RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 GLT8D1Q68CQ7 371 aa10.95□□□□□ -0.66
CPSF1-201ENST00000526271 RAB12Q6IQ22 244 aa10.95□□□□□ -0.66
CPSF1-201ENST00000526271 CLVS1Q8IUQ0 354 aaPredicted RBP10.95□□□□□ -0.66
CPSF1-201ENST00000526271 S100A13Q99584 98 aa10.95□□□□□ -0.66
CPSF1-201ENST00000526271 BCL7BQ9BQE9 202 aa10.95□□□□□ -0.66
CPSF1-201ENST00000526271 UQCC2Q9BRT2 126 aa10.95□□□□□ -0.66
CPSF1-201ENST00000526271 BANF2Q9H503 90 aa10.95□□□□□ -0.66
CPSF1-201ENST00000526271 TAF9BQ9HBM6 251 aa10.95□□□□□ -0.66
CPSF1-201ENST00000526271 ETAA1Q9NY74 926 aa10.95□□□□□ -0.66
CPSF1-201ENST00000526271 KIAA1456Q9P272 454 aa10.95□□□□□ -0.66
CPSF1-201ENST00000526271 NUBP2Q9Y5Y2 271 aa10.95□□□□□ -0.66
CPSF1-201ENST00000526271 CEPT1Q9Y6K0 416 aa10.95□□□□□ -0.66
CPSF1-201ENST00000526271 SAA2-SAA4A0A096LPE2 208 aa10.94□□□□□ -0.66
CPSF1-201ENST00000526271 LINC01619G3V211 115 aa10.94□□□□□ -0.66
CPSF1-201ENST00000526271 NBR2O15453 112 aa10.94□□□□□ -0.66
CPSF1-201ENST00000526271 PROP1O75360 226 aa10.94□□□□□ -0.66
CPSF1-201ENST00000526271 IGHV3-11P01762 117 aa10.94□□□□□ -0.66
CPSF1-201ENST00000526271 CSTBP04080 98 aaKnown RBP10.94□□□□□ -0.66
CPSF1-201ENST00000526271 LGALS1P09382 135 aaKnown RBP10.94□□□□□ -0.66
CPSF1-201ENST00000526271 SAA2P0DJI9 122 aaPredicted RBP10.94□□□□□ -0.66
CPSF1-201ENST00000526271 OR5H8P0DN80 308 aa10.94□□□□□ -0.66
CPSF1-201ENST00000526271 IGHV4-30-4P0DP06 118 aa10.94□□□□□ -0.66
CPSF1-201ENST00000526271 RAB3BP20337 219 aa10.94□□□□□ -0.66
CPSF1-201ENST00000526271 SDC2P34741 201 aa10.94□□□□□ -0.66
CPSF1-201ENST00000526271 LSM3P62310 102 aaKnown RBP10.94□□□□□ -0.66
CPSF1-201ENST00000526271 SSBP2P81877 361 aaPredicted RBP10.94□□□□□ -0.66
CPSF1-201ENST00000526271 SRSF7Q16629 238 aaKnown RBP eCLIP10.94□□□□□ -0.66
CPSF1-201ENST00000526271 ECSCRQ19T08 205 aa10.94□□□□□ -0.66
CPSF1-201ENST00000526271 STEAP3Q658P3 488 aa10.94□□□□□ -0.66
CPSF1-201ENST00000526271 NR2C2APQ86WQ0 139 aa10.94□□□□□ -0.66
CPSF1-201ENST00000526271 NEK7Q8TDX7 302 aa10.94□□□□□ -0.66
CPSF1-201ENST00000526271 THAP7Q9BT49 309 aaPredicted RBP10.94□□□□□ -0.66
CPSF1-201ENST00000526271 KRTAP17-1Q9BYP8 105 aa10.94□□□□□ -0.66
CPSF1-201ENST00000526271 OR2S2Q9NQN1 319 aa10.94□□□□□ -0.66
CPSF1-201ENST00000526271 TRAPPC2LQ9UL33 140 aa10.94□□□□□ -0.66
CPSF1-201ENST00000526271 V9GY05 133 aa10.94□□□□□ -0.66
CPSF1-201ENST00000526271 A0A1W2PN81 502 aa10.93□□□□□ -0.66
CPSF1-201ENST00000526271 SLC22A1O15245 554 aa10.93□□□□□ -0.66
CPSF1-201ENST00000526271 GTF2F2P13984 249 aa10.93□□□□□ -0.66
CPSF1-201ENST00000526271 CHRNA7P36544 502 aa10.93□□□□□ -0.66
CPSF1-201ENST00000526271 VBP1P61758 197 aa10.93□□□□□ -0.66
CPSF1-201ENST00000526271 NCS1P62166 190 aa10.93□□□□□ -0.66
CPSF1-201ENST00000526271 CX3CL1P78423 397 aa10.93□□□□□ -0.66
CPSF1-201ENST00000526271 GLIPR1L1Q6UWM5 242 aa10.93□□□□□ -0.66
CPSF1-201ENST00000526271 GLDNQ6ZMI3 551 aaPredicted RBP10.93□□□□□ -0.66
CPSF1-201ENST00000526271 IL34Q6ZMJ4 242 aa10.93□□□□□ -0.66
CPSF1-201ENST00000526271 JAGN1Q8N5M9 183 aa10.93□□□□□ -0.66
CPSF1-201ENST00000526271 RAB2BQ8WUD1 216 aa10.93□□□□□ -0.66
CPSF1-201ENST00000526271 Q96M66 194 aa10.93□□□□□ -0.66
CPSF1-201ENST00000526271 FAM103A1Q9BTL3 118 aaKnown RBP10.93□□□□□ -0.66
CPSF1-201ENST00000526271 ABHD14AQ9BUJ0 271 aa10.93□□□□□ -0.66
CPSF1-201ENST00000526271 RBM38Q9H0Z9 239 aaKnown RBP10.93□□□□□ -0.66
CPSF1-201ENST00000526271 FBXL15Q9H469 300 aa10.93□□□□□ -0.66
CPSF1-201ENST00000526271 MRPS28Q9Y2Q9 187 aaKnown RBP10.93□□□□□ -0.66
CPSF1-201ENST00000526271 PEX16Q9Y5Y5 336 aa10.93□□□□□ -0.66
CPSF1-201ENST00000526271 UBE2QL1A1L167 161 aa10.92□□□□□ -0.66
CPSF1-201ENST00000526271 A8MZ25 164 aa10.92□□□□□ -0.66
CPSF1-201ENST00000526271 SLC17A2O00624 439 aa10.92□□□□□ -0.66
CPSF1-201ENST00000526271 SPINT2O43291 252 aa10.92□□□□□ -0.66
CPSF1-201ENST00000526271 IGLV1-51P01701 117 aa10.92□□□□□ -0.66
CPSF1-201ENST00000526271 CLEC2LP0C7M8 214 aa10.92□□□□□ -0.66
CPSF1-201ENST00000526271 CT45A6P0DMU7 189 aa10.92□□□□□ -0.66
CPSF1-201ENST00000526271 CT45A5P0DMU8 189 aa10.92□□□□□ -0.66
CPSF1-201ENST00000526271 CT45A7P0DMV0 189 aa10.92□□□□□ -0.66
CPSF1-201ENST00000526271 RPS19P39019 145 aaKnown RBP10.92□□□□□ -0.66
CPSF1-201ENST00000526271 OR10A3P58181 314 aa10.92□□□□□ -0.66
CPSF1-201ENST00000526271 LINC00205P59089 165 aa10.92□□□□□ -0.66
CPSF1-201ENST00000526271 C6orf183Q5T699 404 aa10.92□□□□□ -0.66
CPSF1-201ENST00000526271 LIN54Q6MZP7 749 aa10.92□□□□□ -0.66
CPSF1-201ENST00000526271 TMEM65Q6PI78 240 aa10.92□□□□□ -0.66
CPSF1-201ENST00000526271 FAM131AQ6UXB0 335 aa10.92□□□□□ -0.66
CPSF1-201ENST00000526271 RHOVQ96L33 236 aa10.92□□□□□ -0.66
CPSF1-201ENST00000526271 GHRLQ9UBU3 117 aa10.92□□□□□ -0.66
CPSF1-201ENST00000526271 ADAM30Q9UKF2 790 aa10.92□□□□□ -0.66
CPSF1-201ENST00000526271 SMIM31A0A1B0GVY4 71 aa10.91□□□□□ -0.66
CPSF1-201ENST00000526271 DPPA5A6NC42 116 aa10.91□□□□□ -0.66
CPSF1-201ENST00000526271 IFITM5A6NNB3 132 aa10.91□□□□□ -0.66
CPSF1-201ENST00000526271 NOTOA8MTQ0 251 aa10.91□□□□□ -0.66
CPSF1-201ENST00000526271 MCRIP1C9JLW8 97 aa10.91□□□□□ -0.66
CPSF1-201ENST00000526271 ST8SIA5O15466 376 aa10.91□□□□□ -0.66
CPSF1-201ENST00000526271 ZNF780AO75290 641 aaPredicted RBP10.91□□□□□ -0.66
CPSF1-201ENST00000526271 HTR2CP28335 458 aa10.91□□□□□ -0.66
CPSF1-201ENST00000526271 HMGN3Q15651 99 aa10.91□□□□□ -0.66
CPSF1-201ENST00000526271 RPL39P5Q59GN2 51 aa10.91□□□□□ -0.66
CPSF1-201ENST00000526271 LY6G6FQ5SQ64 297 aa10.91□□□□□ -0.66
CPSF1-201ENST00000526271 OR6M1Q8NGM8 313 aa10.91□□□□□ -0.66
CPSF1-201ENST00000526271 ISOC1Q96CN7 298 aa10.91□□□□□ -0.66
CPSF1-201ENST00000526271 SULT4A1Q9BR01 284 aa10.91□□□□□ -0.66
CPSF1-201ENST00000526271 NDUFA13Q9P0J0 144 aa10.91□□□□□ -0.66
CPSF1-201ENST00000526271 JPT1Q9UK76 154 aa10.91□□□□□ -0.66
CPSF1-201ENST00000526271 FOXA2Q9Y261 457 aaPredicted RBP10.91□□□□□ -0.66
CPSF1-201ENST00000526271 A3GALT2U3KPV4 340 aa10.91□□□□□ -0.66
CPSF1-201ENST00000526271 DNAH10Q8IVF4 4471 aa10.9□□□□□ -0.66
CPSF1-201ENST00000526271 ZNF701M0R085 212 aaPredicted RBP10.9□□□□□ -0.66
CPSF1-201ENST00000526271 RRHO14718 337 aa10.9□□□□□ -0.66
CPSF1-201ENST00000526271 YPEL1O60688 119 aa10.9□□□□□ -0.66
CPSF1-201ENST00000526271 TMEM127O75204 238 aa10.9□□□□□ -0.66
CPSF1-201ENST00000526271 RBMXL2O75526 392 aaKnown RBP10.9□□□□□ -0.66
CPSF1-201ENST00000526271 UBBP0CG47 229 aa10.9□□□□□ -0.66
CPSF1-201ENST00000526271 MGMTP16455 207 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms