RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 CBX3Q13185 183 aa8.81□□□□□ -1
CMTM1-211ENST00000528484 PSG5Q15238 335 aa8.81□□□□□ -1
CMTM1-211ENST00000528484 HMGN3Q15651 99 aa8.81□□□□□ -1
CMTM1-211ENST00000528484 RPL39P5Q59GN2 51 aa8.81□□□□□ -1
CMTM1-211ENST00000528484 RNLSQ5VYX0 342 aa8.81□□□□□ -1
CMTM1-211ENST00000528484 MOB1BQ7L9L4 216 aa8.81□□□□□ -1
CMTM1-211ENST00000528484 LAX1Q8IWV1 398 aa8.81□□□□□ -1
CMTM1-211ENST00000528484 OR5T1Q8NG75 326 aa8.81□□□□□ -1
CMTM1-211ENST00000528484 OR5AN1Q8NGI8 311 aa8.81□□□□□ -1
CMTM1-211ENST00000528484 OR13C5Q8NGS8 318 aa8.81□□□□□ -1
CMTM1-211ENST00000528484 THRSPQ92748 146 aa8.81□□□□□ -1
CMTM1-211ENST00000528484 FAM46BQ96A09 425 aa8.81□□□□□ -1
CMTM1-211ENST00000528484 FAM110AQ9BQ89 295 aa8.81□□□□□ -1
CMTM1-211ENST00000528484 UQCC2Q9BRT2 126 aa8.81□□□□□ -1
CMTM1-211ENST00000528484 HIPK2Q9H2X6 1198 aa8.81□□□□□ -1
CMTM1-211ENST00000528484 FGF20Q9NP95 211 aaPredicted RBP8.81□□□□□ -1
CMTM1-211ENST00000528484 TRAV8-7A0A075B6U6 113 aa8.8□□□□□ -1
CMTM1-211ENST00000528484 TRBV5-5A0A0J9YX44 114 aa8.8□□□□□ -1
CMTM1-211ENST00000528484 LOC100130705A0A1B0GUX0 176 aa8.8□□□□□ -1
CMTM1-211ENST00000528484 ITGB1BP1O14713 200 aa8.8□□□□□ -1
CMTM1-211ENST00000528484 OGG1O15527 345 aa8.8□□□□□ -1
CMTM1-211ENST00000528484 OR2A4O95047 310 aa8.8□□□□□ -1
CMTM1-211ENST00000528484 UBBP0CG47 229 aa8.8□□□□□ -1
CMTM1-211ENST00000528484 OR2G6Q5TZ20 316 aa8.8□□□□□ -1
CMTM1-211ENST00000528484 XAF1Q6GPH4 301 aa8.8□□□□□ -1
CMTM1-211ENST00000528484 PDPNQ86YL7 162 aa8.8□□□□□ -1
CMTM1-211ENST00000528484 CBR4Q8N4T8 237 aa8.8□□□□□ -1
CMTM1-211ENST00000528484 DYNLRB2Q8TF09 96 aa8.8□□□□□ -1
CMTM1-211ENST00000528484 PYDC1Q8WXC3 89 aa8.8□□□□□ -1
CMTM1-211ENST00000528484 SNAPC3Q92966 411 aa8.8□□□□□ -1
CMTM1-211ENST00000528484 ABHD14BQ96IU4 210 aa8.8□□□□□ -1
CMTM1-211ENST00000528484 USMG5Q96IX5 58 aa8.8□□□□□ -1
CMTM1-211ENST00000528484 OR14A2Q96R54 314 aa8.8□□□□□ -1
CMTM1-211ENST00000528484 PHB2Q99623 299 aa8.8□□□□□ -1
CMTM1-211ENST00000528484 NEURL2Q9BR09 285 aa8.8□□□□□ -1
CMTM1-211ENST00000528484 C9orf16Q9BUW7 83 aa8.8□□□□□ -1
CMTM1-211ENST00000528484 PLEKHA3Q9HB20 300 aa8.8□□□□□ -1
CMTM1-211ENST00000528484 RETNQ9HD89 108 aa8.8□□□□□ -1
CMTM1-211ENST00000528484 COA4Q9NYJ1 87 aa8.8□□□□□ -1
CMTM1-211ENST00000528484 ZNF221Q9UK13 617 aa8.8□□□□□ -1
CMTM1-211ENST00000528484 MGAT4AQ9UM21 535 aa8.8□□□□□ -1
CMTM1-211ENST00000528484 EXOSC1Q9Y3B2 195 aaKnown RBP8.8□□□□□ -1
CMTM1-211ENST00000528484 A0A1W2PPK0 400 aa8.79□□□□□ -1
CMTM1-211ENST00000528484 ZBTB25P24278 435 aa8.79□□□□□ -1
CMTM1-211ENST00000528484 MAPK3P27361 379 aaPredicted RBP8.79□□□□□ -1
CMTM1-211ENST00000528484 ETV1P50549 477 aa8.79□□□□□ -1
CMTM1-211ENST00000528484 TAS2R43P59537 309 aa8.79□□□□□ -1
CMTM1-211ENST00000528484 ZFP1Q6P2D0 407 aa8.79□□□□□ -1
CMTM1-211ENST00000528484 C10orf67Q8IYJ2 551 aa8.79□□□□□ -1
CMTM1-211ENST00000528484 BVESQ8NE79 360 aa8.79□□□□□ -1
CMTM1-211ENST00000528484 ZNF555Q8NEP9 628 aa8.79□□□□□ -1
CMTM1-211ENST00000528484 DDB2Q92466 427 aa8.79□□□□□ -1
CMTM1-211ENST00000528484 SLC29A1Q99808 456 aa8.79□□□□□ -1
CMTM1-211ENST00000528484 RIMS4Q9H426 269 aaPredicted RBP8.79□□□□□ -1
CMTM1-211ENST00000528484 KMT2AQ03164 3969 aa8.79□□□□□ -1
CMTM1-211ENST00000528484 H3BNX3 289 aa8.78□□□□□ -1
CMTM1-211ENST00000528484 MPPED1O15442 326 aa8.78□□□□□ -1
CMTM1-211ENST00000528484 LY6G6CO95867 125 aa8.78□□□□□ -1
CMTM1-211ENST00000528484 CSN3P07498 182 aa8.78□□□□□ -1
CMTM1-211ENST00000528484 CEACAM6P40199 344 aa8.78□□□□□ -1
CMTM1-211ENST00000528484 SIGIRRQ6IA17 410 aa8.78□□□□□ -1
CMTM1-211ENST00000528484 ZNF343Q6P1L6 599 aa8.78□□□□□ -1
CMTM1-211ENST00000528484 SVOPQ8N4V2 548 aa8.78□□□□□ -1
CMTM1-211ENST00000528484 LINC00476Q8WZB0 136 aa8.78□□□□□ -1
CMTM1-211ENST00000528484 SULT4A1Q9BR01 284 aa8.78□□□□□ -1
CMTM1-211ENST00000528484 THAP7Q9BT49 309 aaPredicted RBP8.78□□□□□ -1
CMTM1-211ENST00000528484 FAAP24Q9BTP7 215 aa8.78□□□□□ -1
CMTM1-211ENST00000528484 TMEM59Q9BXS4 323 aa8.78□□□□□ -1
CMTM1-211ENST00000528484 TINAGL1Q9GZM7 467 aaPredicted RBP8.78□□□□□ -1
CMTM1-211ENST00000528484 TRBV5-7A0A0A0MS05 114 aa8.77□□□□□ -1.01
CMTM1-211ENST00000528484 TUSC2O75896 110 aa8.77□□□□□ -1.01
CMTM1-211ENST00000528484 BRI3O95415 125 aa8.77□□□□□ -1.01
CMTM1-211ENST00000528484 IGKV1-16P04430 117 aa8.77□□□□□ -1.01
CMTM1-211ENST00000528484 GUCA2BQ16661 112 aa8.77□□□□□ -1.01
CMTM1-211ENST00000528484 FAM209BQ5JX69 171 aa8.77□□□□□ -1.01
CMTM1-211ENST00000528484 TTC23Q5W5X9 447 aa8.77□□□□□ -1.01
CMTM1-211ENST00000528484 IL34Q6ZMJ4 242 aa8.77□□□□□ -1.01
CMTM1-211ENST00000528484 SLC16A13Q7RTY0 426 aa8.77□□□□□ -1.01
CMTM1-211ENST00000528484 C6orf201Q7Z4U5 140 aa8.77□□□□□ -1.01
CMTM1-211ENST00000528484 C5orf24Q7Z6I8 188 aa8.77□□□□□ -1.01
CMTM1-211ENST00000528484 DRAXINQ8NBI3 349 aaPredicted RBP8.77□□□□□ -1.01
CMTM1-211ENST00000528484 KCNG3Q8TAE7 436 aa8.77□□□□□ -1.01
CMTM1-211ENST00000528484 KCTD12Q96CX2 325 aaKnown RBP8.77□□□□□ -1.01
CMTM1-211ENST00000528484 SRD5A3Q9H8P0 318 aa8.77□□□□□ -1.01
CMTM1-211ENST00000528484 SLC35D1Q9NTN3 355 aa8.77□□□□□ -1.01
CMTM1-211ENST00000528484 PLEKHJ1Q9NW61 149 aa8.77□□□□□ -1.01
CMTM1-211ENST00000528484 DIMT1Q9UNQ2 313 aaKnown RBP8.77□□□□□ -1.01
CMTM1-211ENST00000528484 PNMA8CA0A1B0GUJ8 204 aa8.76□□□□□ -1.01
CMTM1-211ENST00000528484 IZUMO1RA6ND01 250 aa8.76□□□□□ -1.01
CMTM1-211ENST00000528484 RBMY1BA6NDE4 496 aaKnown RBP8.76□□□□□ -1.01
CMTM1-211ENST00000528484 CXorf65A6NEN9 183 aa8.76□□□□□ -1.01
CMTM1-211ENST00000528484 RBMY1EA6NEQ0 496 aaKnown RBP8.76□□□□□ -1.01
CMTM1-211ENST00000528484 OR11H12B2RN74 326 aa8.76□□□□□ -1.01
CMTM1-211ENST00000528484 DYNC1I1O14576 645 aa8.76□□□□□ -1.01
CMTM1-211ENST00000528484 RBMY1DP0C7P1 496 aaKnown RBP8.76□□□□□ -1.01
CMTM1-211ENST00000528484 MAP2K4P45985 399 aa8.76□□□□□ -1.01
CMTM1-211ENST00000528484 RPS11P62280 158 aaKnown RBP eCLIP8.76□□□□□ -1.01
CMTM1-211ENST00000528484 HLA-DRB3P79483 266 aa8.76□□□□□ -1.01
CMTM1-211ENST00000528484 GLT8D1Q68CQ7 371 aa8.76□□□□□ -1.01
CMTM1-211ENST00000528484 DEFB125Q8N687 156 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms