 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 M0R1B8 84 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 FKBP6O75344 327 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 APOA2P02652 100 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 HSPB1P04792 205 aaKnown RBP2.41□□□□□ -2.02
CD44-229ENST00000528672 REG1AP05451 166 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 GKN3PP0CG01 181 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 IGKV1-13P0DP09 117 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 HLA-EP13747 358 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 ZNF708P17019 499 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 GABRG2P18507 467 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 MYL12AP19105 171 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 EVI2AP22794 236 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 CRHBPP24387 322 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 RPA3P35244 121 aaPredicted RBP2.41□□□□□ -2.02
CD44-229ENST00000528672 GALR1P47211 349 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 CXCL12P48061 93 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 UBE2E1P51965 193 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 PPP1CBP62140 327 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 GNG5P63218 68 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 FZD2Q14332 565 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 JOSD1Q15040 202 aaPredicted RBP2.41□□□□□ -2.02
CD44-229ENST00000528672 SSX1Q16384 188 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 NRF1Q16656 503 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 IAH1Q2TAA2 248 aaPredicted RBP2.41□□□□□ -2.02
CD44-229ENST00000528672 FAM27D1Q5T7N8 215 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 LCN12Q6JVE5 192 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 ARL9Q6T311 187 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 FAM183BPQ6ZVS7 135 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 NEGR1Q7Z3B1 354 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 C1orf158Q8N1D5 194 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 ZNF433Q8N7K0 673 aaPredicted RBP2.41□□□□□ -2.02
CD44-229ENST00000528672 OR5A1Q8NGJ0 315 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 OR5AR1Q8NGP9 310 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 OR51Q1Q8NH59 317 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 TYMSOSQ8TAI1 123 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 ZNF675Q8TD23 568 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 RXFP4Q8TDU9 374 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 THEM6Q8WUY1 208 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 ISOC1Q96CN7 298 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 ZMYND19Q96E35 227 aaPredicted RBP2.41□□□□□ -2.02
CD44-229ENST00000528672 MALSU1Q96EH3 234 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 DYNLL2Q96FJ2 89 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 GALNT14Q96FL9 552 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 SLC35E1Q96K37 410 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 UBE2E2Q96LR5 201 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 OR2M4Q96R27 311 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 TRIB3Q96RU7 358 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 SMIM3Q9BZL3 60 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 ZNF436Q9C0F3 470 aaPredicted RBP2.41□□□□□ -2.02
CD44-229ENST00000528672 OR2J1Q9GZK6 312 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 FBXL15Q9H469 300 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 UQCC1Q9NVA1 299 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 TAS2R5Q9NYW4 299 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 CLCF1Q9UBD9 225 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 RPS6KB2Q9UBS0 482 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 SHPKQ9UHJ6 478 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 HDGFL3Q9Y3E1 203 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 AP4S1Q9Y587 144 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 TRAPPC8Q9Y2L5 1435 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 NFASCO94856 1347 aa2.41□□□□□ -2.02
CD44-229ENST00000528672 ADGRL2O95490 1459 aa2.4□□□□□ -2.02
CD44-229ENST00000528672 MLH3Q9UHC1 1453 aa2.4□□□□□ -2.02
CD44-229ENST00000528672 NALCNQ8IZF0 1738 aa2.4□□□□□ -2.02
CD44-229ENST00000528672 TMEM131LA2VDJ0 1609 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 PNMA8CA0A1B0GUJ8 204 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 SPAARA0A1B0GVQ0 90 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 TMEM269A0A1B0GVZ9 245 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 A0A1B0GW64 132 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 GABRPO00591 440 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 PDCD5O14737 125 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 SOX14O95416 240 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 ZNF682O95780 498 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 AIFM1O95831 613 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 MOSP00540 346 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 PMP2P02689 132 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 TTRP02766 147 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 IL3P08700 152 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 OR4Q2P0C623 313 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 OR5G3P0C626 314 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 P0C879 139 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 CD99P14209 185 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 MYL9P24844 172 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 MIPP30301 263 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 AGTR1P30556 359 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 GABRA3P34903 492 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 G6PCP35575 357 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 OR12D2P58182 307 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 DSCR10P59022 87 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 NCS1P62166 190 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 RPS25P62851 125 aaKnown RBP2.4□□□□□ -2.03
CD44-229ENST00000528672 BTG2P78543 158 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 GNA12Q03113 381 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 MEF2CQ06413 473 aaPredicted RBP2.4□□□□□ -2.03
CD44-229ENST00000528672 KIAA0087Q14695 138 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 OR7A5Q15622 319 aa2.4□□□□□ -2.03
CD44-229ENST00000528672 CLEC12BQ2HXU8 276 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms