RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 ZNF404Q494X3 552 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 NHLRC3Q5JS37 347 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 SPIN3Q5JUX0 258 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 ATAD3CQ5T2N8 411 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 AVPI1Q5T686 147 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 TEX36Q5VZQ5 186 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 SLC36A1Q7Z2H8 476 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 TRPT1Q86TN4 253 aaKnown RBP3.64□□□□□ -1.83
USP48-211ENST00000526044 LINC00596Q86U02 117 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 FAM89BQ8N5H3 189 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 ZNF525Q8N782 197 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 SAMD12Q8N8I0 201 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 CHST4Q8NCG5 386 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 TMEM104Q8NE00 496 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 OR5D13Q8NGL4 314 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 LGALS14Q8TCE9 139 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 SEH1LQ96EE3 360 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 C1orf147Q96MC9 270 aaPredicted RBP3.64□□□□□ -1.83
USP48-211ENST00000526044 MS4A10Q96PG2 267 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 SPAG8Q99932 426 aaPredicted RBP3.64□□□□□ -1.83
USP48-211ENST00000526044 TMEM246Q9BRR3 403 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 TM2D1Q9BX74 207 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 TMEM59Q9BXS4 323 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 SLIRPQ9GZT3 109 aaKnown RBP3.64□□□□□ -1.83
USP48-211ENST00000526044 C6orf62Q9GZU0 229 aaPredicted RBP3.64□□□□□ -1.83
USP48-211ENST00000526044 NXF2Q9GZY0 626 aaKnown RBP3.64□□□□□ -1.83
USP48-211ENST00000526044 DNTTIP1Q9H147 329 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 LPAR5Q9H1C0 372 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 ZNF665Q9H7R5 613 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 HES4Q9HCC6 221 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 CHMP1AQ9HD42 196 aaPredicted RBP3.64□□□□□ -1.83
USP48-211ENST00000526044 RDH8Q9NYR8 311 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 PTTG2Q9NZH5 202 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 FOXA2Q9Y261 457 aaPredicted RBP3.64□□□□□ -1.83
USP48-211ENST00000526044 WIPI2Q9Y4P8 454 aa3.64□□□□□ -1.83
USP48-211ENST00000526044 DOPEY1Q5JWR5 2465 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 ABCA4P78363 2273 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 IGKV1D-17A0A075B6S4 117 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 TRAV18A0A075B6X5 111 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 A0A0A6YYH2 397 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 TMEM89A2RUT3 159 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 FABP12A6NFH5 140 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 NKX6-3A6NJ46 265 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 A6NJ64 397 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.63□□□□□ -1.83
USP48-211ENST00000526044 GEMIN2O14893 280 aaKnown RBP3.63□□□□□ -1.83
USP48-211ENST00000526044 SOCS1O15524 211 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 XRCC3O43542 346 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 NDUFB3O43676 98 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 GPR137BO60478 399 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 ATP6V1G1O75348 118 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 SCGNO76038 276 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 OR7C1O76099 320 aaPredicted RBP3.63□□□□□ -1.83
USP48-211ENST00000526044 OR2H2O95918 312 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 HAND1O96004 215 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 IGHV2-70P01814 119 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 GLAP06280 429 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 CRYGCP07315 174 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 WNT2P09544 360 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 VPREB1P12018 145 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 ZNF44P15621 663 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 ELK1P19419 428 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 FUT3P21217 361 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 BLVRBP30043 206 aaPredicted RBP3.63□□□□□ -1.83
USP48-211ENST00000526044 TALDO1P37837 337 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 EFNB2P52799 333 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 TMEM50BP56557 158 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 RBM11P57052 281 aaKnown RBP3.63□□□□□ -1.83
USP48-211ENST00000526044 PLA2G7Q13093 441 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 UNC119Q13432 240 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 IL18Q14116 193 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 ARL6IP1Q15041 203 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 AANATQ16613 207 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 MPV17LQ2QL34 196 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 TMEM30BQ3MIR4 351 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 CDNFQ49AH0 187 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 TMEM155Q4W5P6 130 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 UBE2NLQ5JXB2 153 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 STUMQ69YW2 141 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 Q6P435 159 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 LYPD2Q6UXB3 125 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 RBMS3Q6XE24 437 aaKnown RBP3.63□□□□□ -1.83
USP48-211ENST00000526044 NRARPQ7Z6K4 114 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 ZNF561Q8N587 486 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 SPICQ8N5J4 248 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 CD177Q8N6Q3 437 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 SUMF2Q8NBJ7 301 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 OR10R2Q8NGX6 335 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 OR4A16Q8NH70 328 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 ANGPTL6Q8NI99 470 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 C10orf105Q8TEF2 133 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 FCAMRQ8WWV6 532 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 RAB3CQ96E17 227 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 DIRAS2Q96HU8 199 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 NEDD4LQ96PU5 975 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 CCL13Q99616 98 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 FOXC2Q99958 501 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 FAAP24Q9BTP7 215 aa3.63□□□□□ -1.83
USP48-211ENST00000526044 ABCG5Q9H222 651 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms