RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 SGPP2Q8IWX5 399 aa18.04■□□□□ 0.48
CPSF1-202ENST00000527827 RSRP1Q9BUV0 290 aa18.04■□□□□ 0.48
CPSF1-202ENST00000527827 ITGB1BP1O14713 200 aa18.03■□□□□ 0.48
CPSF1-202ENST00000527827 PROP1O75360 226 aa18.03■□□□□ 0.48
CPSF1-202ENST00000527827 TRGV3P03979 118 aa18.03■□□□□ 0.48
CPSF1-202ENST00000527827 TFAP2AP05549 437 aa18.03■□□□□ 0.48
CPSF1-202ENST00000527827 UBBP0CG47 229 aa18.03■□□□□ 0.48
CPSF1-202ENST00000527827 VEGFCP49767 419 aa18.03■□□□□ 0.48
CPSF1-202ENST00000527827 ADAMTSL5Q6ZMM2 481 aa18.03■□□□□ 0.48
CPSF1-202ENST00000527827 NICN1Q9BSH3 213 aa18.03■□□□□ 0.48
CPSF1-202ENST00000527827 EFCAB10A6NFE3 127 aa18.02■□□□□ 0.48
CPSF1-202ENST00000527827 CD40LGP29965 261 aa18.02■□□□□ 0.48
CPSF1-202ENST00000527827 TM2D1Q9BX74 207 aa18.02■□□□□ 0.48
CPSF1-202ENST00000527827 TMEM59Q9BXS4 323 aa18.02■□□□□ 0.48
CPSF1-202ENST00000527827 CHMP1AQ9HD42 196 aaPredicted RBP18.02■□□□□ 0.48
CPSF1-202ENST00000527827 MAPK3P27361 379 aaPredicted RBP18.01■□□□□ 0.47
CPSF1-202ENST00000527827 UNC119Q13432 240 aa18.01■□□□□ 0.47
CPSF1-202ENST00000527827 INSL4Q14641 139 aa18.01■□□□□ 0.47
CPSF1-202ENST00000527827 C1orf100Q5SVJ3 147 aa18.01■□□□□ 0.47
CPSF1-202ENST00000527827 LRRTM1Q86UE6 522 aa18.01■□□□□ 0.47
CPSF1-202ENST00000527827 DRAXINQ8NBI3 349 aaPredicted RBP18.01■□□□□ 0.47
CPSF1-202ENST00000527827 SETD6Q8TBK2 473 aa18.01■□□□□ 0.47
CPSF1-202ENST00000527827 CYGBQ8WWM9 190 aa18.01■□□□□ 0.47
CPSF1-202ENST00000527827 THRSPQ92748 146 aa18.01■□□□□ 0.47
CPSF1-202ENST00000527827 C11orf54Q9H0W9 315 aaPredicted RBP18.01■□□□□ 0.47
CPSF1-202ENST00000527827 KCNK15Q9H427 330 aa18.01■□□□□ 0.47
CPSF1-202ENST00000527827 RANGRFQ9HD47 186 aaPredicted RBP18.01■□□□□ 0.47
CPSF1-202ENST00000527827 OR1A1Q9P1Q5 309 aa18.01■□□□□ 0.47
CPSF1-202ENST00000527827 SLC22A1O15245 554 aa18■□□□□ 0.47
CPSF1-202ENST00000527827 IGKV1-16P04430 117 aa18■□□□□ 0.47
CPSF1-202ENST00000527827 ARSBP15848 533 aa18■□□□□ 0.47
CPSF1-202ENST00000527827 ZP3P21754 424 aa18■□□□□ 0.47
CPSF1-202ENST00000527827 LINC00205P59089 165 aa18■□□□□ 0.47
CPSF1-202ENST00000527827 HAGHQ16775 308 aa18■□□□□ 0.47
CPSF1-202ENST00000527827 IL34Q6ZMJ4 242 aa18■□□□□ 0.47
CPSF1-202ENST00000527827 MOB1BQ7L9L4 216 aa18■□□□□ 0.47
CPSF1-202ENST00000527827 SPATA25Q9BR10 227 aa18■□□□□ 0.47
CPSF1-202ENST00000527827 A0A0A6YYD4 124 aa17.99■□□□□ 0.47
CPSF1-202ENST00000527827 TRBV6-6A0A0A6YYG2 114 aa17.99■□□□□ 0.47
CPSF1-202ENST00000527827 SPDEFO95238 335 aa17.99■□□□□ 0.47
CPSF1-202ENST00000527827 CEACAM6P40199 344 aa17.99■□□□□ 0.47
CPSF1-202ENST00000527827 WNT4P56705 351 aa17.99■□□□□ 0.47
CPSF1-202ENST00000527827 SSBP2P81877 361 aaPredicted RBP17.99■□□□□ 0.47
CPSF1-202ENST00000527827 KLF5Q13887 457 aaPredicted RBP17.99■□□□□ 0.47
CPSF1-202ENST00000527827 FXYD3Q14802 87 aa17.99■□□□□ 0.47
CPSF1-202ENST00000527827 TTC23Q5W5X9 447 aa17.99■□□□□ 0.47
CPSF1-202ENST00000527827 ZNF383Q8NA42 475 aa17.99■□□□□ 0.47
CPSF1-202ENST00000527827 POC5Q8NA72 575 aa17.99■□□□□ 0.47
CPSF1-202ENST00000527827 SETD9Q8NE22 299 aa17.99■□□□□ 0.47
CPSF1-202ENST00000527827 GRPEL2Q8TAA5 225 aa17.99■□□□□ 0.47
CPSF1-202ENST00000527827 TSNAXQ99598 290 aaKnown RBP17.99■□□□□ 0.47
CPSF1-202ENST00000527827 HDHD3Q9BSH5 251 aaPredicted RBP17.99■□□□□ 0.47
CPSF1-202ENST00000527827 ZNF355PQ9NSJ1 428 aa17.99■□□□□ 0.47
CPSF1-202ENST00000527827 C13orf42A0A1B0GVH6 325 aa17.98■□□□□ 0.47
CPSF1-202ENST00000527827 ANKRD34BA5PLL1 514 aa17.98■□□□□ 0.47
CPSF1-202ENST00000527827 CPEP16870 476 aa17.98■□□□□ 0.47
CPSF1-202ENST00000527827 RPS16P62249 146 aaKnown RBP17.98■□□□□ 0.47
CPSF1-202ENST00000527827 QRFPP83859 136 aa17.98■□□□□ 0.47
CPSF1-202ENST00000527827 LAIR2Q6ISS4 152 aa17.98■□□□□ 0.47
CPSF1-202ENST00000527827 OR5T1Q8NG75 326 aa17.98■□□□□ 0.47
CPSF1-202ENST00000527827 KCNG3Q8TAE7 436 aa17.98■□□□□ 0.47
CPSF1-202ENST00000527827 EDARADDQ8WWZ3 215 aa17.98■□□□□ 0.47
CPSF1-202ENST00000527827 THAP7Q9BT49 309 aaPredicted RBP17.98■□□□□ 0.47
CPSF1-202ENST00000527827 TMEM14DPA8MWL7 114 aa17.97■□□□□ 0.47
CPSF1-202ENST00000527827 H3BUA1 57 aa17.97■□□□□ 0.47
CPSF1-202ENST00000527827 MYL12BO14950 172 aa17.97■□□□□ 0.47
CPSF1-202ENST00000527827 ZBTB25P24278 435 aa17.97■□□□□ 0.47
CPSF1-202ENST00000527827 HLA-DRB3P79483 266 aa17.97■□□□□ 0.47
CPSF1-202ENST00000527827 ACSM3Q53FZ2 586 aa17.97■□□□□ 0.47
CPSF1-202ENST00000527827 GLT8D1Q68CQ7 371 aa17.97■□□□□ 0.47
CPSF1-202ENST00000527827 OR9G4Q8NGQ1 327 aa17.97■□□□□ 0.47
CPSF1-202ENST00000527827 PTX4Q96A99 478 aa17.97■□□□□ 0.47
CPSF1-202ENST00000527827 PLEKHJ1Q9NW61 149 aa17.97■□□□□ 0.47
CPSF1-202ENST00000527827 PSORS1C1Q9UIG5 152 aa17.97■□□□□ 0.47
CPSF1-202ENST00000527827 AK3Q9UIJ7 227 aa17.97■□□□□ 0.47
CPSF1-202ENST00000527827 HYDINQ4G0P3 5121 aa17.97■□□□□ 0.47
CPSF1-202ENST00000527827 SLC25A17O43808 307 aa17.96■□□□□ 0.47
CPSF1-202ENST00000527827 MOGAT2Q3SYC2 334 aa17.96■□□□□ 0.47
CPSF1-202ENST00000527827 PDPNQ86YL7 162 aa17.96■□□□□ 0.47
CPSF1-202ENST00000527827 NANOGP1Q8N7R0 232 aa17.96■□□□□ 0.47
CPSF1-202ENST00000527827 RIMS4Q9H426 269 aaPredicted RBP17.96■□□□□ 0.47
CPSF1-202ENST00000527827 ADAM30Q9UKF2 790 aa17.96■□□□□ 0.47
CPSF1-202ENST00000527827 A0A0G2JLM5 398 aa17.95■□□□□ 0.46
CPSF1-202ENST00000527827 H0Y980 276 aa17.95■□□□□ 0.46
CPSF1-202ENST00000527827 SCTP09683 121 aa17.95■□□□□ 0.46
CPSF1-202ENST00000527827 CD37P11049 281 aa17.95■□□□□ 0.46
CPSF1-202ENST00000527827 SYNJ2BPP57105 145 aa17.95■□□□□ 0.46
CPSF1-202ENST00000527827 RBM48Q5RL73 367 aaKnown RBP17.95■□□□□ 0.46
CPSF1-202ENST00000527827 AHSA2Q719I0 299 aa17.95■□□□□ 0.46
CPSF1-202ENST00000527827 PHYHIPQ92561 330 aa17.95■□□□□ 0.46
CPSF1-202ENST00000527827 LPAR5Q9H1C0 372 aa17.95■□□□□ 0.46
CPSF1-202ENST00000527827 SOCS1O15524 211 aa17.94■□□□□ 0.46
CPSF1-202ENST00000527827 IGLV2-23P01705 113 aa17.94■□□□□ 0.46
CPSF1-202ENST00000527827 DEFA5Q01523 94 aa17.94■□□□□ 0.46
CPSF1-202ENST00000527827 PJVKQ0ZLH3 352 aa17.94■□□□□ 0.46
CPSF1-202ENST00000527827 DHRSXQ8N5I4 330 aa17.94■□□□□ 0.46
CPSF1-202ENST00000527827 Q9N2K0 584 aa17.94■□□□□ 0.46
CPSF1-202ENST00000527827 ZNF221Q9UK13 617 aa17.94■□□□□ 0.46
CPSF1-202ENST00000527827 IGKV1-6A0A0C4DH72 117 aa17.93■□□□□ 0.46
CPSF1-202ENST00000527827 CRYGBP07316 175 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms